| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907316
Identifier: 71907316
GI number: 71907316
Start: 1815540
End: 1815935
Strand: Reverse
Name: 71907316
Synonym: Daro_1686
Alternate gene names: NA
Gene position: 1815935-1815540 (Counterclockwise)
Preceding gene: 71907317
Following gene: 71907315
Centisome position: 40.34
GC content: 62.88
Gene sequence:
>396_bases ATGAAAATCACCCTCGGTCTCGGTTGCGACCGGAACACGCCAGCGAGCACCATCGCGCAGGCGATTGGCGAAGCGCTGGC GGCGGCCAATGCCACGCCAGCCGATGTAGCGGGCGTCGCGTCGATTGACCTGAAGGCCGATGAGGTCGGGCTGCTTGAAG TGGCCGCCCAACACGGATGGATGATTGATTTCCATCCGGCGGCAGCGCTGGCGGCGGTCGAGGTCCCCACCCCCTCGGAA ACGGTCCGCAAATATACCGGCACCCCTTCGGTTTCGGAGGCGGCAGCCCTACTCGCTGCCCGTGCCGACCAGACCCATTT GATCATCGAAAAACACAAGTTGCGCGGCCCGGATGGGCGTAACGCGACTGTCTCCATTGCAAGGATTCCAGAATGA
Upstream 100 bases:
>100_bases ATTTTGCCGCCGTGCTGTGGATCAGCGATCGTGAGATGCCAAATGCGCTGGCTGCCCGCCTGGCCGGCAAACGGGTGGTC TATCGCCCGGCGCAAGCCGT
Downstream 100 bases:
>100_bases ATGAAACTCAGACGAAAACCGGGAAAATCATGTTGGTCGGCCTCGGCCCGGGCAGCAACGACCACCTGACCGCTCGTGCT CGCGCCGCCATCGCCGAAGC
Product: cobalamin (vitamin B12) biosynthesis CbiG protein
Products: NA
Alternate protein names: Cobalamin Biosynthesis Protein; Cobalamin Biosynthesis Protein CbiG; Bifunctional CbiH -Methyltransferase; CbiG Protein/Precorrin-3B; Precorrin Methylase; Cobalamin Biosynthesis CbiG Protein Truncated; Precorrin-3B; Bifunctional Cbih -Methyltransferase
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MKITLGLGCDRNTPASTIAQAIGEALAAANATPADVAGVASIDLKADEVGLLEVAAQHGWMIDFHPAAALAAVEVPTPSE TVRKYTGTPSVSEAAALLAARADQTHLIIEKHKLRGPDGRNATVSIARIPE
Sequences:
>Translated_131_residues MKITLGLGCDRNTPASTIAQAIGEALAAANATPADVAGVASIDLKADEVGLLEVAAQHGWMIDFHPAAALAAVEVPTPSE TVRKYTGTPSVSEAAALLAARADQTHLIIEKHKLRGPDGRNATVSIARIPE >Mature_131_residues MKITLGLGCDRNTPASTIAQAIGEALAAANATPADVAGVASIDLKADEVGLLEVAAQHGWMIDFHPAAALAAVEVPTPSE TVRKYTGTPSVSEAAALLAARADQTHLIIEKHKLRGPDGRNATVSIARIPE
Specific function: Unknown
COG id: COG2073
COG function: function code H; Cobalamin biosynthesis protein CbiG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13470; Mature: 13470
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITLGLGCDRNTPASTIAQAIGEALAAANATPADVAGVASIDLKADEVGLLEVAAQHGW CEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCC MIDFHPAAALAAVEVPTPSETVRKYTGTPSVSEAAALLAARADQTHLIIEKHKLRGPDGR EEEECCCCEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCC NATVSIARIPE CCEEEEEECCC >Mature Secondary Structure MKITLGLGCDRNTPASTIAQAIGEALAAANATPADVAGVASIDLKADEVGLLEVAAQHGW CEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCC MIDFHPAAALAAVEVPTPSETVRKYTGTPSVSEAAALLAARADQTHLIIEKHKLRGPDGR EEEECCCCEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCC NATVSIARIPE CCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA