| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is ppc [H]
Identifier: 71907389
GI number: 71907389
Start: 1889266
End: 1892022
Strand: Reverse
Name: ppc [H]
Synonym: Daro_1759
Alternate gene names: 71907389
Gene position: 1892022-1889266 (Counterclockwise)
Preceding gene: 71907390
Following gene: 71907388
Centisome position: 42.03
GC content: 64.82
Gene sequence:
>2757_bases ATGCACGACGCCTCCCCCAGCAAGGACGAACCCCTTCGCACCGATATCCGCCTGCTCGGCCGTATCCTCGGCGATACCGT GCGCGAACAGGAGGGCGAGTCGGTTTTCGACATCGTCGAGCGCGTCCGCCAGACTGCCGTCCGGTTCGCCCGCGATGGCG ACCCGGCCGCCCGCGACGAACTTGCCGCCCTGCTCGACCCGCTGCCTGGCGACACGACGCAAGCCGTCGTCCGTGCCTTC AGCTATTTCCTGCAACTGGCCAATATTGCCGAGGACGAACACCACATCCGTCGGCGCCGTGCCCACGATCTGGCCGGCTC ACCGCCGCGCGAAGGCAGTTTGATCTTCGCGCTGGACGCACTGTCGACCGCCGCTGTCTCGCCGGAAGCCATCGCCGACT TCTTCGCCCATGCCGTCGTCGCCCCGGTGCTCACCGCCCACCCGACTGAAGTCCAGCGCCAGAGCCTGATCCGCAATCAT CGCGACCTCGCCCATCTGCTCGATCAGCGCGAACGCCTGCAAATGACCCCGGAAGAAGAGGCCGAGAACGACCTCGCACT GGCCAACGCCATCCTTACCCTGTGGCAATCGCGCATGCTGCGTCCGGTTCGCCTGAAGGTGCTCGATGAGGTCAAGAACG GCATCACCTATTTCAAGGAAACCTTCTTCACCGAATTGCCGCGTCTCTACATCCAGGCGACGGAACAACTGCAGAAGCGT TACCCGGAAAAAACCTGGGCCCTGCCGCCCTTCTTCCGGGTTGGCAGCTGGATCGGCGGCGACCGCGACGGCAACCCCTT CGTCACCGCCGACATCCTGCGCGAAGCCCTGCGCCTGCAATCGTCCGCCGCACTGAACCACTACCTCAACGAAGTCCATG AACTGGGTGGCGAATTGCCGCTGTCCGACCTGCTGGTCAAGGTCACGCCGGAACTCCTGGCCCTGGCCGAGCATTCCACC GATCACTCGCCGCAACGCGCCGACGAGCCCTACCGCCGTGCGCTATCCGGCATCTACGCCCGCCTTGCCGCAACGGCCCG CGCCCTCGACCAGTTCGAGCCGGTTCGCCACGAGATCGGCCATGCCACGCCATACGACACCCCGGATGCCCTGCGTGCCG ACCTGAAGCTCCTCGCCAACTCGCTCAAGCTCAACGGCAGCGCCAAGCTGGCCGGTGGACGCCTGCGCCGCCTGCTGCGG GGCGTGCAGATCTTCGGTTTCCACCTGGCGCCGATCGATCTGCGCCAGAACTCCGACGTCCACGCCCGCAGCGTCGCCGA ACTGCTGGCCGGTGCCGGCCGCTGCCCGGATTACGAAGCCCTCTCCGAAGCCGAGCGCATCAAGCTGCTGGTCGACGAAA TCAGCACGCCGCGTCCGCTGTATTCGCCGTACCTGAACTATTCGGAAGAAACGCAGGGCGAACTGGCCATCTTCTTCGCC GCCCGCGAACTGCGCCAGAAATACGGTTCCGCCGCCCTGCCCAATTGCATCATCTCGAAGACCGATGGCGTTTCCGACCT GCTCGAACTCGCCCTGCTGCTCAAGGAGTCCGGCCTGCTGTTGCCGGGTGCCAAGCCGCAACTCAAGGTCAACATCATCC CGCTATTCGAAACCATCGAAGACTTGCAGAAGAGCGCCGCCACCATGGCCGGCGTCTTCGCCATTCCGGCCTACCGCGAA CTGATTGCCGGCCGCGGTGACGAACACGAAGTCATGCTCGGCTACTCAGACAGCAACAAGGATGGCGGCTTCCTGACTTC GGGTTGGGAGCTCTACAAGGCCGAAATCGAATTGGCCCGCATCTTCGGCCAGCACGGTGTCCGCCTGCGTCTGTTCCACG GCCGCGGCGGCTCCGTCGGCCGCGGTGGCGGCCCGACCTATCACGCCATCCTCGCCCAGCCCGCTGGCGCCGTGGCCGGC CAGATCCGCCTGACCGAACAGGGCGAAGTGATCTCGACCAAGTACGGCAATGCCGATACCGGCCGCCGCAATCTGGAAGT GCTGCTCGCCGCCACGCTGGAAGCGAGCCTGACCGACCACGAAAACCGTGTCGAACCGGCCGAGCAGTTCCACGCCGTGA TGGACGAGCTTTCCGCCCGCGCCTTCAATGCCTACCGTGGCCTGGTCTATGAAACCCCGGGCTTCACCACCTATTTCCGC CAGTCGACAGTCGTCTCCGAAATCGCCTCGCTGAACATCGGCAGCCGCCCCGCGTCGCGCAAGGCCTCCGAGCGCATCGA AGACCTGCGCGCCATTCCTTGGGTTTTCTCGTGGGCACAATGTCGCCTGATGCTGCCCGGCTGGTACGGCTTCGGTGCTG CGGTGGAGGGCTACCTGCAAGCCAATCCGGCCGGTCTGGCCACGCTGCGCCGCATGGTCCACGCCTGGCCCTTCTTCAAG AGCCTGCTGTCCAACATGGACATGGTGCTGGCCAAGACCGATCTCGCCATCGCCTCGCGCTATGCCGAACTGGTCGCCGA TGTCGAACTGCGCGAGCACATTTTCAGCCGCATCAAGGCCGAATGGGCGCTGACCCGCCAGCACCTGCTGGCCATTCTGG AACAGGACGAATTCCTGGCCGACAATCCGCTGCTTGCCCGTTCGCTGCAACTGCGCTCGCCCTACATGGACCCGCTCAAC CATCTGCAAGTCGAGTTGCTCAAACGCCACCGCGCCGGCGACACCGATGAGCGTCTGGCCCGCGGCATTCACCTGACCAT CAACGGCATCGCATCCGGATTGCGTAACAGCGGGTAA
Upstream 100 bases:
>100_bases GGGGCCCAGCCCCGATGTTTTTTCCGCTTGCCTTACTGGAAAGCGGCCGCCAGAATATCGAGATAAACAAATAATATCGA TAACCAACAGGAACAGCACC
Downstream 100 bases:
>100_bases AATCACAGGATGCCTACCACTATCAAACGCACCGTTTTTTTCGTGTCCGACGGCACCGGCCTGACAGTCGAAGCCCTCGG CCACAGCCTGATGACCCAGT
Product: phosphoenolpyruvate carboxylase
Products: NA
Alternate protein names: PEPC; PEPCase [H]
Number of amino acids: Translated: 918; Mature: 918
Protein sequence:
>918_residues MHDASPSKDEPLRTDIRLLGRILGDTVREQEGESVFDIVERVRQTAVRFARDGDPAARDELAALLDPLPGDTTQAVVRAF SYFLQLANIAEDEHHIRRRRAHDLAGSPPREGSLIFALDALSTAAVSPEAIADFFAHAVVAPVLTAHPTEVQRQSLIRNH RDLAHLLDQRERLQMTPEEEAENDLALANAILTLWQSRMLRPVRLKVLDEVKNGITYFKETFFTELPRLYIQATEQLQKR YPEKTWALPPFFRVGSWIGGDRDGNPFVTADILREALRLQSSAALNHYLNEVHELGGELPLSDLLVKVTPELLALAEHST DHSPQRADEPYRRALSGIYARLAATARALDQFEPVRHEIGHATPYDTPDALRADLKLLANSLKLNGSAKLAGGRLRRLLR GVQIFGFHLAPIDLRQNSDVHARSVAELLAGAGRCPDYEALSEAERIKLLVDEISTPRPLYSPYLNYSEETQGELAIFFA ARELRQKYGSAALPNCIISKTDGVSDLLELALLLKESGLLLPGAKPQLKVNIIPLFETIEDLQKSAATMAGVFAIPAYRE LIAGRGDEHEVMLGYSDSNKDGGFLTSGWELYKAEIELARIFGQHGVRLRLFHGRGGSVGRGGGPTYHAILAQPAGAVAG QIRLTEQGEVISTKYGNADTGRRNLEVLLAATLEASLTDHENRVEPAEQFHAVMDELSARAFNAYRGLVYETPGFTTYFR QSTVVSEIASLNIGSRPASRKASERIEDLRAIPWVFSWAQCRLMLPGWYGFGAAVEGYLQANPAGLATLRRMVHAWPFFK SLLSNMDMVLAKTDLAIASRYAELVADVELREHIFSRIKAEWALTRQHLLAILEQDEFLADNPLLARSLQLRSPYMDPLN HLQVELLKRHRAGDTDERLARGIHLTINGIASGLRNSG
Sequences:
>Translated_918_residues MHDASPSKDEPLRTDIRLLGRILGDTVREQEGESVFDIVERVRQTAVRFARDGDPAARDELAALLDPLPGDTTQAVVRAF SYFLQLANIAEDEHHIRRRRAHDLAGSPPREGSLIFALDALSTAAVSPEAIADFFAHAVVAPVLTAHPTEVQRQSLIRNH RDLAHLLDQRERLQMTPEEEAENDLALANAILTLWQSRMLRPVRLKVLDEVKNGITYFKETFFTELPRLYIQATEQLQKR YPEKTWALPPFFRVGSWIGGDRDGNPFVTADILREALRLQSSAALNHYLNEVHELGGELPLSDLLVKVTPELLALAEHST DHSPQRADEPYRRALSGIYARLAATARALDQFEPVRHEIGHATPYDTPDALRADLKLLANSLKLNGSAKLAGGRLRRLLR GVQIFGFHLAPIDLRQNSDVHARSVAELLAGAGRCPDYEALSEAERIKLLVDEISTPRPLYSPYLNYSEETQGELAIFFA ARELRQKYGSAALPNCIISKTDGVSDLLELALLLKESGLLLPGAKPQLKVNIIPLFETIEDLQKSAATMAGVFAIPAYRE LIAGRGDEHEVMLGYSDSNKDGGFLTSGWELYKAEIELARIFGQHGVRLRLFHGRGGSVGRGGGPTYHAILAQPAGAVAG QIRLTEQGEVISTKYGNADTGRRNLEVLLAATLEASLTDHENRVEPAEQFHAVMDELSARAFNAYRGLVYETPGFTTYFR QSTVVSEIASLNIGSRPASRKASERIEDLRAIPWVFSWAQCRLMLPGWYGFGAAVEGYLQANPAGLATLRRMVHAWPFFK SLLSNMDMVLAKTDLAIASRYAELVADVELREHIFSRIKAEWALTRQHLLAILEQDEFLADNPLLARSLQLRSPYMDPLN HLQVELLKRHRAGDTDERLARGIHLTINGIASGLRNSG >Mature_918_residues MHDASPSKDEPLRTDIRLLGRILGDTVREQEGESVFDIVERVRQTAVRFARDGDPAARDELAALLDPLPGDTTQAVVRAF SYFLQLANIAEDEHHIRRRRAHDLAGSPPREGSLIFALDALSTAAVSPEAIADFFAHAVVAPVLTAHPTEVQRQSLIRNH RDLAHLLDQRERLQMTPEEEAENDLALANAILTLWQSRMLRPVRLKVLDEVKNGITYFKETFFTELPRLYIQATEQLQKR YPEKTWALPPFFRVGSWIGGDRDGNPFVTADILREALRLQSSAALNHYLNEVHELGGELPLSDLLVKVTPELLALAEHST DHSPQRADEPYRRALSGIYARLAATARALDQFEPVRHEIGHATPYDTPDALRADLKLLANSLKLNGSAKLAGGRLRRLLR GVQIFGFHLAPIDLRQNSDVHARSVAELLAGAGRCPDYEALSEAERIKLLVDEISTPRPLYSPYLNYSEETQGELAIFFA ARELRQKYGSAALPNCIISKTDGVSDLLELALLLKESGLLLPGAKPQLKVNIIPLFETIEDLQKSAATMAGVFAIPAYRE LIAGRGDEHEVMLGYSDSNKDGGFLTSGWELYKAEIELARIFGQHGVRLRLFHGRGGSVGRGGGPTYHAILAQPAGAVAG QIRLTEQGEVISTKYGNADTGRRNLEVLLAATLEASLTDHENRVEPAEQFHAVMDELSARAFNAYRGLVYETPGFTTYFR QSTVVSEIASLNIGSRPASRKASERIEDLRAIPWVFSWAQCRLMLPGWYGFGAAVEGYLQANPAGLATLRRMVHAWPFFK SLLSNMDMVLAKTDLAIASRYAELVADVELREHIFSRIKAEWALTRQHLLAILEQDEFLADNPLLARSLQLRSPYMDPLN HLQVELLKRHRAGDTDERLARGIHLTINGIASGLRNSG
Specific function: Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle [H]
COG id: COG2352
COG function: function code C; Phosphoenolpyruvate carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEPCase type 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790393, Length=932, Percent_Identity=36.3733905579399, Blast_Score=459, Evalue=1e-130,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021135 - InterPro: IPR018129 - InterPro: IPR022805 - InterPro: IPR015813 [H]
Pfam domain/function: PF00311 PEPcase [H]
EC number: =4.1.1.31 [H]
Molecular weight: Translated: 101965; Mature: 101965
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS00781 PEPCASE_1 ; PS00393 PEPCASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDASPSKDEPLRTDIRLLGRILGDTVREQEGESVFDIVERVRQTAVRFARDGDPAARDE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH LAALLDPLPGDTTQAVVRAFSYFLQLANIAEDEHHIRRRRAHDLAGSPPREGSLIFALDA HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEH LSTAAVSPEAIADFFAHAVVAPVLTAHPTEVQRQSLIRNHRDLAHLLDQRERLQMTPEEE HHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH AENDLALANAILTLWQSRMLRPVRLKVLDEVKNGITYFKETFFTELPRLYIQATEQLQKR HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YPEKTWALPPFFRVGSWIGGDRDGNPFVTADILREALRLQSSAALNHYLNEVHELGGELP CCCCCCCCCCHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LSDLLVKVTPELLALAEHSTDHSPQRADEPYRRALSGIYARLAATARALDQFEPVRHEIG HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HATPYDTPDALRADLKLLANSLKLNGSAKLAGGRLRRLLRGVQIFGFHLAPIDLRQNSDV CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEEEECEEECCCCCCH HARSVAELLAGAGRCPDYEALSEAERIKLLVDEISTPRPLYSPYLNYSEETQGELAIFFA HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCEEEHHH ARELRQKYGSAALPNCIISKTDGVSDLLELALLLKESGLLLPGAKPQLKVNIIPLFETIE HHHHHHHHCCCCCCCHHEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHH