| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907221
Identifier: 71907221
GI number: 71907221
Start: 1705644
End: 1706192
Strand: Reverse
Name: 71907221
Synonym: Daro_1589
Alternate gene names: NA
Gene position: 1706192-1705644 (Counterclockwise)
Preceding gene: 71907222
Following gene: 71907218
Centisome position: 37.91
GC content: 56.83
Gene sequence:
>549_bases ATGAACGATTCAATCCTTTTCCTGATCGGCACGCTGCTTATCGTCTGGCTGTCGCGCAAGCCACTGCGCAAACCGGGTAG CCACGGCTTCTACCGTTTCTTTGCCTGGGAGGCCATTCTCGGCCTGATCGTGCTCAATCACGGTGTCTGGGGGGATGACC CTTATTCGCCGCACCAGTTCACGTCATGGATGTTGATGCTGCTCAGCATTTTCCTGGTTGCCGAGGGCACGCGCACCCTG CGCCGCCACGGTGCTGCCAATAAAAAACGCGATGACGGCTCGTTCTACGAATTCGAGAAGACCACCCAACTCGTTTCCCA CGGCATCTTCAGCCACATTCGCCACCCGATGTACGCGTCTTTGCTGGCCCTGGCCTGGGGTGCCTACTTTCAGGATCCAA GCGCGCTCGGTACGCTCATCGTCGGTATCGCCACATTTTCACTTTGGCTGACCGCGATCACCGACGAAAAGGAATGCCTG GCCTACTTTGGCCCCTCTTACGCCGACTACATGCAGCGGACCAAACGCTTCATTCCCTATTTACTCTGA
Upstream 100 bases:
>100_bases GGATCGCCGATGTGGGCCATGCACAGCATCCGCGAAAGCGCCGGCGTCCTTGATCACGCCTATATGATTTCTGCCTTGAC CACGAGTTTCACGGACTGAG
Downstream 100 bases:
>100_bases AGCGGCGCTTGATCCCATCATTTCGTTGCAGGTCGCCCGGCCAAAGGTTTCGGCCTTCTTCGGGCTGGAAATCTGCGGCT CTTCATAGATGCGCTTGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MNDSILFLIGTLLIVWLSRKPLRKPGSHGFYRFFAWEAILGLIVLNHGVWGDDPYSPHQFTSWMLMLLSIFLVAEGTRTL RRHGAANKKRDDGSFYEFEKTTQLVSHGIFSHIRHPMYASLLALAWGAYFQDPSALGTLIVGIATFSLWLTAITDEKECL AYFGPSYADYMQRTKRFIPYLL
Sequences:
>Translated_182_residues MNDSILFLIGTLLIVWLSRKPLRKPGSHGFYRFFAWEAILGLIVLNHGVWGDDPYSPHQFTSWMLMLLSIFLVAEGTRTL RRHGAANKKRDDGSFYEFEKTTQLVSHGIFSHIRHPMYASLLALAWGAYFQDPSALGTLIVGIATFSLWLTAITDEKECL AYFGPSYADYMQRTKRFIPYLL >Mature_182_residues MNDSILFLIGTLLIVWLSRKPLRKPGSHGFYRFFAWEAILGLIVLNHGVWGDDPYSPHQFTSWMLMLLSIFLVAEGTRTL RRHGAANKKRDDGSFYEFEKTTQLVSHGIFSHIRHPMYASLLALAWGAYFQDPSALGTLIVGIATFSLWLTAITDEKECL AYFGPSYADYMQRTKRFIPYLL
Specific function: Unknown
COG id: COG2020
COG function: function code O; Putative protein-S-isoprenylcysteine methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20842; Mature: 20842
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDSILFLIGTLLIVWLSRKPLRKPGSHGFYRFFAWEAILGLIVLNHGVWGDDPYSPHQF CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH TSWMLMLLSIFLVAEGTRTLRRHGAANKKRDDGSFYEFEKTTQLVSHGIFSHIRHPMYAS HHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHH LLALAWGAYFQDPSALGTLIVGIATFSLWLTAITDEKECLAYFGPSYADYMQRTKRFIPY HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCC LL CC >Mature Secondary Structure MNDSILFLIGTLLIVWLSRKPLRKPGSHGFYRFFAWEAILGLIVLNHGVWGDDPYSPHQF CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH TSWMLMLLSIFLVAEGTRTLRRHGAANKKRDDGSFYEFEKTTQLVSHGIFSHIRHPMYAS HHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHH LLALAWGAYFQDPSALGTLIVGIATFSLWLTAITDEKECLAYFGPSYADYMQRTKRFIPY HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCC LL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA