| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907707
Identifier: 71907707
GI number: 71907707
Start: 2239779
End: 2240012
Strand: Reverse
Name: 71907707
Synonym: Daro_2080
Alternate gene names: NA
Gene position: 2240012-2239779 (Counterclockwise)
Preceding gene: 71907708
Following gene: 71907706
Centisome position: 49.77
GC content: 53.85
Gene sequence:
>234_bases ATGCGAACTGATTGCCGCGTCGCCGGTGCCTTGACGGCTTTTGTCTGGGCTAAAAAGGAAGGGTTCATCATGTTGCGCTA CGCCATTGTGTTTTTCATCATCGCGCTGATCGCAGCGCTATTCGGCTTTACCGGTATCGCAGCGGGGGCTGTCGAAATCG CCAAGATCATGTTTTTCATCTTCGTGCTTTTGGCCCTGGTCTCCCTCGTCATGGGTTTTACGCGGCGCAAGTGA
Upstream 100 bases:
>100_bases GCGGGGATCGAGAGCGATGATGCAAAATCTATATTCGTCTCGCTTCTGCGGCCTCTATCTGTGTCCTGGCGTACAGACCA GAAACCGACGTCAGGTCACG
Downstream 100 bases:
>100_bases ATCTCTTGAACGTCACGAATGAAATGCGATTGGCGGTGCTTTGCGTCAATGTGGCCGACGGAACGAAGCGGGTGCAGAGT CTCGGCGACCCGGAAGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MRTDCRVAGALTAFVWAKKEGFIMLRYAIVFFIIALIAALFGFTGIAAGAVEIAKIMFFIFVLLALVSLVMGFTRRK
Sequences:
>Translated_77_residues MRTDCRVAGALTAFVWAKKEGFIMLRYAIVFFIIALIAALFGFTGIAAGAVEIAKIMFFIFVLLALVSLVMGFTRRK >Mature_77_residues MRTDCRVAGALTAFVWAKKEGFIMLRYAIVFFIIALIAALFGFTGIAAGAVEIAKIMFFIFVLLALVSLVMGFTRRK
Specific function: Unknown
COG id: COG5487
COG function: function code S; Small integral membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0391 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009760 [H]
Pfam domain/function: PF07043 DUF1328 [H]
EC number: NA
Molecular weight: Translated: 8510; Mature: 8510
Theoretical pI: Translated: 11.19; Mature: 11.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTDCRVAGALTAFVWAKKEGFIMLRYAIVFFIIALIAALFGFTGIAAGAVEIAKIMFFI CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVLLALVSLVMGFTRRK HHHHHHHHHHHHHHCCC >Mature Secondary Structure MRTDCRVAGALTAFVWAKKEGFIMLRYAIVFFIIALIAALFGFTGIAAGAVEIAKIMFFI CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVLLALVSLVMGFTRRK HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA