| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907469
Identifier: 71907469
GI number: 71907469
Start: 1979386
End: 1980393
Strand: Reverse
Name: 71907469
Synonym: Daro_1840
Alternate gene names: NA
Gene position: 1980393-1979386 (Counterclockwise)
Preceding gene: 71907470
Following gene: 71907468
Centisome position: 44.0
GC content: 62.6
Gene sequence:
>1008_bases ATGCTTTTCCAGCCAGCCATCATCGCGCTGCTGATGGCCGCCGGCGTGGCGGTGCTGATGCTGCTCGCCGCAGCCCCCTT TGCCGTGCAGGTGATCCGCCACTGGGACATCCATAGCGGATCGGAGCGCCAACTGGCGCTGGAACGCCGCACCTACCTGT TCTCGACCTTGCTGTCCTTCGTCATGCTCGCCCAGCTGGCGGCCCTTCTGCTCTTCGTTTTCAACGCCGACCGGCTGTCG GTGATGTTCGTCGGCGCCATGTGCGCGGTCGGCACCCTCAACGTCAATGGCTACGGTTTTCCATCGCTGATCGCGCAGAT GGCCGTATTTTTCCTGGCCGCCATGTGGCTAGCCATCAACCATGTCGATACCCAGGCTCGAGATTACCCGCTGGTCCGCA TCAAGTACGCCTTGTTGCCGCTCCTGCTGCCCGTGCTGGCCATCAGTTTCTGGCTGGAATTCCAGTATTTCTCGGCCCTC AAGGCCAACGTGATCACCTCGTGCTGCGGCAGCATGTTCTCAGGGGAAGCCAAAACCATCGCCGCCGAAGCCTCCGGCCT CGAACCCCTGCCGGCGCTTTGGCTGTTCTACACCAGCATGGCCGCCGCCATCGGCGTAGCGCTGTGGCACTGGCGGCGGG CAAGCCGGGCCAGCGGTTATCTGCTGGCCCTGAGCAGCGCTGGCGGTTTCGTTGCCGCCATCACCGGCGTGCTGTCCTTC ATTTCGCTCTACATCTACGAGCACCCGCATCACCATTGCCCGTTCTGCATCTTGAAACCGGAATACGACTACCAGGGCTA CTGGCTCTACATTCCGCTTTTCGTCGCCACGGCGGCCGGGCTGGGCGCCGGCGCCACGCAGCCCTTCGCCCGAGTCCCCA GCCTGGCAAAAATCATCCCGGCCATTTCCAGCCGGCTTTCCGGGGTGGCTGCGGCCGGCTATATTCTGTTCACTGCACTG GCTACCTGGTTTGTGCTGACCTCCAACCTGATCCTGATCGAACACTGA
Upstream 100 bases:
>100_bases GCAAGACGGTGTTGCTGACCAGCCACGACCCGCTGGTTGTCGAGTCGAGTGCCGTGCATCGCGTCGTCGGCATGCGCGAC GGCCGGTTGACCGAAGCCTG
Downstream 100 bases:
>100_bases GATGCGCGTTTTTCTTCTGATCGCCGCCCTGCTCCTGTCGGCCTGCGGCAATGAGGCACCGAAGGCCAATATCAACATTG GCAGCATCGCCCCGACTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MLFQPAIIALLMAAGVAVLMLLAAAPFAVQVIRHWDIHSGSERQLALERRTYLFSTLLSFVMLAQLAALLLFVFNADRLS VMFVGAMCAVGTLNVNGYGFPSLIAQMAVFFLAAMWLAINHVDTQARDYPLVRIKYALLPLLLPVLAISFWLEFQYFSAL KANVITSCCGSMFSGEAKTIAAEASGLEPLPALWLFYTSMAAAIGVALWHWRRASRASGYLLALSSAGGFVAAITGVLSF ISLYIYEHPHHHCPFCILKPEYDYQGYWLYIPLFVATAAGLGAGATQPFARVPSLAKIIPAISSRLSGVAAAGYILFTAL ATWFVLTSNLILIEH
Sequences:
>Translated_335_residues MLFQPAIIALLMAAGVAVLMLLAAAPFAVQVIRHWDIHSGSERQLALERRTYLFSTLLSFVMLAQLAALLLFVFNADRLS VMFVGAMCAVGTLNVNGYGFPSLIAQMAVFFLAAMWLAINHVDTQARDYPLVRIKYALLPLLLPVLAISFWLEFQYFSAL KANVITSCCGSMFSGEAKTIAAEASGLEPLPALWLFYTSMAAAIGVALWHWRRASRASGYLLALSSAGGFVAAITGVLSF ISLYIYEHPHHHCPFCILKPEYDYQGYWLYIPLFVATAAGLGAGATQPFARVPSLAKIIPAISSRLSGVAAAGYILFTAL ATWFVLTSNLILIEH >Mature_335_residues MLFQPAIIALLMAAGVAVLMLLAAAPFAVQVIRHWDIHSGSERQLALERRTYLFSTLLSFVMLAQLAALLLFVFNADRLS VMFVGAMCAVGTLNVNGYGFPSLIAQMAVFFLAAMWLAINHVDTQARDYPLVRIKYALLPLLLPVLAISFWLEFQYFSAL KANVITSCCGSMFSGEAKTIAAEASGLEPLPALWLFYTSMAAAIGVALWHWRRASRASGYLLALSSAGGFVAAITGVLSF ISLYIYEHPHHHCPFCILKPEYDYQGYWLYIPLFVATAAGLGAGATQPFARVPSLAKIIPAISSRLSGVAAAGYILFTAL ATWFVLTSNLILIEH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36465; Mature: 36465
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFQPAIIALLMAAGVAVLMLLAAAPFAVQVIRHWDIHSGSERQLALERRTYLFSTLLSF CCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH VMLAQLAALLLFVFNADRLSVMFVGAMCAVGTLNVNGYGFPSLIAQMAVFFLAAMWLAIN HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHH HVDTQARDYPLVRIKYALLPLLLPVLAISFWLEFQYFSALKANVITSCCGSMFSGEAKTI HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE AAEASGLEPLPALWLFYTSMAAAIGVALWHWRRASRASGYLLALSSAGGFVAAITGVLSF EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHH ISLYIYEHPHHHCPFCILKPEYDYQGYWLYIPLFVATAAGLGAGATQPFARVPSLAKIIP HHHHHHCCCCCCCCEEEECCCCCCCCEEEEHHHHHHHHHCCCCCCCCHHHHCCHHHHHHH AISSRLSGVAAAGYILFTALATWFVLTSNLILIEH HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC >Mature Secondary Structure MLFQPAIIALLMAAGVAVLMLLAAAPFAVQVIRHWDIHSGSERQLALERRTYLFSTLLSF CCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH VMLAQLAALLLFVFNADRLSVMFVGAMCAVGTLNVNGYGFPSLIAQMAVFFLAAMWLAIN HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHH HVDTQARDYPLVRIKYALLPLLLPVLAISFWLEFQYFSALKANVITSCCGSMFSGEAKTI HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE AAEASGLEPLPALWLFYTSMAAAIGVALWHWRRASRASGYLLALSSAGGFVAAITGVLSF EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHH ISLYIYEHPHHHCPFCILKPEYDYQGYWLYIPLFVATAAGLGAGATQPFARVPSLAKIIP HHHHHHCCCCCCCCEEEECCCCCCCCEEEEHHHHHHHHHCCCCCCCCHHHHCCHHHHHHH AISSRLSGVAAAGYILFTALATWFVLTSNLILIEH HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA