| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907094
Identifier: 71907094
GI number: 71907094
Start: 1587233
End: 1588279
Strand: Reverse
Name: 71907094
Synonym: Daro_1462
Alternate gene names: NA
Gene position: 1588279-1587233 (Counterclockwise)
Preceding gene: 71907095
Following gene: 71907093
Centisome position: 35.29
GC content: 69.15
Gene sequence:
>1047_bases ATGCGCCTCTACCGCGCCCTGCTGATCGCTGCCGCCCTGCTCGCCCTGATCGTCATCGGCTTGGGCGCCTACGTCCGGCT GTCCGATGCCGGCCTCGGCTGCCCCGACTGGCCGGGTTGTTACGGCCACTGGCTGGGCGTTCCCGAAAGCGGGCATGAAC ATCTGGCCGCCCAGGCCAATTTCCCGCATCAACCGGTGGATACGGGCAAGGCCTGGAAGGAAATGGTCCATCGCTATTTC GCCGGCACGCTGGGCCTGCTCATCCTGGCCATCTGCTGGCTCGCCTGGCGCCCCGCCCTGCGCTGCCGGCGGTCGCCCCT CCTGCCTACCATCCTGCTCGGTCTCGTCGGCCTGCAGGCCGCCCTCGGCATGTGGACCGTCACGCTGCTGCTCAAGCCGG TGATCGTCACCCTGCACCTGCTCGGCGGCATGAGCACGCTGGCCCTGCTGGTCGTCCTCAATTGGCGTGAGCGACAGGCC TCCCTGCCGCGCGCTGCCGGCCCGACGCTGCGCCTGGCAGCCCGCCTCGCGCTGCTTGCCGTGATCGGCCAGATTGCATT GGGCGGCTGGGTCAGCAGCAACTACGCCGGTCTCGCCTGCCCCGACTTGCCGCGCTGCCAGGGCCTATGGCAACCGTCCA TGGACTTCGGCCATGCCTTCACCGTCGTCCGCGACCTGGGTTACAACGCCCACGGCCAGCTCCTGAGCACCGAGGCGCTG ACCACCATCCACTGGGTTCATCGCCTGGGTGCCATCCTTGTCGCCGGAACCGTCCTTGCCCTGGCCATCGCCCTCGGCAC CGGCAGCGACCGGGAACAACGACGCTGGGCCGGCGCACTGCTCGCCATGCTCGGCCTGCAAATCGCCCTTGGCATCGGCA ATGTGCTGCTCTCGCTCCCGCTGCCCATGGCCGTGGCCCACACGCTCGGTGCGGCCGGCTTGTTCAGCGTACTGCTGACC ATCAACCTGCGACTTCCGGCCATCGATCCCGTCGCCGAGCGCTCCCGGCACGCCTGCCCGGAACCTGGTCTGCACACCCC CGCCTAA
Upstream 100 bases:
>100_bases CGATGCCTTGGCCCGGCGTACCTTCCGCTATTCCATCCTCTACCTGACCCTGCTCTTCGCGGCGCTGTTCGCCGACCGGC TGATCGTCCTCTAGGCCGCC
Downstream 100 bases:
>100_bases TGCGTGGTCTGCCAATTCAGGGCGCTATACTGGAAGACATGAACGGCATCGCATGGACCGGTATGCGCCGGGTGCCAAAC GTGACTGAAGGACGATGCCT
Product: cytochrome oxidase assembly
Products: NA
Alternate protein names: Cytochrome Oxidase Assembly Protein; Cytochrome C Oxidase Assembly Protein; Cytochrome Oxidase Assembly Family Protein/ Protein FtsY; Protein Required For Cytochrome Oxidase Assembly; Cytochrome Aa3 Oxidase Assembly Protein; Cytochrome Aa3 Oxidase Assembly Protein Related CtaA; Heme O Oxygenase Transmembrane Protein; Heme A Synthase Cytochrome Oxidase Biogenesis -CtaA; Cytochrome Oxidase Assembly Family Protein; Cytochrome C Oxidase Subunit XV Assembly Protein; Heme O Monooxygenase; Heme O Oxygenase; HemeA Synthase
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MRLYRALLIAAALLALIVIGLGAYVRLSDAGLGCPDWPGCYGHWLGVPESGHEHLAAQANFPHQPVDTGKAWKEMVHRYF AGTLGLLILAICWLAWRPALRCRRSPLLPTILLGLVGLQAALGMWTVTLLLKPVIVTLHLLGGMSTLALLVVLNWRERQA SLPRAAGPTLRLAARLALLAVIGQIALGGWVSSNYAGLACPDLPRCQGLWQPSMDFGHAFTVVRDLGYNAHGQLLSTEAL TTIHWVHRLGAILVAGTVLALAIALGTGSDREQRRWAGALLAMLGLQIALGIGNVLLSLPLPMAVAHTLGAAGLFSVLLT INLRLPAIDPVAERSRHACPEPGLHTPA
Sequences:
>Translated_348_residues MRLYRALLIAAALLALIVIGLGAYVRLSDAGLGCPDWPGCYGHWLGVPESGHEHLAAQANFPHQPVDTGKAWKEMVHRYF AGTLGLLILAICWLAWRPALRCRRSPLLPTILLGLVGLQAALGMWTVTLLLKPVIVTLHLLGGMSTLALLVVLNWRERQA SLPRAAGPTLRLAARLALLAVIGQIALGGWVSSNYAGLACPDLPRCQGLWQPSMDFGHAFTVVRDLGYNAHGQLLSTEAL TTIHWVHRLGAILVAGTVLALAIALGTGSDREQRRWAGALLAMLGLQIALGIGNVLLSLPLPMAVAHTLGAAGLFSVLLT INLRLPAIDPVAERSRHACPEPGLHTPA >Mature_348_residues MRLYRALLIAAALLALIVIGLGAYVRLSDAGLGCPDWPGCYGHWLGVPESGHEHLAAQANFPHQPVDTGKAWKEMVHRYF AGTLGLLILAICWLAWRPALRCRRSPLLPTILLGLVGLQAALGMWTVTLLLKPVIVTLHLLGGMSTLALLVVLNWRERQA SLPRAAGPTLRLAARLALLAVIGQIALGGWVSSNYAGLACPDLPRCQGLWQPSMDFGHAFTVVRDLGYNAHGQLLSTEAL TTIHWVHRLGAILVAGTVLALAIALGTGSDREQRRWAGALLAMLGLQIALGIGNVLLSLPLPMAVAHTLGAAGLFSVLLT INLRLPAIDPVAERSRHACPEPGLHTPA
Specific function: Unknown
COG id: COG1612
COG function: function code O; Uncharacterized protein required for cytochrome oxidase assembly
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37101; Mature: 37101
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLYRALLIAAALLALIVIGLGAYVRLSDAGLGCPDWPGCYGHWLGVPESGHEHLAAQAN CHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHCCCCCCCCHHHHHHCCC FPHQPVDTGKAWKEMVHRYFAGTLGLLILAICWLAWRPALRCRRSPLLPTILLGLVGLQA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ALGMWTVTLLLKPVIVTLHLLGGMSTLALLVVLNWRERQASLPRAAGPTLRLAARLALLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHH VIGQIALGGWVSSNYAGLACPDLPRCQGLWQPSMDFGHAFTVVRDLGYNAHGQLLSTEAL HHHHHHHCCHHCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH TTIHWVHRLGAILVAGTVLALAIALGTGSDREQRRWAGALLAMLGLQIALGIGNVLLSLP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LPMAVAHTLGAAGLFSVLLTINLRLPAIDPVAERSRHACPEPGLHTPA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MRLYRALLIAAALLALIVIGLGAYVRLSDAGLGCPDWPGCYGHWLGVPESGHEHLAAQAN CHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHCCCCCCCCHHHHHHCCC FPHQPVDTGKAWKEMVHRYFAGTLGLLILAICWLAWRPALRCRRSPLLPTILLGLVGLQA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ALGMWTVTLLLKPVIVTLHLLGGMSTLALLVVLNWRERQASLPRAAGPTLRLAARLALLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHH VIGQIALGGWVSSNYAGLACPDLPRCQGLWQPSMDFGHAFTVVRDLGYNAHGQLLSTEAL HHHHHHHCCHHCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHH TTIHWVHRLGAILVAGTVLALAIALGTGSDREQRRWAGALLAMLGLQIALGIGNVLLSLP HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LPMAVAHTLGAAGLFSVLLTINLRLPAIDPVAERSRHACPEPGLHTPA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA