| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907546
Identifier: 71907546
GI number: 71907546
Start: 2059158
End: 2059820
Strand: Reverse
Name: 71907546
Synonym: Daro_1917
Alternate gene names: NA
Gene position: 2059820-2059158 (Counterclockwise)
Preceding gene: 71907547
Following gene: 71907545
Centisome position: 45.76
GC content: 46.91
Gene sequence:
>663_bases ATGAACATTCCTAATTACATTGGAAAGAGCCCAAACGAGATTCTGGCAACGGAGTTCTTCGACTCTGCTAGCTATTTATA TCGGGGCATGGCTTGGCTCGATTATCACAAAAGAACAAAACAATTTTCCGCACTCATCTATGCCTGTGCTGAAGGTCGGC ATGGGATCGAGTATTTGTTATTTGAAGAGCTAGTAATTAGCACTGGGGCCAATTTATCGGTCGAGGACTATCAGAAGTGC GTTAATGAAAGAAACCGATTCAAAAAAACCATCGCACAACTCAGCCCCGACTATGAACGACTACAGGAGTTCACACAGAT ACTTGCATCTTTGGAAGCATCATTTCCAAAGCTGATTTACTGGGATCATTCTGCGCTCATGAAGGCGTGGGGCTCCCTAT CGCATTATCTCCATTGGTTTGGCGCCCGGAACCTCACGTCAGAGAGCGCCACTTGGGTAGCGTCTGCACAGGCTGAAATA TCGAAGGTGCTTGAACCGATCTGGCTAAAGATCACGTCAGGACAAAGCGGGTTAATGCATCCGAAAGACATGAACCCTGT TGTGCGAGACATATGGGAGCGCTTTCGGTTAGGGGAAATTGATGCTCCAACCGCAAAGTTTCAACTCGACTACCTTAAGC CCCTAGCGCTCCAAAATGCATAA
Upstream 100 bases:
>100_bases GGATGTCCAGTAATGGAAACATGTGTCCATATTTGGCTATAGATATCCAAATATGGATTTTTTCAGTGACGTCTACTTCA CGTTATGCAACTGGCTCTAA
Downstream 100 bases:
>100_bases CATTTCGGTCAAGCGGGACCGTCTTCCGGCGTGCCGCCTCCAGACGGCACCTTACCTTCAACTCTAGCCCACACCAATTT TTCAGCGGAGGAAATTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MNIPNYIGKSPNEILATEFFDSASYLYRGMAWLDYHKRTKQFSALIYACAEGRHGIEYLLFEELVISTGANLSVEDYQKC VNERNRFKKTIAQLSPDYERLQEFTQILASLEASFPKLIYWDHSALMKAWGSLSHYLHWFGARNLTSESATWVASAQAEI SKVLEPIWLKITSGQSGLMHPKDMNPVVRDIWERFRLGEIDAPTAKFQLDYLKPLALQNA
Sequences:
>Translated_220_residues MNIPNYIGKSPNEILATEFFDSASYLYRGMAWLDYHKRTKQFSALIYACAEGRHGIEYLLFEELVISTGANLSVEDYQKC VNERNRFKKTIAQLSPDYERLQEFTQILASLEASFPKLIYWDHSALMKAWGSLSHYLHWFGARNLTSESATWVASAQAEI SKVLEPIWLKITSGQSGLMHPKDMNPVVRDIWERFRLGEIDAPTAKFQLDYLKPLALQNA >Mature_220_residues MNIPNYIGKSPNEILATEFFDSASYLYRGMAWLDYHKRTKQFSALIYACAEGRHGIEYLLFEELVISTGANLSVEDYQKC VNERNRFKKTIAQLSPDYERLQEFTQILASLEASFPKLIYWDHSALMKAWGSLSHYLHWFGARNLTSESATWVASAQAEI SKVLEPIWLKITSGQSGLMHPKDMNPVVRDIWERFRLGEIDAPTAKFQLDYLKPLALQNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25305; Mature: 25305
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIPNYIGKSPNEILATEFFDSASYLYRGMAWLDYHKRTKQFSALIYACAEGRHGIEYLL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH FEELVISTGANLSVEDYQKCVNERNRFKKTIAQLSPDYERLQEFTQILASLEASFPKLIY HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEE WDHSALMKAWGSLSHYLHWFGARNLTSESATWVASAQAEISKVLEPIWLKITSGQSGLMH ECHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC PKDMNPVVRDIWERFRLGEIDAPTAKFQLDYLKPLALQNA CCCCCHHHHHHHHHHCCCCCCCCHHHEEHHHHHHHHHCCC >Mature Secondary Structure MNIPNYIGKSPNEILATEFFDSASYLYRGMAWLDYHKRTKQFSALIYACAEGRHGIEYLL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH FEELVISTGANLSVEDYQKCVNERNRFKKTIAQLSPDYERLQEFTQILASLEASFPKLIY HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEE WDHSALMKAWGSLSHYLHWFGARNLTSESATWVASAQAEISKVLEPIWLKITSGQSGLMH ECHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC PKDMNPVVRDIWERFRLGEIDAPTAKFQLDYLKPLALQNA CCCCCHHHHHHHHHHCCCCCCCCHHHEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA