| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71907005
Identifier: 71907005
GI number: 71907005
Start: 1498653
End: 1499333
Strand: Reverse
Name: 71907005
Synonym: Daro_1373
Alternate gene names: NA
Gene position: 1499333-1498653 (Counterclockwise)
Preceding gene: 71907006
Following gene: 71907003
Centisome position: 33.31
GC content: 50.37
Gene sequence:
>681_bases ATGTCCCAAGAGGCATTTAGGCGCAATAACCACTTTGTCCCGCGCATGCATTTAGCTCGCTGGGCAACTGACGGCAAGCG CGTATGGGTATACCAGCTCCTGGTGTCACATGACAACGTACCGCTATGGGATCACAAGTCCATCTCTAGTACCGCTTCTG TAGATTATCTGTACGCACAAACGATGTTGGGCGTACTTGACGATGAAATGGAAAAATGGCTGTGCGACGAATTCGAGACA CCGGCAAAGAATGCCATCAACAAGGTCATCAATCGACAGCCTCTTACCCCCTCCGATTGGGAGCATCTTGCCTATTTCTT AGCAGCTCAGGACGTCAGGACACCGGCACGGCTTCAGGAAGCGCTAACGCGCCACGAAGAGCAGCTACCAGAAATTGTTG ATTCGACGCTCGAAAGGCTCGTTCTAAACCTGCAGAACAAAACGCTACCAAAAGAGCCGGAGAACAACCCTCCCGGCCGA CCCGCAATTCCGTTCCCAATGCGAATCATTAAGGAGGTAGACGAAGGTGCCGACATGGCACGGATAGGTGTAGAGGTTGT ATCTGGAAGAGCTCTTTGGCTCTTTAGTATTCGGCACCTTCTTAACTCTACTACAAGGGCTTCCCCATTCTTTGCAAGCG TTCTGAAGTTTTATCGTTTCATTCCTGATCCTGTTTTCTGA
Upstream 100 bases:
>100_bases AGCGTGGATGCGAAAACGGCATCAAAGAGCAAGAACGACAAGAAACACGGCAGGACACGCGTGAAAACTCGTGAAGCAAA CTACGGATAAGGGGATATGA
Downstream 100 bases:
>100_bases CTGTTGATCGAACCCTGTCGTGTCGGTGCGAGAAGGTGAAGGACTGCGGTACTACAACCGGTCATCTTGGGCTTTTGCCC GGACCCTGATGAAAGACGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MSQEAFRRNNHFVPRMHLARWATDGKRVWVYQLLVSHDNVPLWDHKSISSTASVDYLYAQTMLGVLDDEMEKWLCDEFET PAKNAINKVINRQPLTPSDWEHLAYFLAAQDVRTPARLQEALTRHEEQLPEIVDSTLERLVLNLQNKTLPKEPENNPPGR PAIPFPMRIIKEVDEGADMARIGVEVVSGRALWLFSIRHLLNSTTRASPFFASVLKFYRFIPDPVF
Sequences:
>Translated_226_residues MSQEAFRRNNHFVPRMHLARWATDGKRVWVYQLLVSHDNVPLWDHKSISSTASVDYLYAQTMLGVLDDEMEKWLCDEFET PAKNAINKVINRQPLTPSDWEHLAYFLAAQDVRTPARLQEALTRHEEQLPEIVDSTLERLVLNLQNKTLPKEPENNPPGR PAIPFPMRIIKEVDEGADMARIGVEVVSGRALWLFSIRHLLNSTTRASPFFASVLKFYRFIPDPVF >Mature_225_residues SQEAFRRNNHFVPRMHLARWATDGKRVWVYQLLVSHDNVPLWDHKSISSTASVDYLYAQTMLGVLDDEMEKWLCDEFETP AKNAINKVINRQPLTPSDWEHLAYFLAAQDVRTPARLQEALTRHEEQLPEIVDSTLERLVLNLQNKTLPKEPENNPPGRP AIPFPMRIIKEVDEGADMARIGVEVVSGRALWLFSIRHLLNSTTRASPFFASVLKFYRFIPDPVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26121; Mature: 25990
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQEAFRRNNHFVPRMHLARWATDGKRVWVYQLLVSHDNVPLWDHKSISSTASVDYLYAQ CCCHHHHHCCCCCHHHHHHHHCCCCCEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH TMLGVLDDEMEKWLCDEFETPAKNAINKVINRQPLTPSDWEHLAYFLAAQDVRTPARLQE HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH ALTRHEEQLPEIVDSTLERLVLNLQNKTLPKEPENNPPGRPAIPFPMRIIKEVDEGADMA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHH RIGVEVVSGRALWLFSIRHLLNSTTRASPFFASVLKFYRFIPDPVF HHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SQEAFRRNNHFVPRMHLARWATDGKRVWVYQLLVSHDNVPLWDHKSISSTASVDYLYAQ CCHHHHHCCCCCHHHHHHHHCCCCCEEHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH TMLGVLDDEMEKWLCDEFETPAKNAINKVINRQPLTPSDWEHLAYFLAAQDVRTPARLQE HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH ALTRHEEQLPEIVDSTLERLVLNLQNKTLPKEPENNPPGRPAIPFPMRIIKEVDEGADMA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHH RIGVEVVSGRALWLFSIRHLLNSTTRASPFFASVLKFYRFIPDPVF HHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA