Click here to switch to the map view.

The map label for this gene is nifT [H]

Identifier: 71907044

GI number: 71907044

Start: 1541162

End: 1541404

Strand: Reverse

Name: nifT [H]

Synonym: Daro_1412

Alternate gene names: 71907044

Gene position: 1541404-1541162 (Counterclockwise)

Preceding gene: 71907045

Following gene: 71907043

Centisome position: 34.25

GC content: 59.26

Gene sequence:

>243_bases
ATGCAGGAGCGTTACATGGCCAACATCATGATCCAGCAAGGCGACAAGGGCGGGCTGGTGTTTTACCTCCCGAAGCGCGA
TCTGGAAGCGTCCATCGAGTCCATCGAATTCGACACCGCAGACAAATGGGGTGGCGAACTGAAACTGGACAACGGTGGCA
CTTACTACATCGACCCGATTGCCAAGCCGCCCCGCCTGCCCGTTTCCCTACGTGCCAAGCGCCTCGGCGCTGCCGAAGAC
TAG

Upstream 100 bases:

>100_bases
GAGCAACTCGACAAGGAAACGATCGGCATGGGCACCACCGACTTCAACTTCGACCTGGTTCGCTAAACGGACCACCGGCG
GAGCCCTGGCTCCGCCGGTC

Downstream 100 bases:

>100_bases
CCCGTTGAACCTGCCCGCCCAGCCAGCCGCCTGTCTGACAACAGTGGCCGGCAAAGCGGATTTAAAGGAGAGCATCATGG
CAATGAAAATCGACCCCGAC

Product: NifT/FixU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 80

Protein sequence:

>80_residues
MQERYMANIMIQQGDKGGLVFYLPKRDLEASIESIEFDTADKWGGELKLDNGGTYYIDPIAKPPRLPVSLRAKRLGAAED

Sequences:

>Translated_80_residues
MQERYMANIMIQQGDKGGLVFYLPKRDLEASIESIEFDTADKWGGELKLDNGGTYYIDPIAKPPRLPVSLRAKRLGAAED
>Mature_80_residues
MQERYMANIMIQQGDKGGLVFYLPKRDLEASIESIEFDTADKWGGELKLDNGGTYYIDPIAKPPRLPVSLRAKRLGAAED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009727 [H]

Pfam domain/function: PF06988 NifT [H]

EC number: NA

Molecular weight: Translated: 8973; Mature: 8973

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQERYMANIMIQQGDKGGLVFYLPKRDLEASIESIEFDTADKWGGELKLDNGGTYYIDPI
CCCCEEEEEEEEECCCCCEEEEECCCCCCCCHHEEECCCCCCCCCEEEECCCCEEEECCC
AKPPRLPVSLRAKRLGAAED
CCCCCCCCEEECCCCCCCCC
>Mature Secondary Structure
MQERYMANIMIQQGDKGGLVFYLPKRDLEASIESIEFDTADKWGGELKLDNGGTYYIDPI
CCCCEEEEEEEEECCCCCEEEEECCCCCCCCHHEEECCCCCCCCCEEEECCCCEEEECCC
AKPPRLPVSLRAKRLGAAED
CCCCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2644218; 3863780 [H]