| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
Click here to switch to the map view.
The map label for this gene is 71907467
Identifier: 71907467
GI number: 71907467
Start: 1978328
End: 1978705
Strand: Reverse
Name: 71907467
Synonym: Daro_1838
Alternate gene names: NA
Gene position: 1978705-1978328 (Counterclockwise)
Preceding gene: 71907468
Following gene: 71907466
Centisome position: 43.96
GC content: 64.55
Gene sequence:
>378_bases ATGATGACCGAAGAGATGATGAAGCAGATGCCGCACATGATGAGCACGGCAGGCCACATGATGACCAAGCCGATGGCCAC CGGGGCGATGATGGCCGGGGCCGGCTTCGCTGCCGGCAAGGGGCTGCTCGGCCGGGCCGTGCTGCACAACCCGCTGGCCC TGCTGGCGGTCGGCGCTGCTGGAGGAATTGCCGCCGGCTTCCTTCTGTTCAAGTACCAGAAGGAAATCGTCGAGGGCCTG TCGAAGGCGACCGGCATGGGCAAGGATTTTGCGCTGCACCAGAAAGAAAACCTGAACGACCTGATGGCCGAAGCTCAGGA CAAGATCGAGGGCAACCCGCCACCGGCCGCTCCGGCCAGCGAAACCCCGGCGGCCTGA
Upstream 100 bases:
>100_bases GCGAAGGCTGCCGCGGGATTTTCGAGATGTTGCATGACATCAAGGAAACGCCGGTTCAGAATGACCAGAATCAATCGAAC AAATCCTGAAAGGAAGCGCC
Downstream 100 bases:
>100_bases CGGAGGCCACATGACGCAAGCTGCCGAACTGGCACAACGTATCGTCGTTTTGCACCGTGAGCCAGGCTACCTGCGCCTCG AACTACCGGCCGAAATTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MMTEEMMKQMPHMMSTAGHMMTKPMATGAMMAGAGFAAGKGLLGRAVLHNPLALLAVGAAGGIAAGFLLFKYQKEIVEGL SKATGMGKDFALHQKENLNDLMAEAQDKIEGNPPPAAPASETPAA
Sequences:
>Translated_125_residues MMTEEMMKQMPHMMSTAGHMMTKPMATGAMMAGAGFAAGKGLLGRAVLHNPLALLAVGAAGGIAAGFLLFKYQKEIVEGL SKATGMGKDFALHQKENLNDLMAEAQDKIEGNPPPAAPASETPAA >Mature_125_residues MMTEEMMKQMPHMMSTAGHMMTKPMATGAMMAGAGFAAGKGLLGRAVLHNPLALLAVGAAGGIAAGFLLFKYQKEIVEGL SKATGMGKDFALHQKENLNDLMAEAQDKIEGNPPPAAPASETPAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12942; Mature: 12942
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 11.2 %Met (Translated Protein) 11.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 11.2 %Met (Mature Protein) 11.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTEEMMKQMPHMMSTAGHMMTKPMATGAMMAGAGFAAGKGLLGRAVLHNPLALLAVGAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHCCHHHHHHCCH GGIAAGFLLFKYQKEIVEGLSKATGMGKDFALHQKENLNDLMAEAQDKIEGNPPPAAPAS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHCCCCCCCCCCCC ETPAA CCCCC >Mature Secondary Structure MMTEEMMKQMPHMMSTAGHMMTKPMATGAMMAGAGFAAGKGLLGRAVLHNPLALLAVGAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHCCHHHHHHCCH GGIAAGFLLFKYQKEIVEGLSKATGMGKDFALHQKENLNDLMAEAQDKIEGNPPPAAPAS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHCCCCCCCCCCCC ETPAA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA