| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907359
Identifier: 71907359
GI number: 71907359
Start: 1857021
End: 1858100
Strand: Reverse
Name: 71907359
Synonym: Daro_1729
Alternate gene names: NA
Gene position: 1858100-1857021 (Counterclockwise)
Preceding gene: 71907360
Following gene: 71907357
Centisome position: 41.28
GC content: 57.78
Gene sequence:
>1080_bases ATGATTGAGGACTTCCTCAGCTATAACTCGGTCATCGATGCGCTGACCGCGCATGTTGCACTGCTGAATGCACAAGGCGA AATCGTCGCCGTCAATGAGGCTTGGCGTACGTTTTCCGAAAACAACGGCAGCAGCTTGCCGGCTCATGGCATCGGCTGCA ACTACATCGGCATGCTCGACAAACTGGCACATGCGCCGCATAACTCCGGTCTCGGCAGCCATGAGGATATTCGTATTGCC ATCTCCGTAATCGCCGGCATTACCAGCGTTCTCGATGGCCAGTCAGCCAAATTCCAGATCGAATACCCATGCCATGCTCC CTGGGAGCAACGCTGGTTCCTGATGACCGTCACGCCGCTACCTGGCGGCACAGCGGTCCGGGCCATTGTCTCGCATGAAA ACATCACTCCGCTGAAAGCAGCCGAAACCGAGGTGCGCGCACAAGGCAGCCGCCTCGCCCTGGCATTCAGCAGCACGGTG GAAGCCATCGCGCTGGCGATCGAAAAACGCGACCCCTACACGGCAGGCCATCAGCGTCAGGTGGCGACACTCGCCCGGAA AATCGGCCAAATCATGCAACTGAACGACGACCAGCTCTTTGGCCTGCACCTTGGCGCAACCGTCCATGACATTGGCAAAA TATCAATCCCTGCGGAAATCCTCAACCGGCCTGGTGCCCTGTCTTCCCCCGAATATTCAATCATTCGCTGTCACCCGGAA ATCGGCCATGAAATCCTGCGCGGGGTAGACTTTCCCTGGCCGATCGCCAATATGGTTCTGCAACATCACGAACGGGTGGA TGGCAGCGGCTACCCGCATGGTCTCAAGGGCGACGAAATCTGCCTTGAGGCCAGAATCATCGGCGTTGCCGACGTTTTCG ATGCCATCATCTCTCACCGCCCCTATCGCCCCGGCCATCACATGGACGAAGCGCTGCGGGAACTCAAACAGGGACGTGGC AAACTCTACGATGCGGACGTTGTCGATGCCGGGCTGTCATTCTTCACCCAAGTCAGTACGGCGTGGCACCATGCGCATGG TCCGGAAGACGAAAACTCGCATCCGCTAACGCATTTCTGA
Upstream 100 bases:
>100_bases CCACCAATCATTTGCCAATTATTACTAAAGGCGTATCCTGAGTCCGCTTGCACAATTCAAGGCCTGAAACCGGGCCCAAT AACGATACTCAAGAACAGCA
Downstream 100 bases:
>100_bases CCGCTACCGACCTAGCTACTTGCTGCGGTCGACCCGAAAAATCAACCGATTTCCCATTTGATCATCGCCGCCCCCCTCGA ATGAGCGGCAAGTAATCGCC
Product: metal-dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MIEDFLSYNSVIDALTAHVALLNAQGEIVAVNEAWRTFSENNGSSLPAHGIGCNYIGMLDKLAHAPHNSGLGSHEDIRIA ISVIAGITSVLDGQSAKFQIEYPCHAPWEQRWFLMTVTPLPGGTAVRAIVSHENITPLKAAETEVRAQGSRLALAFSSTV EAIALAIEKRDPYTAGHQRQVATLARKIGQIMQLNDDQLFGLHLGATVHDIGKISIPAEILNRPGALSSPEYSIIRCHPE IGHEILRGVDFPWPIANMVLQHHERVDGSGYPHGLKGDEICLEARIIGVADVFDAIISHRPYRPGHHMDEALRELKQGRG KLYDADVVDAGLSFFTQVSTAWHHAHGPEDENSHPLTHF
Sequences:
>Translated_359_residues MIEDFLSYNSVIDALTAHVALLNAQGEIVAVNEAWRTFSENNGSSLPAHGIGCNYIGMLDKLAHAPHNSGLGSHEDIRIA ISVIAGITSVLDGQSAKFQIEYPCHAPWEQRWFLMTVTPLPGGTAVRAIVSHENITPLKAAETEVRAQGSRLALAFSSTV EAIALAIEKRDPYTAGHQRQVATLARKIGQIMQLNDDQLFGLHLGATVHDIGKISIPAEILNRPGALSSPEYSIIRCHPE IGHEILRGVDFPWPIANMVLQHHERVDGSGYPHGLKGDEICLEARIIGVADVFDAIISHRPYRPGHHMDEALRELKQGRG KLYDADVVDAGLSFFTQVSTAWHHAHGPEDENSHPLTHF >Mature_359_residues MIEDFLSYNSVIDALTAHVALLNAQGEIVAVNEAWRTFSENNGSSLPAHGIGCNYIGMLDKLAHAPHNSGLGSHEDIRIA ISVIAGITSVLDGQSAKFQIEYPCHAPWEQRWFLMTVTPLPGGTAVRAIVSHENITPLKAAETEVRAQGSRLALAFSSTV EAIALAIEKRDPYTAGHQRQVATLARKIGQIMQLNDDQLFGLHLGATVHDIGKISIPAEILNRPGALSSPEYSIIRCHPE IGHEILRGVDFPWPIANMVLQHHERVDGSGYPHGLKGDEICLEARIIGVADVFDAIISHRPYRPGHHMDEALRELKQGRG KLYDADVVDAGLSFFTQVSTAWHHAHGPEDENSHPLTHF
Specific function: Unknown
COG id: COG2206
COG function: function code T; HD-GYP domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR000160 - InterPro: IPR003607 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39259; Mature: 39259
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEDFLSYNSVIDALTAHVALLNAQGEIVAVNEAWRTFSENNGSSLPAHGIGCNYIGMLD CCHHHHHHHHHHHHHHHHHHEEECCCCEEEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHH KLAHAPHNSGLGSHEDIRIAISVIAGITSVLDGQSAKFQIEYPCHAPWEQRWFLMTVTPL HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEEECC PGGTAVRAIVSHENITPLKAAETEVRAQGSRLALAFSSTVEAIALAIEKRDPYTAGHQRQ CCCHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCHHH VATLARKIGQIMQLNDDQLFGLHLGATVHDIGKISIPAEILNRPGALSSPEYSIIRCHPE HHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCCCHHHHCCCCCCCCCCCEEEEECHH IGHEILRGVDFPWPIANMVLQHHERVDGSGYPHGLKGDEICLEARIIGVADVFDAIISHR HHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHCCC PYRPGHHMDEALRELKQGRGKLYDADVVDAGLSFFTQVSTAWHHAHGPEDENSHPLTHF CCCCCCHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MIEDFLSYNSVIDALTAHVALLNAQGEIVAVNEAWRTFSENNGSSLPAHGIGCNYIGMLD CCHHHHHHHHHHHHHHHHHHEEECCCCEEEEHHHHHHHCCCCCCCCCCCCCCCHHHHHHH KLAHAPHNSGLGSHEDIRIAISVIAGITSVLDGQSAKFQIEYPCHAPWEQRWFLMTVTPL HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEEEECC PGGTAVRAIVSHENITPLKAAETEVRAQGSRLALAFSSTVEAIALAIEKRDPYTAGHQRQ CCCHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCHHH VATLARKIGQIMQLNDDQLFGLHLGATVHDIGKISIPAEILNRPGALSSPEYSIIRCHPE HHHHHHHHHHHHCCCCCCEEEEEECCHHHHCCCCCCCHHHHCCCCCCCCCCCEEEEECHH IGHEILRGVDFPWPIANMVLQHHERVDGSGYPHGLKGDEICLEARIIGVADVFDAIISHR HHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHCCC PYRPGHHMDEALRELKQGRGKLYDADVVDAGLSFFTQVSTAWHHAHGPEDENSHPLTHF CCCCCCHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]