| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
Click here to switch to the map view.
The map label for this gene is 71907007
Identifier: 71907007
GI number: 71907007
Start: 1504059
End: 1504982
Strand: Reverse
Name: 71907007
Synonym: Daro_1375
Alternate gene names: NA
Gene position: 1504982-1504059 (Counterclockwise)
Preceding gene: 71907008
Following gene: 71907006
Centisome position: 33.44
GC content: 54.44
Gene sequence:
>924_bases ATGGCAAAAAGATTCAAAACACGTAATCGCGCAAAGCGTCCACTCGATCTCGCCGGTATCAGGGAAGGCAAATTTGCCGT CGTTGGAGGCATGACGATGGCAGCCTCCGAATTCTCTAGCACCTCTGAAGCATTCCAGGCACGATTCCGCCAAGTAACAA ATGATTTAAGAAAAACGGGCCCCGCCGGGGCAGCGGTAAGCGTGGTCGTGGACTGGCCATGTGAGATCCGCTTCCGTTCT ATCGTCACCGCTTTGCCGCAGGGTGCGTTGGTCGCTGACGGTGAAAATGATGCGTGTTTTTCACCCGATAGCGGCATCGA GAATTCGGCGCTTGCAGAAGCCGAAGAAATCGCCAAGGCCGCTCGACAGATATCCCAGGCCGCAATCGATGTCGGAAATG GCATCGCGTCCGACGCTGAACGGCGCATCATTCCGCTCAACGAGGTCACTCAAATAATGGCCAGCAGCCCTGACGAGGCG GTCTCTCGTTACACTTACGGCCGGGCACGCGGTCAAGAGACTGAGATACATTATCCGGACGGTGAACGAATAATAGGGGG AGACAAACCCATACCGGCCACCGCGCATTCGAAAGAGACTTTCGCCTTGTTGCAATGCAACCTTCGGGAAATCAAGCCGG GGGTCCTTGCTATGACCTCGTCGGTACCCCACGAGGGATGGCGCCAACTTCAAGGGCACACACCAGGAATTGAGTTAATC AAAGGTGAGCCGGACTCCACAGTTCTACGGAGCCTGCTAATGGCCGCAAACGCGCGCATCCCTGTAGACATGACAGTCTG CATCTCCGAAAAAGTCGCAACAGGTGACCGCTGGTGCACGCCAATTTCGATCCAAAATTCGCGCGAGGTCTTTGAGCAAG TACACGAATGGCTTACTTATCTTGAGGAAAACTTGTCTATGTGA
Upstream 100 bases:
>100_bases AACTTCGCGCGCGAAGCGCAGTCGTGCATCCCCTCAGACCGCTTTCTTTCTTAGTACTTGTGCAATGGCATTTCACTATC AATTTTGATCGGAGAACAAA
Downstream 100 bases:
>100_bases AGTGGCCGCATCTACTCAGGAAGGAAATGTTGTCTGCACAAGTATTCGATCAACCCTAAGGAGTTGTATCGCGGGGCTGG TTCCTTCCGTACATTAACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MAKRFKTRNRAKRPLDLAGIREGKFAVVGGMTMAASEFSSTSEAFQARFRQVTNDLRKTGPAGAAVSVVVDWPCEIRFRS IVTALPQGALVADGENDACFSPDSGIENSALAEAEEIAKAARQISQAAIDVGNGIASDAERRIIPLNEVTQIMASSPDEA VSRYTYGRARGQETEIHYPDGERIIGGDKPIPATAHSKETFALLQCNLREIKPGVLAMTSSVPHEGWRQLQGHTPGIELI KGEPDSTVLRSLLMAANARIPVDMTVCISEKVATGDRWCTPISIQNSREVFEQVHEWLTYLEENLSM
Sequences:
>Translated_307_residues MAKRFKTRNRAKRPLDLAGIREGKFAVVGGMTMAASEFSSTSEAFQARFRQVTNDLRKTGPAGAAVSVVVDWPCEIRFRS IVTALPQGALVADGENDACFSPDSGIENSALAEAEEIAKAARQISQAAIDVGNGIASDAERRIIPLNEVTQIMASSPDEA VSRYTYGRARGQETEIHYPDGERIIGGDKPIPATAHSKETFALLQCNLREIKPGVLAMTSSVPHEGWRQLQGHTPGIELI KGEPDSTVLRSLLMAANARIPVDMTVCISEKVATGDRWCTPISIQNSREVFEQVHEWLTYLEENLSM >Mature_306_residues AKRFKTRNRAKRPLDLAGIREGKFAVVGGMTMAASEFSSTSEAFQARFRQVTNDLRKTGPAGAAVSVVVDWPCEIRFRSI VTALPQGALVADGENDACFSPDSGIENSALAEAEEIAKAARQISQAAIDVGNGIASDAERRIIPLNEVTQIMASSPDEAV SRYTYGRARGQETEIHYPDGERIIGGDKPIPATAHSKETFALLQCNLREIKPGVLAMTSSVPHEGWRQLQGHTPGIELIK GEPDSTVLRSLLMAANARIPVDMTVCISEKVATGDRWCTPISIQNSREVFEQVHEWLTYLEENLSM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33453; Mature: 33322
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRFKTRNRAKRPLDLAGIREGKFAVVGGMTMAASEFSSTSEAFQARFRQVTNDLRKTG CCCCCCCHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PAGAAVSVVVDWPCEIRFRSIVTALPQGALVADGENDACFSPDSGIENSALAEAEEIAKA CCCCEEEEEEECCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH ARQISQAAIDVGNGIASDAERRIIPLNEVTQIMASSPDEAVSRYTYGRARGQETEIHYPD HHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEECCC GERIIGGDKPIPATAHSKETFALLQCNLREIKPGVLAMTSSVPHEGWRQLQGHTPGIELI CCEECCCCCCCCCCCCCCCHHHHEECCHHHCCCCCEEEECCCCHHHHHHHCCCCCCEEEE KGEPDSTVLRSLLMAANARIPVDMTVCISEKVATGDRWCTPISIQNSREVFEQVHEWLTY ECCCCHHHHHHHHHHHCCCCCEEEEEEECCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH LEENLSM HHHHCCC >Mature Secondary Structure AKRFKTRNRAKRPLDLAGIREGKFAVVGGMTMAASEFSSTSEAFQARFRQVTNDLRKTG CCCCCCHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PAGAAVSVVVDWPCEIRFRSIVTALPQGALVADGENDACFSPDSGIENSALAEAEEIAKA CCCCEEEEEEECCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH ARQISQAAIDVGNGIASDAERRIIPLNEVTQIMASSPDEAVSRYTYGRARGQETEIHYPD HHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEECCC GERIIGGDKPIPATAHSKETFALLQCNLREIKPGVLAMTSSVPHEGWRQLQGHTPGIELI CCEECCCCCCCCCCCCCCCHHHHEECCHHHCCCCCEEEECCCCHHHHHHHCCCCCCEEEE KGEPDSTVLRSLLMAANARIPVDMTVCISEKVATGDRWCTPISIQNSREVFEQVHEWLTY ECCCCHHHHHHHHHHHCCCCCEEEEEEECCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH LEENLSM HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA