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The map label for this gene is rpfG [H]

Identifier: 71907526

GI number: 71907526

Start: 2039322

End: 2041337

Strand: Reverse

Name: rpfG [H]

Synonym: Daro_1897

Alternate gene names: 71907526

Gene position: 2041337-2039322 (Counterclockwise)

Preceding gene: 71907527

Following gene: 71907525

Centisome position: 45.35

GC content: 61.06

Gene sequence:

>2016_bases
ATGGTGGACATTGCCAACCGTCTGAAAACCATCGCCTCCTCCGATGGATGGCTGGGTGGAAAACTCGCCATTCTGCTCAC
CGGCTTTGCGCTGACAGCGATGATCACCATCATCTCGCTGCTCCAGCCGAGCCTCCTGCAAAAAGCTGATCTGTTCGTCT
ACGACCAGCTGCTGACCAGCCGGGCCGTTCCAGCACCATCGGCTGATCCTGTCCTGGTCGCCATCGACGAAGCCAGCCTG
GCCGCCTTCGGCCAATGGCCCTGGCCGCGCTACCGGCTGGCCATGCTGATCGAACACCTGCAAGCCCAGGGGGCCAAAGT
GGTGGCGCTGGATTTCCTGATGCCGGAACCGGATCGAACCTCGCCCGAAGTCATCCGCCAGGAGCGGCGACGAGATCGGA
TTGATAACCCCGTCTTGTCGGCCGCCAACGGCGCCGACAGTAATTCGCAACGCCTCGCCGAAGCCCTGGCCAACGGGCCG
ACCATCCTCGGTTATTTCCTCAAATTCGAAAACACGGCCACAAGCACGACTGGCCGTGCGCCACCCAAAGTTCCGGATGG
CATGGTGACCACCCGCTTGGCTGGCTATCGTGTCCAGCAGGCAACGCCGAGCGGCCAGCTGCGTAGCCTGCCGGCACTCA
CCGGTGCGGCAAGCGCCGAGGGATTCACCAATGCCCAGGAAGACATCGACGGCACGCTGCGCCGGGTTCCGCTGCTGCTG
ACGGTGGATGGCAAGGAATATCCATCTCTCGCCCTGGCCACGCTGCTCGCTGCCTCGTCGGAACGCCATATCCAAATCGC
TGATGAAGCCGGTGAAAACATCCTGCGCTGGGATCATCGGAGAATTCCGCTGGATGCCAGCGGCAACCTGCTGATCGATT
TTCGCCGGTCACCGCCACTAACGATCTCCGCCCTGGAAATTCTGCAGGGCAAGTTACCCCCCGACAGCCTGCGCAACCGA
ATCGTGCTCCTCGGGGCCCTGGCCACCGGGCTCGGTGACCTGCATCGCACACCGCTCGGCAAGCCAATCAGCGGCCTGGC
TGTGCATGCCACGATCATCGACAACATTCTGGCCAACAGCTTTGTGCTGCGACCCGGCTGGGCGCGCGGGGCAGAATTGG
CGCTGGTGCTACTTACCGGCCTGCTCGCCACCATCCTCCTGAGCAGCGCCGGATTTCTGGTTTCGTCACTACTCGTTACC
GCCGGCACACTCGGCTGCTACGTGGCCAGTCGAACGCTGATGGTCAGCCAGGGCATCCACCTCTCCCCGCTGCTGCCCAT
GCTGACCCTGCTGCTGGTCGGCAGTGTGCTCAGCCTGCTGAAATACGGCATCGAGGCGCGCAAATTGCGCCTGCGCACGC
AGGATCTGCTGAATGCCCAGGACGAGATCATTGTCAGCATGTCCGTGCTGGCCGAAGCCCGCGACAAGGAAACCGGCGGC
CATATCCGCCGCACTCAGCGCTACGTGGAAATTCTGGCCAGCCAGTTGGCCACCACGCCCCGCTATGCCCACCTGACGCG
ATTCGACATCGAATTGCTCGGCAAATCAGCGCCCCTTCACGACATCGGCAAAATCGGCATTCCCGATGCCATCCTGCAAA
AACCCGGCAAGCTGACCGAAGCCGAATATACGACCATGCAGTCCCACACGCTGATCGGCTCGGAAGCCCTGACCCAGATC
GTCAGTGCCAGCGGCCATCCGGAAAAACAATATTTCCTCAACTATGCTCGCCAAATGACCGAAAGCCATCACGAACACTG
GAACGGCGGCGGCTACCCCCATCACCTGCGCGGTGAAGAAATCCCCCTCCCCGGTCGCCTGATGGCGCTGGCCGATGTTT
ATGATGCCTTGATCAGTCAGCGCGTTTACAAAAAACCCTACACCCACGCCGAGGTCTGCCGGTTCATCACCGAAAAATCC
GGCACTCAGTTTGATCCGGAAATCGTGGCGGCGTTTATGGCCAGAAACGAGGAGTTTTTGAAGGTTGCCGAAGTGTTTGC
TGATCCGCTTGAGTAA

Upstream 100 bases:

>100_bases
GGCAAGGGCAATCCAGCCATTCCAACGCCCGACGGCGTGGCCGAACCACGCAATCGGCGAGTTGTGGTGATCGTGCACTA
GGTCGATACGGCCCCCGGTT

Downstream 100 bases:

>100_bases
CGGATATATTGCGAGCACGAGTCCAGATGCTCCAAGGAAGAAGCCCAACCGAAACCCTCGTGTTTCGCTTGAATTTCTGG
CGTTCCGACCTGACCGCCAG

Product: metal-dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 671; Mature: 671

Protein sequence:

>671_residues
MVDIANRLKTIASSDGWLGGKLAILLTGFALTAMITIISLLQPSLLQKADLFVYDQLLTSRAVPAPSADPVLVAIDEASL
AAFGQWPWPRYRLAMLIEHLQAQGAKVVALDFLMPEPDRTSPEVIRQERRRDRIDNPVLSAANGADSNSQRLAEALANGP
TILGYFLKFENTATSTTGRAPPKVPDGMVTTRLAGYRVQQATPSGQLRSLPALTGAASAEGFTNAQEDIDGTLRRVPLLL
TVDGKEYPSLALATLLAASSERHIQIADEAGENILRWDHRRIPLDASGNLLIDFRRSPPLTISALEILQGKLPPDSLRNR
IVLLGALATGLGDLHRTPLGKPISGLAVHATIIDNILANSFVLRPGWARGAELALVLLTGLLATILLSSAGFLVSSLLVT
AGTLGCYVASRTLMVSQGIHLSPLLPMLTLLLVGSVLSLLKYGIEARKLRLRTQDLLNAQDEIIVSMSVLAEARDKETGG
HIRRTQRYVEILASQLATTPRYAHLTRFDIELLGKSAPLHDIGKIGIPDAILQKPGKLTEAEYTTMQSHTLIGSEALTQI
VSASGHPEKQYFLNYARQMTESHHEHWNGGGYPHHLRGEEIPLPGRLMALADVYDALISQRVYKKPYTHAEVCRFITEKS
GTQFDPEIVAAFMARNEEFLKVAEVFADPLE

Sequences:

>Translated_671_residues
MVDIANRLKTIASSDGWLGGKLAILLTGFALTAMITIISLLQPSLLQKADLFVYDQLLTSRAVPAPSADPVLVAIDEASL
AAFGQWPWPRYRLAMLIEHLQAQGAKVVALDFLMPEPDRTSPEVIRQERRRDRIDNPVLSAANGADSNSQRLAEALANGP
TILGYFLKFENTATSTTGRAPPKVPDGMVTTRLAGYRVQQATPSGQLRSLPALTGAASAEGFTNAQEDIDGTLRRVPLLL
TVDGKEYPSLALATLLAASSERHIQIADEAGENILRWDHRRIPLDASGNLLIDFRRSPPLTISALEILQGKLPPDSLRNR
IVLLGALATGLGDLHRTPLGKPISGLAVHATIIDNILANSFVLRPGWARGAELALVLLTGLLATILLSSAGFLVSSLLVT
AGTLGCYVASRTLMVSQGIHLSPLLPMLTLLLVGSVLSLLKYGIEARKLRLRTQDLLNAQDEIIVSMSVLAEARDKETGG
HIRRTQRYVEILASQLATTPRYAHLTRFDIELLGKSAPLHDIGKIGIPDAILQKPGKLTEAEYTTMQSHTLIGSEALTQI
VSASGHPEKQYFLNYARQMTESHHEHWNGGGYPHHLRGEEIPLPGRLMALADVYDALISQRVYKKPYTHAEVCRFITEKS
GTQFDPEIVAAFMARNEEFLKVAEVFADPLE
>Mature_671_residues
MVDIANRLKTIASSDGWLGGKLAILLTGFALTAMITIISLLQPSLLQKADLFVYDQLLTSRAVPAPSADPVLVAIDEASL
AAFGQWPWPRYRLAMLIEHLQAQGAKVVALDFLMPEPDRTSPEVIRQERRRDRIDNPVLSAANGADSNSQRLAEALANGP
TILGYFLKFENTATSTTGRAPPKVPDGMVTTRLAGYRVQQATPSGQLRSLPALTGAASAEGFTNAQEDIDGTLRRVPLLL
TVDGKEYPSLALATLLAASSERHIQIADEAGENILRWDHRRIPLDASGNLLIDFRRSPPLTISALEILQGKLPPDSLRNR
IVLLGALATGLGDLHRTPLGKPISGLAVHATIIDNILANSFVLRPGWARGAELALVLLTGLLATILLSSAGFLVSSLLVT
AGTLGCYVASRTLMVSQGIHLSPLLPMLTLLLVGSVLSLLKYGIEARKLRLRTQDLLNAQDEIIVSMSVLAEARDKETGG
HIRRTQRYVEILASQLATTPRYAHLTRFDIELLGKSAPLHDIGKIGIPDAILQKPGKLTEAEYTTMQSHTLIGSEALTQI
VSASGHPEKQYFLNYARQMTESHHEHWNGGGYPHHLRGEEIPLPGRLMALADVYDALISQRVYKKPYTHAEVCRFITEKS
GTQFDPEIVAAFMARNEEFLKVAEVFADPLE

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG3437

COG function: function code KT; Response regulator containing a CheY-like receiver domain and an HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 73031; Mature: 73031

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDIANRLKTIASSDGWLGGKLAILLTGFALTAMITIISLLQPSLLQKADLFVYDQLLTS
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
RAVPAPSADPVLVAIDEASLAAFGQWPWPRYRLAMLIEHLQAQGAKVVALDFLMPEPDRT
CCCCCCCCCCEEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCC
SPEVIRQERRRDRIDNPVLSAANGADSNSQRLAEALANGPTILGYFLKFENTATSTTGRA
CHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCC
PPKVPDGMVTTRLAGYRVQQATPSGQLRSLPALTGAASAEGFTNAQEDIDGTLRRVPLLL
CCCCCCCHHHHHHHCEEEECCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEE
TVDGKEYPSLALATLLAASSERHIQIADEAGENILRWDHRRIPLDASGNLLIDFRRSPPL
EECCCCCCHHHHHHHHHCCCCCEEEEHHHCCCHHHHCCCCCCCCCCCCCEEEEECCCCCC
TISALEILQGKLPPDSLRNRIVLLGALATGLGDLHRTPLGKPISGLAVHATIIDNILANS
CHHHHHHHHCCCCHHHHHCCEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC
FVLRPGWARGAELALVLLTGLLATILLSSAGFLVSSLLVTAGTLGCYVASRTLMVSQGIH
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LSPLLPMLTLLLVGSVLSLLKYGIEARKLRLRTQDLLNAQDEIIVSMSVLAEARDKETGG
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
HIRRTQRYVEILASQLATTPRYAHLTRFDIELLGKSAPLHDIGKIGIPDAILQKPGKLTE
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHCCCCCCCC
AEYTTMQSHTLIGSEALTQIVSASGHPEKQYFLNYARQMTESHHEHWNGGGYPHHLRGEE
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
IPLPGRLMALADVYDALISQRVYKKPYTHAEVCRFITEKSGTQFDPEIVAAFMARNEEFL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHH
KVAEVFADPLE
HHHHHHCCCCC
>Mature Secondary Structure
MVDIANRLKTIASSDGWLGGKLAILLTGFALTAMITIISLLQPSLLQKADLFVYDQLLTS
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
RAVPAPSADPVLVAIDEASLAAFGQWPWPRYRLAMLIEHLQAQGAKVVALDFLMPEPDRT
CCCCCCCCCCEEEEECCCCHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCC
SPEVIRQERRRDRIDNPVLSAANGADSNSQRLAEALANGPTILGYFLKFENTATSTTGRA
CHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCC
PPKVPDGMVTTRLAGYRVQQATPSGQLRSLPALTGAASAEGFTNAQEDIDGTLRRVPLLL
CCCCCCCHHHHHHHCEEEECCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEE
TVDGKEYPSLALATLLAASSERHIQIADEAGENILRWDHRRIPLDASGNLLIDFRRSPPL
EECCCCCCHHHHHHHHHCCCCCEEEEHHHCCCHHHHCCCCCCCCCCCCCEEEEECCCCCC
TISALEILQGKLPPDSLRNRIVLLGALATGLGDLHRTPLGKPISGLAVHATIIDNILANS
CHHHHHHHHCCCCHHHHHCCEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC
FVLRPGWARGAELALVLLTGLLATILLSSAGFLVSSLLVTAGTLGCYVASRTLMVSQGIH
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LSPLLPMLTLLLVGSVLSLLKYGIEARKLRLRTQDLLNAQDEIIVSMSVLAEARDKETGG
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
HIRRTQRYVEILASQLATTPRYAHLTRFDIELLGKSAPLHDIGKIGIPDAILQKPGKLTE
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHHCCCCCCCC
AEYTTMQSHTLIGSEALTQIVSASGHPEKQYFLNYARQMTESHHEHWNGGGYPHHLRGEE
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
IPLPGRLMALADVYDALISQRVYKKPYTHAEVCRFITEKSGTQFDPEIVAAFMARNEEFL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHH
KVAEVFADPLE
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]