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The map label for this gene is 71907040

Identifier: 71907040

GI number: 71907040

Start: 1539077

End: 1539835

Strand: Reverse

Name: 71907040

Synonym: Daro_1408

Alternate gene names: NA

Gene position: 1539835-1539077 (Counterclockwise)

Preceding gene: 71907041

Following gene: 71907039

Centisome position: 34.21

GC content: 66.01

Gene sequence:

>759_bases
ATGACGAGTGAAAAAACGCTTGCCGACGCCGGCATTGGCCGGCTGGGATTGTGTTCCGGTTGCAGCTATTTTCCGGACTA
CCTGAACAGCCGCCGCTGCAAGCCGGGCGATGCCTGCATCCGCGCCCACAGCGGTCGTCAGATCGACCGTTTCCTGCGGG
CCAACCCTGAGCTGGCCGCCAATTACCTGGGCGACATCTTCTGGGAACGCCGGGCCATTGCGACCCGCTACGCCCCGGTC
GACCTTATTTTTGCGCTGAAATCCGATACCGACGAGGTCGTCCGCCGCGTCGTGGCCATGCGCCTGCCGGTCGATCAACT
GATCTCGATGATCCACGACCCGGATCGCGAAGTGCGCCTCTCGGTGGCCGCTCGCCTGCCTGAAGCGCAGCTGATCCAGC
TGATCAACGACCCCGACTACCTGATCCGCGCCACGATCGCCCGCCGCCTGCCACACGGCCAGCTCGCCAAGTTGATCAAG
GATAGCGAGCGCGAAGTCCGCAAGGTCGTCGCCTCCCGCCTGCCCCCCTTTGCCCTGCACATGCTGGCCAAGGACCCGGA
GCCGGAAGTCCGCGCCATTGTCGCCGAGCGCGCCCTGCCGGGCCTCGCCATCGCACTGCTCCAGGACGAAGAATGGTGGG
TCCGCCTGGCTGCCGTCGGCAACGCCCCGCTCGACTCCCTGCCGCCGCTGACCAACGACCCGGAAACGGAAGTCCGCGAT
GCCGCCTTGGCCCGTCTCGCCGAACGAAATACTGCCTGA

Upstream 100 bases:

>100_bases
GGCTACGACCTTTTCCTGATCAGCGGCACCAGCGGCCATTGCCTGGCCTTGACCAATGACGCGACCAACGCCACCGGCAT
TCTTATCGCCGCCAAGGTCG

Downstream 100 bases:

>100_bases
TAACGAGGAAAGCACGATGAAAGAAACCCTGGCCTGGACGGAATACTGCAAATCGCTCGCCCCCGCCATCGTCGAAACCT
GTGCCAAGGTGCAGGTCAGC

Product: leucine-rich repeat-containing protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MTSEKTLADAGIGRLGLCSGCSYFPDYLNSRRCKPGDACIRAHSGRQIDRFLRANPELAANYLGDIFWERRAIATRYAPV
DLIFALKSDTDEVVRRVVAMRLPVDQLISMIHDPDREVRLSVAARLPEAQLIQLINDPDYLIRATIARRLPHGQLAKLIK
DSEREVRKVVASRLPPFALHMLAKDPEPEVRAIVAERALPGLAIALLQDEEWWVRLAAVGNAPLDSLPPLTNDPETEVRD
AALARLAERNTA

Sequences:

>Translated_252_residues
MTSEKTLADAGIGRLGLCSGCSYFPDYLNSRRCKPGDACIRAHSGRQIDRFLRANPELAANYLGDIFWERRAIATRYAPV
DLIFALKSDTDEVVRRVVAMRLPVDQLISMIHDPDREVRLSVAARLPEAQLIQLINDPDYLIRATIARRLPHGQLAKLIK
DSEREVRKVVASRLPPFALHMLAKDPEPEVRAIVAERALPGLAIALLQDEEWWVRLAAVGNAPLDSLPPLTNDPETEVRD
AALARLAERNTA
>Mature_251_residues
TSEKTLADAGIGRLGLCSGCSYFPDYLNSRRCKPGDACIRAHSGRQIDRFLRANPELAANYLGDIFWERRAIATRYAPVD
LIFALKSDTDEVVRRVVAMRLPVDQLISMIHDPDREVRLSVAARLPEAQLIQLINDPDYLIRATIARRLPHGQLAKLIKD
SEREVRKVVASRLPPFALHMLAKDPEPEVRAIVAERALPGLAIALLQDEEWWVRLAAVGNAPLDSLPPLTNDPETEVRDA
ALARLAERNTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR004830
- InterPro:   IPR008665 [H]

Pfam domain/function: PF01816 LRV; PF05484 LRV_FeS [H]

EC number: NA

Molecular weight: Translated: 28112; Mature: 27981

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSEKTLADAGIGRLGLCSGCSYFPDYLNSRRCKPGDACIRAHSGRQIDRFLRANPELAA
CCCCHHHHHCCCCCHHHHCCCHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHCCHHHHH
NYLGDIFWERRAIATRYAPVDLIFALKSDTDEVVRRVVAMRLPVDQLISMIHDPDREVRL
HHHHHHHHHHHHHHHHCCCHHEEEEECCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHH
SVAARLPEAQLIQLINDPDYLIRATIARRLPHGQLAKLIKDSEREVRKVVASRLPPFALH
HHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
MLAKDPEPEVRAIVAERALPGLAIALLQDEEWWVRLAAVGNAPLDSLPPLTNDPETEVRD
HHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHHH
AALARLAERNTA
HHHHHHHHHCCC
>Mature Secondary Structure 
TSEKTLADAGIGRLGLCSGCSYFPDYLNSRRCKPGDACIRAHSGRQIDRFLRANPELAA
CCCHHHHHCCCCCHHHHCCCHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHCCHHHHH
NYLGDIFWERRAIATRYAPVDLIFALKSDTDEVVRRVVAMRLPVDQLISMIHDPDREVRL
HHHHHHHHHHHHHHHHCCCHHEEEEECCCHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHH
SVAARLPEAQLIQLINDPDYLIRATIARRLPHGQLAKLIKDSEREVRKVVASRLPPFALH
HHHHHCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
MLAKDPEPEVRAIVAERALPGLAIALLQDEEWWVRLAAVGNAPLDSLPPLTNDPETEVRD
HHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHHH
AALARLAERNTA
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2836706 [H]