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The map label for this gene is nifY [H]

Identifier: 71907042

GI number: 71907042

Start: 1540085

End: 1540816

Strand: Reverse

Name: nifY [H]

Synonym: Daro_1410

Alternate gene names: 71907042

Gene position: 1540816-1540085 (Counterclockwise)

Preceding gene: 71907043

Following gene: 71907041

Centisome position: 34.23

GC content: 65.16

Gene sequence:

>732_bases
ATGTCCGACACCCCCATCGCCTCCCGCGAAGCAGCGCTGCGCATCGCCCTCGCCGCCCGCGCCCTGAATGGTCTCGATGT
CCGAGCCCTGGTCGGCGCGCTCGTCGAAAAGCTCGAATCCCCGCTCACCGAGGTCAAGCTCGGCACGCTGACCGTCGAAG
ACCTGCGCATCATCCTGGCCGGTGACTTCGCCGAGCAAGGCTGCCACGTCGGCGTCGAAGGCGAAGCGCTCAAGGAAGCC
GTCCGCCTGCTCTGGGGTCAGGGCGTGGAGAACAACGATTTTCCGGCGGTCGACAGCTATACCGAGGGCGAAATGCCCGG
CTCGCTGCGTGTCGCATTCGCCGCCAACCGTGGCGAAACCCTCGATGGCCATTTCGGTTCCTGCGAGCGCTTTCTCGTCT
ATCAGGTCAGCCCGGAACAGATCAAGCTGATCGCCATACGTACTACCGTCGAAGCCGACACCGCCGAAGACAAGAACGCC
GCCCGCTCGGCGCTGATCAACGACTGCCAGATCGTCTATGTGCAGTCGATCGGCGGCCCGGCCGCGGCCAAGGTAGTGCG
GGCCGGCGTTCATCCGGTCAAGAAACCGGAAGGCGGCAAGGCCCGTGAAGTACTGGTCGAACTGCAAGGCCGCCTGGCCA
GTCCGCCGCCGTGGCTGGCCCAGATCATGGGCGTACCGGCCGCCTCGCTGGCCCGTTTTGAAGAGGAACTGGAAAGCGAG
GAATCGGCATGA

Upstream 100 bases:

>100_bases
CCGGCTGCATCAGCCCGGCCTGAGCAAAGTCTTGAGCCGAACGCCGGCGCAGCCAAATCTGCACCGGTGCTCCACTGAAG
ACTTTCCCCTGGAGCCCATC

Downstream 100 bases:

>100_bases
TCTCCCCGACCCAACTCTTTCGCGTCGGCGAAGCCACCATGCTTGATGCCCGCGCTGCCTCGCTACGCCAGCGCTTCCCC
GAGCTGCATTTCACCGAATG

Product: dinitrogenase iron-molybdenum cofactor biosynthesis

Products: oxidized ferredoxin; NH3; ADP; phosphate

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MSDTPIASREAALRIALAARALNGLDVRALVGALVEKLESPLTEVKLGTLTVEDLRIILAGDFAEQGCHVGVEGEALKEA
VRLLWGQGVENNDFPAVDSYTEGEMPGSLRVAFAANRGETLDGHFGSCERFLVYQVSPEQIKLIAIRTTVEADTAEDKNA
ARSALINDCQIVYVQSIGGPAAAKVVRAGVHPVKKPEGGKAREVLVELQGRLASPPPWLAQIMGVPAASLARFEEELESE
ESA

Sequences:

>Translated_243_residues
MSDTPIASREAALRIALAARALNGLDVRALVGALVEKLESPLTEVKLGTLTVEDLRIILAGDFAEQGCHVGVEGEALKEA
VRLLWGQGVENNDFPAVDSYTEGEMPGSLRVAFAANRGETLDGHFGSCERFLVYQVSPEQIKLIAIRTTVEADTAEDKNA
ARSALINDCQIVYVQSIGGPAAAKVVRAGVHPVKKPEGGKAREVLVELQGRLASPPPWLAQIMGVPAASLARFEEELESE
ESA
>Mature_242_residues
SDTPIASREAALRIALAARALNGLDVRALVGALVEKLESPLTEVKLGTLTVEDLRIILAGDFAEQGCHVGVEGEALKEAV
RLLWGQGVENNDFPAVDSYTEGEMPGSLRVAFAANRGETLDGHFGSCERFLVYQVSPEQIKLIAIRTTVEADTAEDKNAA
RSALINDCQIVYVQSIGGPAAAKVVRAGVHPVKKPEGGKAREVLVELQGRLASPPPWLAQIMGVPAASLARFEEELESEE
SA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifX/nifY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003731 [H]

Pfam domain/function: PF02579 Nitro_FeMo-Co [H]

EC number: 1.18.6.1

Molecular weight: Translated: 25881; Mature: 25750

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTPIASREAALRIALAARALNGLDVRALVGALVEKLESPLTEVKLGTLTVEDLRIILA
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHEECEEEHHHEEEEEE
GDFAEQGCHVGVEGEALKEAVRLLWGQGVENNDFPAVDSYTEGEMPGSLRVAFAANRGET
CCHHHCCCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
LDGHFGSCERFLVYQVSPEQIKLIAIRTTVEADTAEDKNAARSALINDCQIVYVQSIGGP
CCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCH
AAAKVVRAGVHPVKKPEGGKAREVLVELQGRLASPPPWLAQIMGVPAASLARFEEELESE
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHC
ESA
CCC
>Mature Secondary Structure 
SDTPIASREAALRIALAARALNGLDVRALVGALVEKLESPLTEVKLGTLTVEDLRIILA
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHEECEEEHHHEEEEEE
GDFAEQGCHVGVEGEALKEAVRLLWGQGVENNDFPAVDSYTEGEMPGSLRVAFAANRGET
CCHHHCCCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
LDGHFGSCERFLVYQVSPEQIKLIAIRTTVEADTAEDKNAARSALINDCQIVYVQSIGGP
CCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCH
AAAKVVRAGVHPVKKPEGGKAREVLVELQGRLASPPPWLAQIMGVPAASLARFEEELESE
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHC
ESA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced ferredoxin; H+; N2; ATP

Specific reaction: 3 reduced ferredoxin + 6 H+ + N2 + n ATP = 3 oxidized ferredoxin + 2 NH3 + n ADP + n phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2644218 [H]