DLQKSAATMAGVFAIPAYRELIAGRGDEHEVMLGYSDSNKDGGFLTSGWELYKAEIELAR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEECCCHHHHHHHHHHHH IFGQHGVRLRLFHGRGGSVGRGGGPTYHAILAQPAGAVAGQIRLTEQGEVISTKYGNADT HHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCEEEECCCCCEEEECCCCCCC GRRNLEVLLAATLEASLTDHENRVEPAEQFHAVMDELSARAFNAYRGLVYETPGFTTYFR CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHH QSTVVSEIASLNIGSRPASRKASERIEDLRAIPWVFSWAQCRLMLPGWYGFGAAVEGYLQ HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHC ANPAGLATLRRMVHAWPFFKSLLSNMDMVLAKTDLAIASRYAELVADVELREHIFSRIKA CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EWALTRQHLLAILEQDEFLADNPLLARSLQLRSPYMDPLNHLQVELLKRHRAGDTDERLA HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHH RGIHLTINGIASGLRNSG CCCEEEEHHHHHHHCCCC >Mature Secondary Structure MHDASPSKDEPLRTDIRLLGRILGDTVREQEGESVFDIVERVRQTAVRFARDGDPAARDE CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH LAALLDPLPGDTTQAVVRAFSYFLQLANIAEDEHHIRRRRAHDLAGSPPREGSLIFALDA HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEH LSTAAVSPEAIADFFAHAVVAPVLTAHPTEVQRQSLIRNHRDLAHLLDQRERLQMTPEEE HHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH AENDLALANAILTLWQSRMLRPVRLKVLDEVKNGITYFKETFFTELPRLYIQATEQLQKR HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YPEKTWALPPFFRVGSWIGGDRDGNPFVTADILREALRLQSSAALNHYLNEVHELGGELP CCCCCCCCCCHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC LSDLLVKVTPELLALAEHSTDHSPQRADEPYRRALSGIYARLAATARALDQFEPVRHEIG HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HATPYDTPDALRADLKLLANSLKLNGSAKLAGGRLRRLLRGVQIFGFHLAPIDLRQNSDV CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEEEECEEECCCCCCH HARSVAELLAGAGRCPDYEALSEAERIKLLVDEISTPRPLYSPYLNYSEETQGELAIFFA HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCEEEHHH ARELRQKYGSAALPNCIISKTDGVSDLLELALLLKESGLLLPGAKPQLKVNIIPLFETIE HHHHHHHHCCCCCCCHHEECCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHH DLQKSAATMAGVFAIPAYRELIAGRGDEHEVMLGYSDSNKDGGFLTSGWELYKAEIELAR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEECCCHHHHHHHHHHHH IFGQHGVRLRLFHGRGGSVGRGGGPTYHAILAQPAGAVAGQIRLTEQGEVISTKYGNADT HHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCEEEECCCCCEEEECCCCCCC GRRNLEVLLAATLEASLTDHENRVEPAEQFHAVMDELSARAFNAYRGLVYETPGFTTYFR CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHH QSTVVSEIASLNIGSRPASRKASERIEDLRAIPWVFSWAQCRLMLPGWYGFGAAVEGYLQ HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHC ANPAGLATLRRMVHAWPFFKSLLSNMDMVLAKTDLAIASRYAELVADVELREHIFSRIKA CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EWALTRQHLLAILEQDEFLADNPLLARSLQLRSPYMDPLNHLQVELLKRHRAGDTDERLA HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHH RGIHLTINGIASGLRNSG CCCEEEEHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA