Click here to switch to the map view.

The map label for this gene is blc [H]

Identifier: 71907511

GI number: 71907511

Start: 2023264

End: 2023803

Strand: Reverse

Name: blc [H]

Synonym: Daro_1882

Alternate gene names: 71907511

Gene position: 2023803-2023264 (Counterclockwise)

Preceding gene: 71907514

Following gene: 71907510

Centisome position: 44.96

GC content: 61.48

Gene sequence:

>540_bases
ATGAACATCGCTCGTACGCCCCTCCTTGCCGGACTGCTGGCATTCGCTCTCCTCGCCCCGACTGCCCGGGCCGAGATGCC
CGCCGTGCAAAGCGTCGGCCAGATAGACCTCGCGCGCTATATCGGCAAATGGTATGAAATCGGCGCCTTCCCGATGTTCT
TCCAGCGGCAGTGCATCGGCGACACCACGGCCGAATATTCGCTCAAGGCAGACGGCGAGATCGCCGTCGACAACCGTTGC
CGGACCGAGAGCGGCTTCGATCAGGCCATCGGCCGCGCCTGGGTGCCCGAGACAGCAAAAAACGCGGAATTGAAGGTGTC
GTTTTTCTGGCCGTTCCGTTCCGACTACTGGGTCATCGCCCTGGATGATAGCTACCGCTGGGCTGTCGTCGGCAATCCGA
ACCGCAAGTACCTGTGGCTGCTCTCGCGGACGCCACGGCTGCCTCAAGCCGAAATCGAGCGCGCCTTGAACTCGGCCAAA
GCCCAGGGCTACGACCTGAACCAATTCAAATACACCCGCCACACGGAGACAAAGCAATGA

Upstream 100 bases:

>100_bases
CGATTCTACGGGCTACGTAGAGCCTCCACCAGCACCGGAGTAGCCACCGGCAACAGAACCCCGAGGGGTAGAATCGAAGC
AATCATTCAGGAAGCCATTA

Downstream 100 bases:

>100_bases
AGGGCATTGACCACGGCAAACTCGATAAACTCGTCCTCGATGCCCGCAAGGCGGCCGATGCCAGAGCCGAGGGCTACCGC
GAACGTGCCCTGAAAATCTA

Product: Lipocalin-related protein and Bos/Can/Equ allergen

Products: NA

Alternate protein names: Protein vlp [H]

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MNIARTPLLAGLLAFALLAPTARAEMPAVQSVGQIDLARYIGKWYEIGAFPMFFQRQCIGDTTAEYSLKADGEIAVDNRC
RTESGFDQAIGRAWVPETAKNAELKVSFFWPFRSDYWVIALDDSYRWAVVGNPNRKYLWLLSRTPRLPQAEIERALNSAK
AQGYDLNQFKYTRHTETKQ

Sequences:

>Translated_179_residues
MNIARTPLLAGLLAFALLAPTARAEMPAVQSVGQIDLARYIGKWYEIGAFPMFFQRQCIGDTTAEYSLKADGEIAVDNRC
RTESGFDQAIGRAWVPETAKNAELKVSFFWPFRSDYWVIALDDSYRWAVVGNPNRKYLWLLSRTPRLPQAEIERALNSAK
AQGYDLNQFKYTRHTETKQ
>Mature_179_residues
MNIARTPLLAGLLAFALLAPTARAEMPAVQSVGQIDLARYIGKWYEIGAFPMFFQRQCIGDTTAEYSLKADGEIAVDNRC
RTESGFDQAIGRAWVPETAKNAELKVSFFWPFRSDYWVIALDDSYRWAVVGNPNRKYLWLLSRTPRLPQAEIERALNSAK
AQGYDLNQFKYTRHTETKQ

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Escherichia coli, GI1790592, Length=166, Percent_Identity=39.1566265060241, Blast_Score=105, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 20402; Mature: 20402

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIARTPLLAGLLAFALLAPTARAEMPAVQSVGQIDLARYIGKWYEIGAFPMFFQRQCIG
CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHCC
DTTAEYSLKADGEIAVDNRCRTESGFDQAIGRAWVPETAKNAELKVSFFWPFRSDYWVIA
CCCCCEEECCCCEEEECCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEEEECCCCCEEEEE
LDDSYRWAVVGNPNRKYLWLLSRTPRLPQAEIERALNSAKAQGYDLNQFKYTRHTETKQ
ECCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MNIARTPLLAGLLAFALLAPTARAEMPAVQSVGQIDLARYIGKWYEIGAFPMFFQRQCIG
CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHCC
DTTAEYSLKADGEIAVDNRCRTESGFDQAIGRAWVPETAKNAELKVSFFWPFRSDYWVIA
CCCCCEEECCCCEEEECCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEEEECCCCCEEEEE
LDDSYRWAVVGNPNRKYLWLLSRTPRLPQAEIERALNSAKAQGYDLNQFKYTRHTETKQ
ECCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8514410; 10952301 [H]