| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is ilvB [H]
Identifier: 71907251
GI number: 71907251
Start: 1737010
End: 1738680
Strand: Reverse
Name: ilvB [H]
Synonym: Daro_1620
Alternate gene names: 71907251
Gene position: 1738680-1737010 (Counterclockwise)
Preceding gene: 71907252
Following gene: 71907250
Centisome position: 38.63
GC content: 60.8
Gene sequence:
>1671_bases ATGACTGAAACTCTCACCGGCGCGCAGATCACCGTTCGCCTGCTCGAACGCCAAGGCATTCGTACCGTTGCCGGTATTCC CGGCGGCGCCATCCTGCCAATCTACGATGCCCTCGGCCAATCAAGCGCCATCCACCATGTACTGGCCCGCCACGAACAGG GGGCCGGCTTCATGGCCCAGGGCATGGCCCGCTCTACCGGCCTGCCCGCTGTCTGCCTAGCGTCCTCCGGCCCAGGCGCG ACCAACCTGCTGACGGCCATTGCCGATGCCAAGCTCGATTCGATCCCGTTGGTTGCCATCACCGGCCAAGTGCCGAAGGC GATGATTGGTACCGATGCTTTTCAGGAGGTCGACACTTACGGACTCTCCATTCCGATCACCAAACACAACTTTCTCGTCT CCTCCCCCGAGGAATTGCTGGCGGTGATTCCCCGCGCCTTCGAAATTGCCACCTCAGGCCGCCCCGGCCCGGTGCTGGTC GACATCCCGAAAGATGTACAAACCCAGGCGATCGAAATTGGCGAATGGCCAGAGCCTGGTCGCGCCCAGCCAATCACTCC GACAGACCCGGCGTTGATCGCGCAGGCTACAGCAATGATCAATGCTGCCGAACGCCCGATTCTTTATCTCGGTGGTGGCG TTGTGCATTCCGGCGCAGCAAGGACGGCAGTCGATCTCGCCGAAAAATCCAATTTACCGACCGTCATGACCTTGATGGCA CTCGGCACCATGCCGGTCGATCACCCGCTGTCGCTCGGCATGCTGGGCATGCACGCTGCCCGTTACACCAACCTCGCACT TGAAGAATGCGACCTTCTGATCGCCGTCGGCGCCCGCTTCGATGACCGTGCCACCGGCAAGGTGGCCGCCTTTTGTCCCC AGGCGAAAATTATCCATATCGATATCGACCCGGCTGAACTGGACAAGATCAAGACTGCTCATCTCGGCATCGCTGCTGAT GTCCAGGAAGCGCTCACGCAGCTACTACCGGCCGTAGCTGACAACGACCGACAAGTCTGGGTGGATCGTAACAATACCTT GAAGGCAGAATTTCCTTTCGAGATGCCGGGACTCGACAACCCGCGCTCTCACTTTGGCTTGATTCGCACCGTCGCCGCCT GCCTGGACAATGAAGCCACTGTCACCACCGACGTCGGCCAGCACCAGATGTGGGTTGCCCAAGCCTACCCGCTGCGCCGG CCACGCCAGTGGCTGACTTCTGGCGGGCTGGGCACCATGGGCTTTGGTGTACCAGCGGCCATCGGCGCCGCTCTGGCTGA ACCGCAGCGCACCGTGGTCTGCTTCACCGGCGACGGTTCGATCCTGATGAACATCCAGGAACTGGTCACCGCCGCCGAGG AAAACGTGAACGTGAAAATTGTGCTCATGGACAACGCAACGCTCGGTCTGGTGCACCAGCAGCAGACACTGTTCTACGGC GAAAGACTGTTCGCCTCGCAATTCAAATCCTCGCCGGACTTCATCAAGATCGCACAAGGTTTCGGTATCGCAGCGGTCGA CCTCGATCTGGCCGCCAACCCTTGTGCAGCCCTGATGGAAGCCATCGCTCGCCCCGGCCCCTGCCTAATCCACGCCAGTA TCGATGCCGAGCAGAAGGTCTACCCCATGGTGCCACCGGGTGCCGCCAACCGTGACATGATTGGAGCCTGA
Upstream 100 bases:
>100_bases AGCAGAAGCAGCACAGAACCCCAACCCCCGCCGGCGCAAACCGGCGGGGGTTTTGTTTTGGAGCCCCACCGGTTGAGCCA CCAACCCAAAGGAAACCTCC
Downstream 100 bases:
>100_bases CATGAACGCCATAACGAAAAATGAAAACGATGCCCTTGCCCGGGCAGTGCTGGAAATCAACGTCAATAACCACCCGGGCG TGATGTCACACGTCGTCGGC
Product: acetolactate synthase catalytic subunit
Products: NA
Alternate protein names: AHAS-I; Acetohydroxy-acid synthase I large subunit; ALS-I [H]
Number of amino acids: Translated: 556; Mature: 555
Protein sequence:
>556_residues MTETLTGAQITVRLLERQGIRTVAGIPGGAILPIYDALGQSSAIHHVLARHEQGAGFMAQGMARSTGLPAVCLASSGPGA TNLLTAIADAKLDSIPLVAITGQVPKAMIGTDAFQEVDTYGLSIPITKHNFLVSSPEELLAVIPRAFEIATSGRPGPVLV DIPKDVQTQAIEIGEWPEPGRAQPITPTDPALIAQATAMINAAERPILYLGGGVVHSGAARTAVDLAEKSNLPTVMTLMA LGTMPVDHPLSLGMLGMHAARYTNLALEECDLLIAVGARFDDRATGKVAAFCPQAKIIHIDIDPAELDKIKTAHLGIAAD VQEALTQLLPAVADNDRQVWVDRNNTLKAEFPFEMPGLDNPRSHFGLIRTVAACLDNEATVTTDVGQHQMWVAQAYPLRR PRQWLTSGGLGTMGFGVPAAIGAALAEPQRTVVCFTGDGSILMNIQELVTAAEENVNVKIVLMDNATLGLVHQQQTLFYG ERLFASQFKSSPDFIKIAQGFGIAAVDLDLAANPCAALMEAIARPGPCLIHASIDAEQKVYPMVPPGAANRDMIGA
Sequences:
>Translated_556_residues MTETLTGAQITVRLLERQGIRTVAGIPGGAILPIYDALGQSSAIHHVLARHEQGAGFMAQGMARSTGLPAVCLASSGPGA TNLLTAIADAKLDSIPLVAITGQVPKAMIGTDAFQEVDTYGLSIPITKHNFLVSSPEELLAVIPRAFEIATSGRPGPVLV DIPKDVQTQAIEIGEWPEPGRAQPITPTDPALIAQATAMINAAERPILYLGGGVVHSGAARTAVDLAEKSNLPTVMTLMA LGTMPVDHPLSLGMLGMHAARYTNLALEECDLLIAVGARFDDRATGKVAAFCPQAKIIHIDIDPAELDKIKTAHLGIAAD VQEALTQLLPAVADNDRQVWVDRNNTLKAEFPFEMPGLDNPRSHFGLIRTVAACLDNEATVTTDVGQHQMWVAQAYPLRR PRQWLTSGGLGTMGFGVPAAIGAALAEPQRTVVCFTGDGSILMNIQELVTAAEENVNVKIVLMDNATLGLVHQQQTLFYG ERLFASQFKSSPDFIKIAQGFGIAAVDLDLAANPCAALMEAIARPGPCLIHASIDAEQKVYPMVPPGAANRDMIGA >Mature_555_residues TETLTGAQITVRLLERQGIRTVAGIPGGAILPIYDALGQSSAIHHVLARHEQGAGFMAQGMARSTGLPAVCLASSGPGAT NLLTAIADAKLDSIPLVAITGQVPKAMIGTDAFQEVDTYGLSIPITKHNFLVSSPEELLAVIPRAFEIATSGRPGPVLVD IPKDVQTQAIEIGEWPEPGRAQPITPTDPALIAQATAMINAAERPILYLGGGVVHSGAARTAVDLAEKSNLPTVMTLMAL GTMPVDHPLSLGMLGMHAARYTNLALEECDLLIAVGARFDDRATGKVAAFCPQAKIIHIDIDPAELDKIKTAHLGIAADV QEALTQLLPAVADNDRQVWVDRNNTLKAEFPFEMPGLDNPRSHFGLIRTVAACLDNEATVTTDVGQHQMWVAQAYPLRRP RQWLTSGGLGTMGFGVPAAIGAALAEPQRTVVCFTGDGSILMNIQELVTAAEENVNVKIVLMDNATLGLVHQQQTLFYGE RLFASQFKSSPDFIKIAQGFGIAAVDLDLAANPCAALMEAIARPGPCLIHASIDAEQKVYPMVPPGAANRDMIGA
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=485, Percent_Identity=27.0103092783505, Blast_Score=149, Evalue=8e-36, Organism=Homo sapiens, GI21361361, Length=545, Percent_Identity=23.8532110091743, Blast_Score=124, Evalue=3e-28, Organism=Escherichia coli, GI1790104, Length=553, Percent_Identity=63.2911392405063, Blast_Score=712, Evalue=0.0, Organism=Escherichia coli, GI87081685, Length=566, Percent_Identity=41.8727915194346, Blast_Score=447, Evalue=1e-127, Organism=Escherichia coli, GI1786717, Length=519, Percent_Identity=35.8381502890173, Blast_Score=308, Evalue=6e-85, Organism=Escherichia coli, GI1787096, Length=551, Percent_Identity=27.2232304900181, Blast_Score=176, Evalue=3e-45, Organism=Escherichia coli, GI1788716, Length=481, Percent_Identity=28.2744282744283, Blast_Score=150, Evalue=3e-37, Organism=Caenorhabditis elegans, GI17531299, Length=563, Percent_Identity=28.0639431616341, Blast_Score=147, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17531301, Length=563, Percent_Identity=28.0639431616341, Blast_Score=147, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17542570, Length=572, Percent_Identity=26.2237762237762, Blast_Score=133, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6323755, Length=576, Percent_Identity=41.8402777777778, Blast_Score=427, Evalue=1e-120, Organism=Saccharomyces cerevisiae, GI6320816, Length=501, Percent_Identity=24.750499001996, Blast_Score=108, Evalue=2e-24, Organism=Drosophila melanogaster, GI19922626, Length=483, Percent_Identity=27.9503105590062, Blast_Score=154, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 58751; Mature: 58620
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETLTGAQITVRLLERQGIRTVAGIPGGAILPIYDALGQSSAIHHVLARHEQGAGFMAQ CCCCCCCHHHHHEEHHHCCCEEECCCCCCCEEHHHHHCCCCHHHHHHHHHCCCCCCHHHH GMARSTGLPAVCLASSGPGATNLLTAIADAKLDSIPLVAITGQVPKAMIGTDAFQEVDTY HHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHCCHHHHHHHHC GLSIPITKHNFLVSSPEELLAVIPRAFEIATSGRPGPVLVDIPKDVQTQAIEIGEWPEPG CCEEEEECCCEEECCHHHHHHHHCHHHEEECCCCCCCEEEECCCCCCCCEEECCCCCCCC RAQPITPTDPALIAQATAMINAAERPILYLGGGVVHSGAARTAVDLAEKSNLPTVMTLMA CCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCEEECCCHHHHHHHHHHCCCCHHHHHHH LGTMPVDHPLSLGMLGMHAARYTNLALEECDLLIAVGARFDDRATGKVAAFCPQAKIIHI HCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEECCCCEEEEE DIDPAELDKIKTAHLGIAADVQEALTQLLPAVADNDRQVWVDRNNTLKAEFPFEMPGLDN ECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCCC PRSHFGLIRTVAACLDNEATVTTDVGQHQMWVAQAYPLRRPRQWLTSGGLGTMGFGVPAA CHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCHHHH IGAALAEPQRTVVCFTGDGSILMNIQELVTAAEENVNVKIVLMDNATLGLVHQQQTLFYG HHHHHCCCCEEEEEEECCCCEEEEHHHHHHHHHCCCCEEEEEECCCEEEEEECHHHHHHH ERLFASQFKSSPDFIKIAQGFGIAAVDLDLAANPCAALMEAIARPGPCLIHASIDAEQKV HHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCCCE YPMVPPGAANRDMIGA ECCCCCCCCCCCCCCC >Mature Secondary Structure TETLTGAQITVRLLERQGIRTVAGIPGGAILPIYDALGQSSAIHHVLARHEQGAGFMAQ CCCCCCHHHHHEEHHHCCCEEECCCCCCCEEHHHHHCCCCHHHHHHHHHCCCCCCHHHH GMARSTGLPAVCLASSGPGATNLLTAIADAKLDSIPLVAITGQVPKAMIGTDAFQEVDTY HHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHHHCCHHHHHHHHC GLSIPITKHNFLVSSPEELLAVIPRAFEIATSGRPGPVLVDIPKDVQTQAIEIGEWPEPG CCEEEEECCCEEECCHHHHHHHHCHHHEEECCCCCCCEEEECCCCCCCCEEECCCCCCCC RAQPITPTDPALIAQATAMINAAERPILYLGGGVVHSGAARTAVDLAEKSNLPTVMTLMA CCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCEEECCCHHHHHHHHHHCCCCHHHHHHH LGTMPVDHPLSLGMLGMHAARYTNLALEECDLLIAVGARFDDRATGKVAAFCPQAKIIHI HCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEECCCCEEEEE DIDPAELDKIKTAHLGIAADVQEALTQLLPAVADNDRQVWVDRNNTLKAEFPFEMPGLDN ECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCCC PRSHFGLIRTVAACLDNEATVTTDVGQHQMWVAQAYPLRRPRQWLTSGGLGTMGFGVPAA CHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCHHHH IGAALAEPQRTVVCFTGDGSILMNIQELVTAAEENVNVKIVLMDNATLGLVHQQQTLFYG HHHHHCCCCEEEEEEECCCCEEEEHHHHHHHHHCCCCEEEEEECCCEEEEEECHHHHHHH ERLFASQFKSSPDFIKIAQGFGIAAVDLDLAANPCAALMEAIARPGPCLIHASIDAEQKV HHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCCCE YPMVPPGAANRDMIGA ECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2989782; 2989781; 7686882; 9278503 [H]