Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is 71907005

Identifier: 71907005

GI number: 71907005

Start: 1498653

End: 1499333

Strand: Reverse

Name: 71907005

Synonym: Daro_1373

Alternate gene names: NA

Gene position: 1499333-1498653 (Counterclockwise)

Preceding gene: 71907006

Following gene: 71907003

Centisome position: 33.31

GC content: 50.37

Gene sequence:

>681_bases
ATGTCCCAAGAGGCATTTAGGCGCAATAACCACTTTGTCCCGCGCATGCATTTAGCTCGCTGGGCAACTGACGGCAAGCG
CGTATGGGTATACCAGCTCCTGGTGTCACATGACAACGTACCGCTATGGGATCACAAGTCCATCTCTAGTACCGCTTCTG
TAGATTATCTGTACGCACAAACGATGTTGGGCGTACTTGACGATGAAATGGAAAAATGGCTGTGCGACGAATTCGAGACA
CCGGCAAAGAATGCCATCAACAAGGTCATCAATCGACAGCCTCTTACCCCCTCCGATTGGGAGCATCTTGCCTATTTCTT
AGCAGCTCAGGACGTCAGGACACCGGCACGGCTTCAGGAAGCGCTAACGCGCCACGAAGAGCAGCTACCAGAAATTGTTG
ATTCGACGCTCGAAAGGCTCGTTCTAAACCTGCAGAACAAAACGCTACCAAAAGAGCCGGAGAACAACCCTCCCGGCCGA
CCCGCAATTCCGTTCCCAATGCGAATCATTAAGGAGGTAGACGAAGGTGCCGACATGGCACGGATAGGTGTAGAGGTTGT
ATCTGGAAGAGCTCTTTGGCTCTTTAGTATTCGGCACCTTCTTAACTCTACTACAAGGGCTTCCCCATTCTTTGCAAGCG
TTCTGAAGTTTTATCGTTTCATTCCTGATCCTGTTTTCTGA

Upstream 100 bases:

>100_bases
AGCGTGGATGCGAAAACGGCATCAAAGAGCAAGAACGACAAGAAACACGGCAGGACACGCGTGAAAACTCGTGAAGCAAA
CTACGGATAAGGGGATATGA

Downstream 100 bases:

>100_bases
CTGTTGATCGAACCCTGTCGTGTCGGTGCGAGAAGGTGAAGGACTGCGGTACTACAACCGGTCATCTTGGGCTTTTGCCC
GGACCCTGATGAAAGACGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MSQEAFRRNNHFVPRMHLARWATDGKRVWVYQLLVSHDNVPLWDHKSISSTASVDYLYAQTMLGVLDDEMEKWLCDEFET
PAKNAINKVINRQPLTPSDWEHLAYFLAAQDVRTPARLQEALTRHEEQLPEIVDSTLERLVLNLQNKTLPKEPENNPPGR
PAIPFPMRIIKEVDEGADMARIGVEVVSGRALWLFSIRHLLNSTTRASPFFASVLKFYRFIPDPVF

Sequences:

>Translated_226_residues
MSQEAFRRNNHFVPRMHLARWATDGKRVWVYQLLVSHDNVPLWDHKSISSTASVDYLYAQTMLGVLDDEMEKWLCDEFET
PAKNAINKVINRQPLTPSDWEHLAYFLAAQDVRTPARLQEALTRHEEQLPEIVDSTLERLVLNLQNKTLPKEPENNPPGR
PAIPFPMRIIKEVDEGADMARIGVEVVSGRALWLFSIRHLLNSTTRASPFFASVLKFYRFIPDPVF
>Mature_225_residues
SQEAFRRNNHFVPRMHLARWATDGKRVWVYQLLVSHDNVPLWDHKSISSTASVDYLYAQTMLGVLDDEMEKWLCDEFETP
AKNAINKVINRQPLTPSDWEHLAYFLAAQDVRTPARLQEALTRHEEQLPEIVDSTLERLVLNLQNKTLPKEPENNPPGRP
AIPFPMRIIKEVDEGADMARIGVEVVSGRALWLFSIRHLLNSTTRASPFFASVLKFYRFIPDPVF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26121; Mature: 25990

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQEAFRRNNHFVPRMHLARWATDGKRVWVYQLLVSHDNVPLWDHKSISSTASVDYLYAQ
CCCHHHHHCCCCCHHHHHHHHCCCCCEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
TMLGVLDDEMEKWLCDEFETPAKNAINKVINRQPLTPSDWEHLAYFLAAQDVRTPARLQE
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH
ALTRHEEQLPEIVDSTLERLVLNLQNKTLPKEPENNPPGRPAIPFPMRIIKEVDEGADMA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHH
RIGVEVVSGRALWLFSIRHLLNSTTRASPFFASVLKFYRFIPDPVF
HHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SQEAFRRNNHFVPRMHLARWATDGKRVWVYQLLVSHDNVPLWDHKSISSTASVDYLYAQ
CCHHHHHCCCCCHHHHHHHHCCCCCEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
TMLGVLDDEMEKWLCDEFETPAKNAINKVINRQPLTPSDWEHLAYFLAAQDVRTPARLQE
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH
ALTRHEEQLPEIVDSTLERLVLNLQNKTLPKEPENNPPGRPAIPFPMRIIKEVDEGADMA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHH
RIGVEVVSGRALWLFSIRHLLNSTTRASPFFASVLKFYRFIPDPVF
HHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA