Click here to switch to the map view.

The map label for this gene is osmY [H]

Identifier: 71907675

GI number: 71907675

Start: 2208064

End: 2208378

Strand: Reverse

Name: osmY [H]

Synonym: Daro_2047

Alternate gene names: 71907675

Gene position: 2208378-2208064 (Counterclockwise)

Preceding gene: 71907676

Following gene: 71907674

Centisome position: 49.06

GC content: 54.92

Gene sequence:

>315_bases
ATGAATCAATTCAGCAAATATCTGTCCGCCCTGTTTCTGTCACTGACGCTGCTCACCGCCGTTGGTTGCGCATCCACTTC
CAAGTCGGAAAGCACTGGCGAATACGTCGACGACGCAATGATCACCAGCAAGGTCAAGGCCGCCATCCTTGGCGAATCCA
CCCTGAAATCAGCCGAAATCAATGTCGAAACCTACAAGGGTGTCGTGCAGTTGAGCGGTTTCGTCAGTTCGCAGGCCGCT
GCCAGCAAGGCCGTCGAGGTCGCCCGTACGGTCAAGGGTGTCAGCTCGGTCAAGAACGACATGCGTATCAAGTAA

Upstream 100 bases:

>100_bases
CGTCATCGCTGACTAGTCTCTGTCATTGAGGCGTCGAAGTTCCAACGGGAAGCGGTGCCGGAATCAGGAAGTCCCGTGTT
TCCCCCAATTGGAGAGTCCC

Downstream 100 bases:

>100_bases
TTGACGATCAGCCCGCGGGCCGGTGCAGGAATTTGGTCTGGCACCGGACCGGCGGATTGAAGTAGTCAATCTCACGGTGC
GCCATGCATCGTGAGATTTT

Product: transport-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MNQFSKYLSALFLSLTLLTAVGCASTSKSESTGEYVDDAMITSKVKAAILGESTLKSAEINVETYKGVVQLSGFVSSQAA
ASKAVEVARTVKGVSSVKNDMRIK

Sequences:

>Translated_104_residues
MNQFSKYLSALFLSLTLLTAVGCASTSKSESTGEYVDDAMITSKVKAAILGESTLKSAEINVETYKGVVQLSGFVSSQAA
ASKAVEVARTVKGVSSVKNDMRIK
>Mature_104_residues
MNQFSKYLSALFLSLTLLTAVGCASTSKSESTGEYVDDAMITSKVKAAILGESTLKSAEINVETYKGVVQLSGFVSSQAA
ASKAVEVARTVKGVSSVKNDMRIK

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains [H]

Homologues:

Organism=Escherichia coli, GI1790836, Length=72, Percent_Identity=48.6111111111111, Blast_Score=71, Evalue=1e-14,

Paralogues:

None

Copy number: 2960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 780 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 160 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 80 Molecules/Cell In: Stati

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007055
- InterPro:   IPR014004 [H]

Pfam domain/function: PF04972 BON [H]

EC number: NA

Molecular weight: Translated: 10945; Mature: 10945

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQFSKYLSALFLSLTLLTAVGCASTSKSESTGEYVDDAMITSKVKAAILGESTLKSAEI
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NVETYKGVVQLSGFVSSQAAASKAVEVARTVKGVSSVKNDMRIK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNQFSKYLSALFLSLTLLTAVGCASTSKSESTGEYVDDAMITSKVKAAILGESTLKSAEI
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NVETYKGVVQLSGFVSSQAAASKAVEVARTVKGVSSVKNDMRIK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]