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The map label for this gene is 71907484

Identifier: 71907484

GI number: 71907484

Start: 1994787

End: 1996703

Strand: Reverse

Name: 71907484

Synonym: Daro_1855

Alternate gene names: NA

Gene position: 1996703-1994787 (Counterclockwise)

Preceding gene: 71907485

Following gene: 71907479

Centisome position: 44.36

GC content: 61.87

Gene sequence:

>1917_bases
ATGATCTCTGCCGATACCACCCGCCCGCGCATCCTCTCGGTCATCCCGCCGATGACGCAGTTGAATACGCCCTACCCGGC
TACCGCCTACCTGACTGGTTTTCTGCGCTCGCGCGGTTTTCAGTCCGAACAGACCGATCTGGCACTGGCCTTGGTGCTTG
AACTGCTGTCGCCGACAGGTCTACCGAAGATCAAGGCAGCCGCCGAAGCCATTGCCGGCAAGAAGCGCTCGAATACGCTG
AAGATTTTCCTCAACGAGTTCGACCGTTACCTCGCCTCGATCGGCCCGGCCATTGCCTTGCTGCAAGGTCGTGACGGCTC
GATTGCCCACCGCATCTGCAGCCGCGCCTTCCTGCCCGAAGGACCGCGTTTCGCCTCGCTCGACAACTACATCGACGAAG
ATGGCGGCGACCCGCTGGCTTGGGCCTTCGGTTCCCTCGGCGTGCAGGACCGGGCGCGGCATCTGGCCACGCTGTACCTG
AACGATCTCGCCGATGTGCTGCGCGAGGCCGTCGATACCCGCTTCGAATTCGTCCGCTACGCCGAGTCGCTGGCCCAGAG
CCAGGCCAGTTTCAACCCGCTGGCGACGGCATTGGCCGCGCCGAAAACGCTGGTCGATGAAACGCTGGAAAAGCTGACCC
TGCAAGCCATTGAGCGCAGCCAGCCAGAGGTTGTGCTGATTTCCGTGCCCTTTCCTGGCTCGGTCTATGCCGCCTTCCGC
ATTGCGCAGACGATCAAGGCCAAAAACCCGAAGATCGTCACCGTGCTCGGTGGCGGCTACGTCAATACTGAGTTGCGCGA
ACTGGCCGAACCCCGCGTCTTCGACTATTTCGATTACGTCACCCTCGATGATGGCGAGATGCCGCTACTGGCGCTGTTCG
AACATCTGGCCGGCAAGCGCCCGCGCCTCAACCTCGTCCGCACCTTCACCCGCGTCGATGGCGCCGTCCGCTACTTCAAC
ACTGGCGAGGCGGACATCCCCTTCGAGGAAGTCGGCACGCCGACCTGGGATGGCCTGCCGCTCGACCACTACCTGTCGCT
GCTCGACATGCTCAATCCCATGCACCGGCTTTGGTCGGACGGGCACTGGAACAAACTGACTGTTGCCCATGGCTGCTACT
GGAAGAAATGCAGCTTCTGCGACGTCAGCCTCGACTACATCGGCCGTTACGACGCGGCCAGCGCCAAGGTGCTGGTCGAC
CGCATCGAGCAGATCATCGCCGAAACCGGCCATACCGGTTTTCATCTCGTCGACGAAGCCGCCCCCCCCAAGGCGCTGCG
GGCGCTGGCCGAAGAGTTGCAGCTGCGCAACCTGGCGATTTCGTGGTGGGGCAACATCCGCTTCGAAAAGTCCTTCACGC
CGGAACTCTGCCTGCAACTGGCCGATAGCGGATGCATCGCCATCTCCGGCGGACTGGAGGTTGCCTCCGACCGCCTGCTC
GACCTGATGAAAAAAGGCGTCTCGGTCGATCAGGTCGCCCGCGTCACCCGTGCCTTCACCGATGCGGGGGTGCTCGTCCA
TGCCTACCTGATGTACGGCTTTCCGACACAAACGGTTCAGGATACGGTCGATGCGCTCGAATACGTCCGCCAGCTATTTG
CCGAGGGCTGCATCCAGTCCGGTTATTTCCACCGCTTCGCCTGCACGGTGCATTCGCCCGTTGGCATGAATCCGGCCGAA
TACGGCATCAAACTGCAGCCGCTACCGCCCGGGAAGTTCGCCAAGAACGATGTGCAGTTCATCGACCCGACCGGCGTCGA
TCACAACAGCCTGGGCAAGGCGCTGAACAAGGCGCTTTACAACTACATGCACGGCATCGGGCTGGATAGCGACGTGCGCA
GTTGGTTCAGCGAAAAAGTGCCGCGCCCGACCGTGGCTCGTCACAAGATTTCGAAGGCGCTGTCAGGCCAGTTTTAA

Upstream 100 bases:

>100_bases
TAACAGGCCTATGTCCGCAATGGGCACGAAGCTGCCTAGGAAGTGCAACTGACTAGTACGCTCCAAGCGGTTTTTCGTTT
CCACGGGTAAACTAGCGGCA

Downstream 100 bases:

>100_bases
GGCACCGAGCCGCGAAACGATCTCGGCGAACAGCGGGCGAGCCGAGACGTTTTCCTGGGCGCAGTCGGCCAGCAGGGATT
TCAGTTTTTCGACTTTTTCC

Product: radical SAM family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 638; Mature: 638

Protein sequence:

>638_residues
MISADTTRPRILSVIPPMTQLNTPYPATAYLTGFLRSRGFQSEQTDLALALVLELLSPTGLPKIKAAAEAIAGKKRSNTL
KIFLNEFDRYLASIGPAIALLQGRDGSIAHRICSRAFLPEGPRFASLDNYIDEDGGDPLAWAFGSLGVQDRARHLATLYL
NDLADVLREAVDTRFEFVRYAESLAQSQASFNPLATALAAPKTLVDETLEKLTLQAIERSQPEVVLISVPFPGSVYAAFR
IAQTIKAKNPKIVTVLGGGYVNTELRELAEPRVFDYFDYVTLDDGEMPLLALFEHLAGKRPRLNLVRTFTRVDGAVRYFN
TGEADIPFEEVGTPTWDGLPLDHYLSLLDMLNPMHRLWSDGHWNKLTVAHGCYWKKCSFCDVSLDYIGRYDAASAKVLVD
RIEQIIAETGHTGFHLVDEAAPPKALRALAEELQLRNLAISWWGNIRFEKSFTPELCLQLADSGCIAISGGLEVASDRLL
DLMKKGVSVDQVARVTRAFTDAGVLVHAYLMYGFPTQTVQDTVDALEYVRQLFAEGCIQSGYFHRFACTVHSPVGMNPAE
YGIKLQPLPPGKFAKNDVQFIDPTGVDHNSLGKALNKALYNYMHGIGLDSDVRSWFSEKVPRPTVARHKISKALSGQF

Sequences:

>Translated_638_residues
MISADTTRPRILSVIPPMTQLNTPYPATAYLTGFLRSRGFQSEQTDLALALVLELLSPTGLPKIKAAAEAIAGKKRSNTL
KIFLNEFDRYLASIGPAIALLQGRDGSIAHRICSRAFLPEGPRFASLDNYIDEDGGDPLAWAFGSLGVQDRARHLATLYL
NDLADVLREAVDTRFEFVRYAESLAQSQASFNPLATALAAPKTLVDETLEKLTLQAIERSQPEVVLISVPFPGSVYAAFR
IAQTIKAKNPKIVTVLGGGYVNTELRELAEPRVFDYFDYVTLDDGEMPLLALFEHLAGKRPRLNLVRTFTRVDGAVRYFN
TGEADIPFEEVGTPTWDGLPLDHYLSLLDMLNPMHRLWSDGHWNKLTVAHGCYWKKCSFCDVSLDYIGRYDAASAKVLVD
RIEQIIAETGHTGFHLVDEAAPPKALRALAEELQLRNLAISWWGNIRFEKSFTPELCLQLADSGCIAISGGLEVASDRLL
DLMKKGVSVDQVARVTRAFTDAGVLVHAYLMYGFPTQTVQDTVDALEYVRQLFAEGCIQSGYFHRFACTVHSPVGMNPAE
YGIKLQPLPPGKFAKNDVQFIDPTGVDHNSLGKALNKALYNYMHGIGLDSDVRSWFSEKVPRPTVARHKISKALSGQF
>Mature_638_residues
MISADTTRPRILSVIPPMTQLNTPYPATAYLTGFLRSRGFQSEQTDLALALVLELLSPTGLPKIKAAAEAIAGKKRSNTL
KIFLNEFDRYLASIGPAIALLQGRDGSIAHRICSRAFLPEGPRFASLDNYIDEDGGDPLAWAFGSLGVQDRARHLATLYL
NDLADVLREAVDTRFEFVRYAESLAQSQASFNPLATALAAPKTLVDETLEKLTLQAIERSQPEVVLISVPFPGSVYAAFR
IAQTIKAKNPKIVTVLGGGYVNTELRELAEPRVFDYFDYVTLDDGEMPLLALFEHLAGKRPRLNLVRTFTRVDGAVRYFN
TGEADIPFEEVGTPTWDGLPLDHYLSLLDMLNPMHRLWSDGHWNKLTVAHGCYWKKCSFCDVSLDYIGRYDAASAKVLVD
RIEQIIAETGHTGFHLVDEAAPPKALRALAEELQLRNLAISWWGNIRFEKSFTPELCLQLADSGCIAISGGLEVASDRLL
DLMKKGVSVDQVARVTRAFTDAGVLVHAYLMYGFPTQTVQDTVDALEYVRQLFAEGCIQSGYFHRFACTVHSPVGMNPAE
YGIKLQPLPPGKFAKNDVQFIDPTGVDHNSLGKALNKALYNYMHGIGLDSDVRSWFSEKVPRPTVARHKISKALSGQF

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 70587; Mature: 70587

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISADTTRPRILSVIPPMTQLNTPYPATAYLTGFLRSRGFQSEQTDLALALVLELLSPTG
CCCCCCCCCCHHHHCCCHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
LPKIKAAAEAIAGKKRSNTLKIFLNEFDRYLASIGPAIALLQGRDGSIAHRICSRAFLPE
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCC
GPRFASLDNYIDEDGGDPLAWAFGSLGVQDRARHLATLYLNDLADVLREAVDTRFEFVRY
CCCCCCHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AESLAQSQASFNPLATALAAPKTLVDETLEKLTLQAIERSQPEVVLISVPFPGSVYAAFR
HHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH
IAQTIKAKNPKIVTVLGGGYVNTELRELAEPRVFDYFDYVTLDDGEMPLLALFEHLAGKR
HHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCCEEHCCEEEECCCCCHHHHHHHHHCCCC
PRLNLVRTFTRVDGAVRYFNTGEADIPFEEVGTPTWDGLPLDHYLSLLDMLNPMHRLWSD
CCHHHHHHHHHHCCCEEEECCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
GHWNKLTVAHGCYWKKCSFCDVSLDYIGRYDAASAKVLVDRIEQIIAETGHTGFHLVDEA
CCCCEEEEECCCEECCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCC
APPKALRALAEELQLRNLAISWWGNIRFEKSFTPELCLQLADSGCIAISGGLEVASDRLL
CCHHHHHHHHHHHHHHHHEEEECCCEEECCCCCHHHHHHHCCCCCEEEECCHHHHHHHHH
DLMKKGVSVDQVARVTRAFTDAGVLVHAYLMYGFPTQTVQDTVDALEYVRQLFAEGCIQS
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
GYFHRFACTVHSPVGMNPAEYGIKLQPLPPGKFAKNDVQFIDPTGVDHNSLGKALNKALY
CCEEEEEEEECCCCCCCHHHCCEEEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHH
NYMHGIGLDSDVRSWFSEKVPRPTVARHKISKALSGQF
HHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MISADTTRPRILSVIPPMTQLNTPYPATAYLTGFLRSRGFQSEQTDLALALVLELLSPTG
CCCCCCCCCCHHHHCCCHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
LPKIKAAAEAIAGKKRSNTLKIFLNEFDRYLASIGPAIALLQGRDGSIAHRICSRAFLPE
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCC
GPRFASLDNYIDEDGGDPLAWAFGSLGVQDRARHLATLYLNDLADVLREAVDTRFEFVRY
CCCCCCHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AESLAQSQASFNPLATALAAPKTLVDETLEKLTLQAIERSQPEVVLISVPFPGSVYAAFR
HHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH
IAQTIKAKNPKIVTVLGGGYVNTELRELAEPRVFDYFDYVTLDDGEMPLLALFEHLAGKR
HHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCCEEHCCEEEECCCCCHHHHHHHHHCCCC
PRLNLVRTFTRVDGAVRYFNTGEADIPFEEVGTPTWDGLPLDHYLSLLDMLNPMHRLWSD
CCHHHHHHHHHHCCCEEEECCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
GHWNKLTVAHGCYWKKCSFCDVSLDYIGRYDAASAKVLVDRIEQIIAETGHTGFHLVDEA
CCCCEEEEECCCEECCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCC
APPKALRALAEELQLRNLAISWWGNIRFEKSFTPELCLQLADSGCIAISGGLEVASDRLL
CCHHHHHHHHHHHHHHHHEEEECCCEEECCCCCHHHHHHHCCCCCEEEECCHHHHHHHHH
DLMKKGVSVDQVARVTRAFTDAGVLVHAYLMYGFPTQTVQDTVDALEYVRQLFAEGCIQS
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
GYFHRFACTVHSPVGMNPAEYGIKLQPLPPGKFAKNDVQFIDPTGVDHNSLGKALNKALY
CCEEEEEEEECCCCCCCHHHCCEEEECCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHH
NYMHGIGLDSDVRSWFSEKVPRPTVARHKISKALSGQF
HHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]