Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

Click here to switch to the map view.

The map label for this gene is 71907711

Identifier: 71907711

GI number: 71907711

Start: 2244309

End: 2244746

Strand: Reverse

Name: 71907711

Synonym: Daro_2085

Alternate gene names: NA

Gene position: 2244746-2244309 (Counterclockwise)

Preceding gene: 71907712

Following gene: 71907710

Centisome position: 49.87

GC content: 59.36

Gene sequence:

>438_bases
ATGAAATTATTCCTGCTTGCAGTGTTACTGGCTGCCGCATCGGCGCCGACACGGGCTGCCGATGTCGGTGTATCGGTCAG
TGTTGGTCAGCCCGGCTTTTATGGCCGTCTCGATATCGGTGATTATCCGCAACCGCAACTGCTCTATCAGCAGCCACGGA
TGATCGAGCGCGTTCCAGAGGGGCGTCCGCCGGTCTATATGCGTGTGCCGCCTGGGCATGCCAGGAACTGGCGCCGGCAT
TGTTCCGCCTACAACGCCTGTGACGAGCGGGTCTATTTTGTTCGCGATGGCTGGTACAACAACCAGTACGTCCCGCGTTA
CCGGGAGCAAAACCGTTACCGTGATGACGGACGTCATGATGGACGCCGCGATGATCATCGCGGGTACAACCGGGATGACC
ACCAACGGGGTGGTGATGACCGTGGTCAGCGTCGGTGA

Upstream 100 bases:

>100_bases
GAAAAAGCGGGTCAGCAGATCGAGAAAGCCGGCAACAAGATTCAGGATGCCGCTCAGGGCGACAAGAAATAGGCTGGGCA
ACGGACAAAGGAGTTTCAGC

Downstream 100 bases:

>100_bases
GGCCAGCCATGACTAATCTCGCAGCAGTCTCTGTCGGCAAGGCGCAAACGCGCCATGGTCGCCTTGGGGTCATTGCCATG
GTGCTGGCCTTGCAATGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MKLFLLAVLLAAASAPTRAADVGVSVSVGQPGFYGRLDIGDYPQPQLLYQQPRMIERVPEGRPPVYMRVPPGHARNWRRH
CSAYNACDERVYFVRDGWYNNQYVPRYREQNRYRDDGRHDGRRDDHRGYNRDDHQRGGDDRGQRR

Sequences:

>Translated_145_residues
MKLFLLAVLLAAASAPTRAADVGVSVSVGQPGFYGRLDIGDYPQPQLLYQQPRMIERVPEGRPPVYMRVPPGHARNWRRH
CSAYNACDERVYFVRDGWYNNQYVPRYREQNRYRDDGRHDGRRDDHRGYNRDDHQRGGDDRGQRR
>Mature_145_residues
MKLFLLAVLLAAASAPTRAADVGVSVSVGQPGFYGRLDIGDYPQPQLLYQQPRMIERVPEGRPPVYMRVPPGHARNWRRH
CSAYNACDERVYFVRDGWYNNQYVPRYREQNRYRDDGRHDGRRDDHRGYNRDDHQRGGDDRGQRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17004; Mature: 17004

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFLLAVLLAAASAPTRAADVGVSVSVGQPGFYGRLDIGDYPQPQLLYQQPRMIERVPE
CHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHCCHHHHHCCC
GRPPVYMRVPPGHARNWRRHCSAYNACDERVYFVRDGWYNNQYVPRYREQNRYRDDGRHD
CCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCCCC
GRRDDHRGYNRDDHQRGGDDRGQRR
CCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKLFLLAVLLAAASAPTRAADVGVSVSVGQPGFYGRLDIGDYPQPQLLYQQPRMIERVPE
CHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCEEECCCCCCCCCHHHHHCCHHHHHCCC
GRPPVYMRVPPGHARNWRRHCSAYNACDERVYFVRDGWYNNQYVPRYREQNRYRDDGRHD
CCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHCCCCCCCCCC
GRRDDHRGYNRDDHQRGGDDRGQRR
CCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA