Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is 71907391

Identifier: 71907391

GI number: 71907391

Start: 1892750

End: 1893202

Strand: Reverse

Name: 71907391

Synonym: Daro_1761

Alternate gene names: NA

Gene position: 1893202-1892750 (Counterclockwise)

Preceding gene: 71907392

Following gene: 71907390

Centisome position: 42.06

GC content: 62.03

Gene sequence:

>453_bases
ATGTATCAGAAAATCTTTGTCGCCATCGACGACAGCCCGACCTCGCAGAAGGCATTGGCCGAAGCCATCAATCTGGCCTG
GATGTCGAATGCGGCGCTGTGCATCGCCCATGCCGCCGACGAAAGCCTGCTCGCCCAGCACGGTATGGGCTTGGGGAGTT
ACATCGACGTCGACCGCACCAAAAAAGCCATTCGCGACACCTCGCAAGCCCTGCTCGATGCAGCCGGCAAGCAGGCGGCC
GAAGCCGGTGTGACGGCTGAAATCCGTCTGCTCGAAGCCACCGACAAGCGGGTGGCCGAACAGATCGCCAGCGGCGCCGA
AGACTTCAGTGCCGACCTGATCGTTGTCGGCACCCATGGCCGACGCGGCGTTGCCCGCCTGCTCGTCGGTTCGGTTGCCG
AAAATCTGGTCCGTATTGCCCACACCTCGCTGCTGATGGTTCGGTCGCACTAA

Upstream 100 bases:

>100_bases
ATTCCATCGCGCTGTGCACCCTGATGGGCTTCTTCATCACGGCACAAGCCTATGTCTGGCCCTTTACGGCCATGGTCCTC
AAATAATCGGAGCCGCACAC

Downstream 100 bases:

>100_bases
GCAACACCCCGGAGCGCGCCACCCCGGGCGCTCCGGGAATACCCCAAATGGCGGAACAGCCAAACTTTGCTACGTTAGCG
GTTCTGGGCATTTCGCCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: USP MJ0531 [H]

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MYQKIFVAIDDSPTSQKALAEAINLAWMSNAALCIAHAADESLLAQHGMGLGSYIDVDRTKKAIRDTSQALLDAAGKQAA
EAGVTAEIRLLEATDKRVAEQIASGAEDFSADLIVVGTHGRRGVARLLVGSVAENLVRIAHTSLLMVRSH

Sequences:

>Translated_150_residues
MYQKIFVAIDDSPTSQKALAEAINLAWMSNAALCIAHAADESLLAQHGMGLGSYIDVDRTKKAIRDTSQALLDAAGKQAA
EAGVTAEIRLLEATDKRVAEQIASGAEDFSADLIVVGTHGRRGVARLLVGSVAENLVRIAHTSLLMVRSH
>Mature_150_residues
MYQKIFVAIDDSPTSQKALAEAINLAWMSNAALCIAHAADESLLAQHGMGLGSYIDVDRTKKAIRDTSQALLDAAGKQAA
EAGVTAEIRLLEATDKRVAEQIASGAEDFSADLIVVGTHGRRGVARLLVGSVAENLVRIAHTSLLMVRSH

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 15893; Mature: 15893

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQKIFVAIDDSPTSQKALAEAINLAWMSNAALCIAHAADESLLAQHGMGLGSYIDVDRT
CCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCCCCEECHHHH
KKAIRDTSQALLDAAGKQAAEAGVTAEIRLLEATDKRVAEQIASGAEDFSADLIVVGTHG
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEECCC
RRGVARLLVGSVAENLVRIAHTSLLMVRSH
CHHHHHHHHHHHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure
MYQKIFVAIDDSPTSQKALAEAINLAWMSNAALCIAHAADESLLAQHGMGLGSYIDVDRT
CCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCCCCEECHHHH
KKAIRDTSQALLDAAGKQAAEAGVTAEIRLLEATDKRVAEQIASGAEDFSADLIVVGTHG
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEECCC
RRGVARLLVGSVAENLVRIAHTSLLMVRSH
CHHHHHHHHHHHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]