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The map label for this gene is pal [C]

Identifier: 71907527

GI number: 71907527

Start: 2041357

End: 2041953

Strand: Reverse

Name: pal [C]

Synonym: Daro_1898

Alternate gene names: 71907527

Gene position: 2041953-2041357 (Counterclockwise)

Preceding gene: 71907528

Following gene: 71907526

Centisome position: 45.37

GC content: 62.65

Gene sequence:

>597_bases
ATGGGACAACAATACGCCGCCCGGCTCGTCTCCCTGCCGCTGGTATTGGCTGCCTGCGGCGGGCAGTCCATCGTCCTGGT
GGCCGACCCCGGCGGCCATGTGGGTCAGGCCGAGGTTGTAACGGCGGCCGGCAAGCAACGCCTGGAAAAATCAGGTGACA
TGACGCAAACCAGCGGCGAGGCCAAACCGCCATCTGCCGTCAAGACAGCCGATCCCGCCTACATCGCCAGCACGTTCGCC
GAGGTGCTGGCCATCGAACCGCCTCCACCGCAAGTCTTTACGCTGATGTTCGAAAGCGGGACCACCAATCTGACCACCGC
TTCGCTCGATCAGATTCCGAACATCGTTGCAGCCAGCCAGAAACGCCCGGCTGTCAGTGTTCGCATCAGCGGCCATACCG
ATGCGACCGGCTCGGACAAGGTCAACGACGCGCTGTCCCTGGAGCGCGCCATGCAAGTCTGGAACCTGCTACAACAAAAG
GGCATACCGGCCAGGCTGATGTCGGTTACGTCTCACGGCAAGGGCAATCCAGCCATTCCAACGCCCGACGGCGTGGCCGA
ACCACGCAATCGGCGAGTTGTGGTGATCGTGCACTAG

Upstream 100 bases:

>100_bases
AGATCGTCAAACTATCCCCGGATTCGGCACGCATACAAACGCCAGATGCCACCATCGCCGTGCGGGGCACCAAACTACTT
GTCGAGATCAAGGACTAGCC

Downstream 100 bases:

>100_bases
GTCGATACGGCCCCCGGTTATGGTGGACATTGCCAACCGTCTGAAAACCATCGCCTCCTCCGATGGATGGCTGGGTGGAA
AACTCGCCATTCTGCTCACC

Product: OmpA/MotB

Products: NA

Alternate protein names: OmpA/MotB; Outer Membrane Protein; OmpA/MotB Domain-Containing Protein; OmpA Family Protein; OmpA Protein; Ompa/Motb Domain Protein; Type I Secretion Outer Membrane Protein lC

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MGQQYAARLVSLPLVLAACGGQSIVLVADPGGHVGQAEVVTAAGKQRLEKSGDMTQTSGEAKPPSAVKTADPAYIASTFA
EVLAIEPPPPQVFTLMFESGTTNLTTASLDQIPNIVAASQKRPAVSVRISGHTDATGSDKVNDALSLERAMQVWNLLQQK
GIPARLMSVTSHGKGNPAIPTPDGVAEPRNRRVVVIVH

Sequences:

>Translated_198_residues
MGQQYAARLVSLPLVLAACGGQSIVLVADPGGHVGQAEVVTAAGKQRLEKSGDMTQTSGEAKPPSAVKTADPAYIASTFA
EVLAIEPPPPQVFTLMFESGTTNLTTASLDQIPNIVAASQKRPAVSVRISGHTDATGSDKVNDALSLERAMQVWNLLQQK
GIPARLMSVTSHGKGNPAIPTPDGVAEPRNRRVVVIVH
>Mature_197_residues
GQQYAARLVSLPLVLAACGGQSIVLVADPGGHVGQAEVVTAAGKQRLEKSGDMTQTSGEAKPPSAVKTADPAYIASTFAE
VLAIEPPPPQVFTLMFESGTTNLTTASLDQIPNIVAASQKRPAVSVRISGHTDATGSDKVNDALSLERAMQVWNLLQQKG
IPARLMSVTSHGKGNPAIPTPDGVAEPRNRRVVVIVH

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20650; Mature: 20519

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQQYAARLVSLPLVLAACGGQSIVLVADPGGHVGQAEVVTAAGKQRLEKSGDMTQTSGE
CCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
AKPPSAVKTADPAYIASTFAEVLAIEPPPPQVFTLMFESGTTNLTTASLDQIPNIVAASQ
CCCCCCCCCCCHHHHHHHHHHHEECCCCCCCEEEEEEECCCCCCEEHHHHHCCHHHHCCC
KRPAVSVRISGHTDATGSDKVNDALSLERAMQVWNLLQQKGIPARLMSVTSHGKGNPAIP
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCC
TPDGVAEPRNRRVVVIVH
CCCCCCCCCCCEEEEEEC
>Mature Secondary Structure 
GQQYAARLVSLPLVLAACGGQSIVLVADPGGHVGQAEVVTAAGKQRLEKSGDMTQTSGE
CHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
AKPPSAVKTADPAYIASTFAEVLAIEPPPPQVFTLMFESGTTNLTTASLDQIPNIVAASQ
CCCCCCCCCCCHHHHHHHHHHHEECCCCCCCEEEEEEECCCCCCEEHHHHHCCHHHHCCC
KRPAVSVRISGHTDATGSDKVNDALSLERAMQVWNLLQQKGIPARLMSVTSHGKGNPAIP
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCC
TPDGVAEPRNRRVVVIVH
CCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA