| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is mtaD [H]
Identifier: 71906868
GI number: 71906868
Start: 1333443
End: 1334777
Strand: Reverse
Name: mtaD [H]
Synonym: Daro_1229
Alternate gene names: 71906868
Gene position: 1334777-1333443 (Counterclockwise)
Preceding gene: 71906927
Following gene: 71906867
Centisome position: 29.65
GC content: 57.23
Gene sequence:
>1335_bases ATGACAACAACACCTGAAGTTATCGACCTTCTGATCGAAGCACGCTGGATTGCTGCGGTCGACCCCGACGTGGTACACAA AAACCACGCCGTCGCCGTCAACCAAGGTCGCATTCTGGCCATCCTGCCCGCCGGCGAAGCCCGTGCCCTGTATGCGCCGA AGAAGACCACGGTACTTCAGGACCACATCCTGATTCCCGGCCTGATCAACCTGCACACCCACGCCGCGATGAGCCTGATG CGTGGCCTGGCCGACGACCTGCCATTGATGGAGTGGCTACAGAAACATATCTGGCCGACAGAAGCCGCCCATCTCTCGTC GCAGTTCGTCTACGACGGCACCCGCCTCGCCTGCGCTGAAATGCTCAAAGGCGGGATTACCTGCTTCAACGACATGTACT TTTTCCCGGAAGCTGCTGCGACGGCCGCATCCGAATTCGGCATGCGTGCAATGCTCGGCATCACCACGCTGGAGTTCCCA ACCCCCTATGCCAGTGATGCCACCGATTACATCAACAAGGGACTGGCCGTCCGCGAAGCGTGGCACAACAATCCACTGAT TGACTTCTGCCTGGCACCCCACGCCCCTTACACCGTGTCTGACAGCACTTTTGAACGGATTCTGACGCTCTCCGAGCAAC TGAATCTGCCGGTGCACTGCCACATTCACGAAACACAGCAGGAAATTGACGAAAATCTTAAGCAGCACAAACTGCGACCG CTGGCCCGCCTGCACAAACTCGGACTACTCGGCCCCAATTTCATCGGGGTCCACGCCGTCCACCTGAACGACGACGACCT GCAACTACTCGCCGATACCGGCTGCAATATCGCCCACTGCCCCACCTCTAACCTCAAACTGGCCAGCGGCTTTGCTCCAG TAGCGAAAATGAGACAATTTAGCATCAATGTCGGGCTAGGTACCGACGGCGCGGCAAGCAACAACCGCCTCGACCTGTTT GGCGAAATGCGCCTGGCCTCCCTATTAGCCAAAGGACTAACCGGTGATGCCAGCGCCCTGCCAGCCAGAGAAATCCTGCG CATGGCCACACTCTATGCCGCCCAAGCACTGGGACTCGGCAATGAAGTCGGCTCGATCACCCCGGGAAAATCAGCAGACC TTTGTGCCGTCAGCCTGGCGGCATTGGAAACACGCCCCTGTTTCGACCCAGTGTCACACCTGATCAATGTCTCAGGCCGA GAATCAGTTACTCACGTCTGGGTCGCCGGAAAGTGTTGCGTAGACGACAAATCTTTACTTCAGCACGACCAAAATGATTT GGAATCTGCGATAGCACTATGGCAGAATAGTTTGGAATTCCGCCAGCGGACCTGA
Upstream 100 bases:
>100_bases ATGTCTCACATTCGCACCGCTTGCGCGATGCCTTATTAGTTGATTCAAGCGTAATTTGCTATTTTAACACGCGACCTTCA CCGGATAGACCCCGTTTTTC
Downstream 100 bases:
>100_bases TCTATGGTCGTGGAGCGGGTTAAAGATTTCCAAATTTTCTTCAATGAGGGAAAACAATGATCAAAAATATCGTCAAGAAA TCTCTGGTTCTGGCCCTGCT
Product: N-ethylammeline chlorohydrolase
Products: NA
Alternate protein names: MTA/SAH deaminase [H]
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MTTTPEVIDLLIEARWIAAVDPDVVHKNHAVAVNQGRILAILPAGEARALYAPKKTTVLQDHILIPGLINLHTHAAMSLM RGLADDLPLMEWLQKHIWPTEAAHLSSQFVYDGTRLACAEMLKGGITCFNDMYFFPEAAATAASEFGMRAMLGITTLEFP TPYASDATDYINKGLAVREAWHNNPLIDFCLAPHAPYTVSDSTFERILTLSEQLNLPVHCHIHETQQEIDENLKQHKLRP LARLHKLGLLGPNFIGVHAVHLNDDDLQLLADTGCNIAHCPTSNLKLASGFAPVAKMRQFSINVGLGTDGAASNNRLDLF GEMRLASLLAKGLTGDASALPAREILRMATLYAAQALGLGNEVGSITPGKSADLCAVSLAALETRPCFDPVSHLINVSGR ESVTHVWVAGKCCVDDKSLLQHDQNDLESAIALWQNSLEFRQRT
Sequences:
>Translated_444_residues MTTTPEVIDLLIEARWIAAVDPDVVHKNHAVAVNQGRILAILPAGEARALYAPKKTTVLQDHILIPGLINLHTHAAMSLM RGLADDLPLMEWLQKHIWPTEAAHLSSQFVYDGTRLACAEMLKGGITCFNDMYFFPEAAATAASEFGMRAMLGITTLEFP TPYASDATDYINKGLAVREAWHNNPLIDFCLAPHAPYTVSDSTFERILTLSEQLNLPVHCHIHETQQEIDENLKQHKLRP LARLHKLGLLGPNFIGVHAVHLNDDDLQLLADTGCNIAHCPTSNLKLASGFAPVAKMRQFSINVGLGTDGAASNNRLDLF GEMRLASLLAKGLTGDASALPAREILRMATLYAAQALGLGNEVGSITPGKSADLCAVSLAALETRPCFDPVSHLINVSGR ESVTHVWVAGKCCVDDKSLLQHDQNDLESAIALWQNSLEFRQRT >Mature_443_residues TTTPEVIDLLIEARWIAAVDPDVVHKNHAVAVNQGRILAILPAGEARALYAPKKTTVLQDHILIPGLINLHTHAAMSLMR GLADDLPLMEWLQKHIWPTEAAHLSSQFVYDGTRLACAEMLKGGITCFNDMYFFPEAAATAASEFGMRAMLGITTLEFPT PYASDATDYINKGLAVREAWHNNPLIDFCLAPHAPYTVSDSTFERILTLSEQLNLPVHCHIHETQQEIDENLKQHKLRPL ARLHKLGLLGPNFIGVHAVHLNDDDLQLLADTGCNIAHCPTSNLKLASGFAPVAKMRQFSINVGLGTDGAASNNRLDLFG EMRLASLLAKGLTGDASALPAREILRMATLYAAQALGLGNEVGSITPGKSADLCAVSLAALETRPCFDPVSHLINVSGRE SVTHVWVAGKCCVDDKSLLQHDQNDLESAIALWQNSLEFRQRT
