| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907421
Identifier: 71907421
GI number: 71907421
Start: 1929303
End: 1929833
Strand: Reverse
Name: 71907421
Synonym: Daro_1791
Alternate gene names: NA
Gene position: 1929833-1929303 (Counterclockwise)
Preceding gene: 71907424
Following gene: 71907420
Centisome position: 42.87
GC content: 61.02
Gene sequence:
>531_bases ATGAGCCCACTGCGCATCCTTCCCCTGTTGCTCGCCAGCCTCTTCGCCGTTCAGGCCGACGCCGCCGATGCCCCGCGCCG GAAATCCGGGCTGTGGGAAATGAAAACCCAGATGGCCGGCATGCCCTCGCAGGGTCCGATGCAGATGTGCGTCGATCAGG CCAGCGACAACGTGATGCAGGAACGCGCCAAGGAAAAGGCCAATTGCCCGGTCACGGATGTCAGCCGCGGCGCCGGCAAA GTGACCATCCACGCCGTCTGCAAGCATGAGGGCGTGACCAGCACCAGCGATTCAGTCATCACCGGCGATTTCGACTCGGC CTACCGCAACGACATGGTGATCCGCTACGATCCGCCCCAGCACGGCATGAAGGAAATGAAGATGGTTCAGGAAGCTCGCT GGCTCGGCCCCTGCAAGGCCGGCCAGAAGCCGGGTGACGTGATCATGCCGGGCATGCAGAAATTCAACATGCAGGAAATG ATGAACGATCCGCAGGTCCGTGAAATGATGAAGCGCCAGCAAAAGCAGTAA
Upstream 100 bases:
>100_bases GAGCGCCATGCCGGTTCCCGTAAAAAGCGCGGATTATCCCATGACGCATTCCCCAAAGCAGACTACGATTATTACTAGCC ACTCTTCAGGAAATTCCGCC
Downstream 100 bases:
>100_bases GGCACCCCATATAATCAGCGTTTTCTTATGAACGAGACCACCATGCGCCGCCTACTCCTCGCCTGCCTCCTTGCCGCCAG CCAGTTCGCCCACGCTGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MSPLRILPLLLASLFAVQADAADAPRRKSGLWEMKTQMAGMPSQGPMQMCVDQASDNVMQERAKEKANCPVTDVSRGAGK VTIHAVCKHEGVTSTSDSVITGDFDSAYRNDMVIRYDPPQHGMKEMKMVQEARWLGPCKAGQKPGDVIMPGMQKFNMQEM MNDPQVREMMKRQQKQ
Sequences:
>Translated_176_residues MSPLRILPLLLASLFAVQADAADAPRRKSGLWEMKTQMAGMPSQGPMQMCVDQASDNVMQERAKEKANCPVTDVSRGAGK VTIHAVCKHEGVTSTSDSVITGDFDSAYRNDMVIRYDPPQHGMKEMKMVQEARWLGPCKAGQKPGDVIMPGMQKFNMQEM MNDPQVREMMKRQQKQ >Mature_175_residues SPLRILPLLLASLFAVQADAADAPRRKSGLWEMKTQMAGMPSQGPMQMCVDQASDNVMQERAKEKANCPVTDVSRGAGKV TIHAVCKHEGVTSTSDSVITGDFDSAYRNDMVIRYDPPQHGMKEMKMVQEARWLGPCKAGQKPGDVIMPGMQKFNMQEMM NDPQVREMMKRQQKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19632; Mature: 19501
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 10.2 %Met (Translated Protein) 12.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 9.7 %Met (Mature Protein) 12.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLRILPLLLASLFAVQADAADAPRRKSGLWEMKTQMAGMPSQGPMQMCVDQASDNVMQ CCHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH ERAKEKANCPVTDVSRGAGKVTIHAVCKHEGVTSTSDSVITGDFDSAYRNDMVIRYDPPQ HHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEECCCCHHHHCCEEEEECCCH HGMKEMKMVQEARWLGPCKAGQKPGDVIMPGMQKFNMQEMMNDPQVREMMKRQQKQ HHHHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHCCHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure SPLRILPLLLASLFAVQADAADAPRRKSGLWEMKTQMAGMPSQGPMQMCVDQASDNVMQ CHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH ERAKEKANCPVTDVSRGAGKVTIHAVCKHEGVTSTSDSVITGDFDSAYRNDMVIRYDPPQ HHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEECCCCHHHHCCEEEEECCCH HGMKEMKMVQEARWLGPCKAGQKPGDVIMPGMQKFNMQEMMNDPQVREMMKRQQKQ HHHHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHCCHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA