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The map label for this gene is rsmI [H]

Identifier: 71907638

GI number: 71907638

Start: 2166040

End: 2166747

Strand: Reverse

Name: rsmI [H]

Synonym: Daro_2010

Alternate gene names: 71907638

Gene position: 2166747-2166040 (Counterclockwise)

Preceding gene: 71907639

Following gene: 71907634

Centisome position: 48.14

GC content: 57.77

Gene sequence:

>708_bases
ATGGCCGGCACCCTCTATTTGATACCCGTCCCGCTTGGCCCAACCCCCCCCCAAGACTCACTACCCCAGAATGTCTTGGC
AACCATTTGGCCGCTTAGCCACTTTGTTGTTGAGCAAGCCAAGACTGCCCGGGCTTTTCTGAAGGCGGCAGGCACCGAGA
AGCCCCTGCAAGAGCTGCAGCTTGAGGAGCTAAATGAGCACACCCGAGCCGATGCCCTGGATCGACTACTAGCACCTCTG
CACGCGGGTCACGATGTCGGCCTGCTCTCCGAAGCCGGCTGCCCGGCAGTCGCCGACCCCGGCGCCAATCTGGTTGCTTT
AGCGCAGCAGAATAATATTCGTATCGTGCCGCTGATTGGCCCTTCATCGCTATTGCTGGCACTGATGGCATCAGGCCTGA
ACGGCCAACGTTTTGCCTTTCAAGGCTACCTGCCAGCCAAGGATGGCGATCGCTTGAAAGCACTGCGCGACCTGGAGAGC
GAGTCACGGAAGCGTGTTCAAACGCAAATATTCATTGAAACGCCCTACCGGAATCGCGCCATGTTTGACGCAATTTTGCA
GGCGTGTCAGCCGGCCACACGCCTAACCGTGGCCACCGACCTATCTCTACCCGGAGAATCGGTGCTAACACGCACGATTC
AGCAATGGAAAAAACAAACGCCGCCCGAAATCGAGCGGCGTCCGACAGTTTTTCTATTGCTGGCGTAG

Upstream 100 bases:

>100_bases
TGATGAGCAGCATGCGTGGCGACGACCCCAATGCATTGGTTGGCCTACCGCTGATTGCGCTGTGTGATATGTTGCGCAAA
CAGAGCCTGGGGGTATTGTG

Downstream 100 bases:

>100_bases
GTCTCAGTACAAACGCACGCCAAGAGCGCTTTCCGAGAAACCCTTCCAAAAACCAGCGAAGGTGCTTGCCCCAAGGCGCT
TGGCAAAGCGTTCGGCAATA

Product: uroporphyrin-III C/tetrapyrrole methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MAGTLYLIPVPLGPTPPQDSLPQNVLATIWPLSHFVVEQAKTARAFLKAAGTEKPLQELQLEELNEHTRADALDRLLAPL
HAGHDVGLLSEAGCPAVADPGANLVALAQQNNIRIVPLIGPSSLLLALMASGLNGQRFAFQGYLPAKDGDRLKALRDLES
ESRKRVQTQIFIETPYRNRAMFDAILQACQPATRLTVATDLSLPGESVLTRTIQQWKKQTPPEIERRPTVFLLLA

Sequences:

>Translated_235_residues
MAGTLYLIPVPLGPTPPQDSLPQNVLATIWPLSHFVVEQAKTARAFLKAAGTEKPLQELQLEELNEHTRADALDRLLAPL
HAGHDVGLLSEAGCPAVADPGANLVALAQQNNIRIVPLIGPSSLLLALMASGLNGQRFAFQGYLPAKDGDRLKALRDLES
ESRKRVQTQIFIETPYRNRAMFDAILQACQPATRLTVATDLSLPGESVLTRTIQQWKKQTPPEIERRPTVFLLLA
>Mature_234_residues
AGTLYLIPVPLGPTPPQDSLPQNVLATIWPLSHFVVEQAKTARAFLKAAGTEKPLQELQLEELNEHTRADALDRLLAPLH
AGHDVGLLSEAGCPAVADPGANLVALAQQNNIRIVPLIGPSSLLLALMASGLNGQRFAFQGYLPAKDGDRLKALRDLESE
SRKRVQTQIFIETPYRNRAMFDAILQACQPATRLTVATDLSLPGESVLTRTIQQWKKQTPPEIERRPTVFLLLA

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=206, Percent_Identity=31.5533980582524, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 25675; Mature: 25544

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGTLYLIPVPLGPTPPQDSLPQNVLATIWPLSHFVVEQAKTARAFLKAAGTEKPLQELQ
CCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LEELNEHTRADALDRLLAPLHAGHDVGLLSEAGCPAVADPGANLVALAQQNNIRIVPLIG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEC
PSSLLLALMASGLNGQRFAFQGYLPAKDGDRLKALRDLESESRKRVQTQIFIETPYRNRA
HHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCHH
MFDAILQACQPATRLTVATDLSLPGESVLTRTIQQWKKQTPPEIERRPTVFLLLA
HHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC
>Mature Secondary Structure 
AGTLYLIPVPLGPTPPQDSLPQNVLATIWPLSHFVVEQAKTARAFLKAAGTEKPLQELQ
CCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LEELNEHTRADALDRLLAPLHAGHDVGLLSEAGCPAVADPGANLVALAQQNNIRIVPLIG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEC
PSSLLLALMASGLNGQRFAFQGYLPAKDGDRLKALRDLESESRKRVQTQIFIETPYRNRA
HHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCHH
MFDAILQACQPATRLTVATDLSLPGESVLTRTIQQWKKQTPPEIERRPTVFLLLA
HHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]