Specific function: Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MTA/SAH deaminase family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=372, Percent_Identity=26.8817204301075, Blast_Score=127, Evalue=2e-29, Organism=Escherichia coli, GI1789249, Length=330, Percent_Identity=30, Blast_Score=128, Evalue=6e-31, Organism=Escherichia coli, GI87082177, Length=420, Percent_Identity=22.1428571428571, Blast_Score=70, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17540282, Length=393, Percent_Identity=24.1730279898219, Blast_Score=96, Evalue=5e-20, Organism=Saccharomyces cerevisiae, GI6319963, Length=333, Percent_Identity=24.6246246246246, Blast_Score=97, Evalue=5e-21, Organism=Drosophila melanogaster, GI24643849, Length=383, Percent_Identity=28.4595300261097, Blast_Score=132, Evalue=4e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.28 [H]
Molecular weight: Translated: 48403; Mature: 48272
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTPEVIDLLIEARWIAAVDPDVVHKNHAVAVNQGRILAILPAGEARALYAPKKTTVLQ CCCCHHHHHHHHHHHHEEECCHHHHCCCCEEEECCCEEEEEEECCCCCEEECCCCCCEEC DHILIPGLINLHTHAAMSLMRGLADDLPLMEWLQKHIWPTEAAHLSSQFVYDGTRLACAE CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHCCHHEECCHHHHHHH MLKGGITCFNDMYFFPEAAATAASEFGMRAMLGITTLEFPTPYASDATDYINKGLAVREA HHHCCCEEECCCEECCCHHHHHHHHHCCHHHHCEEEEECCCCCCCCHHHHHHCCCEEHHH WHNNPLIDFCLAPHAPYTVSDSTFERILTLSEQLNLPVHCHIHETQQEIDENLKQHKLRP HCCCCEEEEEECCCCCCEECHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHH LARLHKLGLLGPNFIGVHAVHLNDDDLQLLADTGCNIAHCPTSNLKLASGFAPVAKMRQF HHHHHHHCCCCCCCEEEEEEEECCCCHHEEECCCCCEEECCCCCCEECCCCHHHHHHHHE SINVGLGTDGAASNNRLDLFGEMRLASLLAKGLTGDASALPAREILRMATLYAAQALGLG EEEEECCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC NEVGSITPGKSADLCAVSLAALETRPCFDPVSHLINVSGRESVTHVWVAGKCCVDDKSLL CCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEEECEEECCCHHHH QHDQNDLESAIALWQNSLEFRQRT HCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTTPEVIDLLIEARWIAAVDPDVVHKNHAVAVNQGRILAILPAGEARALYAPKKTTVLQ CCCHHHHHHHHHHHHEEECCHHHHCCCCEEEECCCEEEEEEECCCCCEEECCCCCCEEC DHILIPGLINLHTHAAMSLMRGLADDLPLMEWLQKHIWPTEAAHLSSQFVYDGTRLACAE CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHCCHHEECCHHHHHHH MLKGGITCFNDMYFFPEAAATAASEFGMRAMLGITTLEFPTPYASDATDYINKGLAVREA HHHCCCEEECCCEECCCHHHHHHHHHCCHHHHCEEEEECCCCCCCCHHHHHHCCCEEHHH WHNNPLIDFCLAPHAPYTVSDSTFERILTLSEQLNLPVHCHIHETQQEIDENLKQHKLRP HCCCCEEEEEECCCCCCEECHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHH LARLHKLGLLGPNFIGVHAVHLNDDDLQLLADTGCNIAHCPTSNLKLASGFAPVAKMRQF HHHHHHHCCCCCCCEEEEEEEECCCCHHEEECCCCCEEECCCCCCEECCCCHHHHHHHHE SINVGLGTDGAASNNRLDLFGEMRLASLLAKGLTGDASALPAREILRMATLYAAQALGLG EEEEECCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC NEVGSITPGKSADLCAVSLAALETRPCFDPVSHLINVSGRESVTHVWVAGKCCVDDKSLL CCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEEEEEECEEECCCHHHH QHDQNDLESAIALWQNSLEFRQRT HCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA