| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is ate
Identifier: 71906834
GI number: 71906834
Start: 1299163
End: 1299906
Strand: Reverse
Name: ate
Synonym: Daro_1195
Alternate gene names: 71906834
Gene position: 1299906-1299163 (Counterclockwise)
Preceding gene: 71906835
Following gene: 71906833
Centisome position: 28.88
GC content: 59.41
Gene sequence:
>744_bases ATGGCCCAACCCGACGACGCCGCCCTCCCCTTTTCGCTGCTGCAGTTCTACGCCACTTCGCCCTATCCGTGCAGCTATCT GCCCGACCGCGAGGCCCGTTCGCAAGTGGCAACCCCGGCTCACCTGATCGACAGCGAAATCTACAGTTCGCTGATCCGTA CTGGTTTTCGGCGCAGCGGCATCTTTACCTATCGCCCTCACTGTGACGGCTGCAAGGCCTGCGTTCCGGTTCGCCTGCCG GTGACCGAGTTGCGCCCCAATCGCAGCCAGCGCCGCGCCATGAAGCACCATGCCAAGCTGCGCGTCCGCGAATTGCCCTT GGTCTATATCGACGAGCATTACGCGCTGTACAACCGCTACCAGCAAGCTCGGCATCCCGGTGGCGGCATGGACGAAGACA GTCATGAGCAATATGCCCAGTTCCTGCTGCAAAGTCGTGTAGACACCCGGCTGATCGAGTTCTCCGACGATGAAGGCATC CGTATGGTCAGCCTGATCGATGTCCTCGACGACGGTCTCTCCTCGGTCTATACCTTCTACGACCCGGACATTCCAGACGC CAGCTTTGGCACCTACAACATCCTGTGGCAAGCTGCCCAATGTCAGGCCCTCGGCCTGCCCTACCTTTACCTCGGCTACT GGATCGCCAATAGTCGCAAGATGGCCTACAAGGCGATGTTTCAGCCCATTGAAGGCCTGATCGATGGCCACTGGCTCGCG CTACCCAAACTCGAAAAAACATGA
Upstream 100 bases:
>100_bases TTCCGCGAGATGCGTTTCAGGCCCGCTTGTCAGCCTTGACCGCATCCGGCAGTCCACGCACAGTCTGGTCGACCGACCCG CTTGACCCGGCGAGATAGAC
Downstream 100 bases:
>100_bases AACTCAGTTACCTCTTGGCACTACTCCTCCCGCTGTGCGCAATAGCCAGCGAAGAACGCACTCCCTACGCCTGCGACAAC GGCAGCCGCCTCGACATTTC
Product: arginyl-tRNA-protein transferase
Products: NA
Alternate protein names: Arginyltransferase; R-transferase
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MAQPDDAALPFSLLQFYATSPYPCSYLPDREARSQVATPAHLIDSEIYSSLIRTGFRRSGIFTYRPHCDGCKACVPVRLP VTELRPNRSQRRAMKHHAKLRVRELPLVYIDEHYALYNRYQQARHPGGGMDEDSHEQYAQFLLQSRVDTRLIEFSDDEGI RMVSLIDVLDDGLSSVYTFYDPDIPDASFGTYNILWQAAQCQALGLPYLYLGYWIANSRKMAYKAMFQPIEGLIDGHWLA LPKLEKT
Sequences:
>Translated_247_residues MAQPDDAALPFSLLQFYATSPYPCSYLPDREARSQVATPAHLIDSEIYSSLIRTGFRRSGIFTYRPHCDGCKACVPVRLP VTELRPNRSQRRAMKHHAKLRVRELPLVYIDEHYALYNRYQQARHPGGGMDEDSHEQYAQFLLQSRVDTRLIEFSDDEGI RMVSLIDVLDDGLSSVYTFYDPDIPDASFGTYNILWQAAQCQALGLPYLYLGYWIANSRKMAYKAMFQPIEGLIDGHWLA LPKLEKT >Mature_246_residues AQPDDAALPFSLLQFYATSPYPCSYLPDREARSQVATPAHLIDSEIYSSLIRTGFRRSGIFTYRPHCDGCKACVPVRLPV TELRPNRSQRRAMKHHAKLRVRELPLVYIDEHYALYNRYQQARHPGGGMDEDSHEQYAQFLLQSRVDTRLIEFSDDEGIR MVSLIDVLDDGLSSVYTFYDPDIPDASFGTYNILWQAAQCQALGLPYLYLGYWIANSRKMAYKAMFQPIEGLIDGHWLAL PKLEKT
Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential)
COG id: COG2935
COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the R-transferase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ATE_DECAR (Q47GT0)
Other databases:
- EMBL: CP000089 - RefSeq: YP_284421.1 - STRING: Q47GT0 - GeneID: 3570136 - GenomeReviews: CP000089_GR - KEGG: dar:Daro_1195 - NMPDR: fig|159087.4.peg.825 - eggNOG: COG2935 - HOGENOM: HBG651116 - OMA: PQFYLTA - ProtClustDB: PRK01305 - BioCyc: DARO159087:DARO_1195-MONOMER - GO: GO:0005737 - GO: GO:0006412 - HAMAP: MF_00689 - InterPro: IPR016181 - InterPro: IPR007472 - InterPro: IPR017138 - InterPro: IPR007471 - PIRSF: PIRSF037208
Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.8
Molecular weight: Translated: 28348; Mature: 28216
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQPDDAALPFSLLQFYATSPYPCSYLPDREARSQVATPAHLIDSEIYSSLIRTGFRRSG CCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCHHHCC IFTYRPHCDGCKACVPVRLPVTELRPNRSQRRAMKHHAKLRVRELPLVYIDEHYALYNRY EEEECCCCCCCCCCEEEECCHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHH QQARHPGGGMDEDSHEQYAQFLLQSRVDTRLIEFSDDEGIRMVSLIDVLDDGLSSVYTFY HHHCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHEEEEE DPDIPDASFGTYNILWQAAQCQALGLPYLYLGYWIANSRKMAYKAMFQPIEGLIDGHWLA CCCCCCCCCCHHHHEEEHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEE LPKLEKT CCCCCCC >Mature Secondary Structure AQPDDAALPFSLLQFYATSPYPCSYLPDREARSQVATPAHLIDSEIYSSLIRTGFRRSG CCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCHHHCC IFTYRPHCDGCKACVPVRLPVTELRPNRSQRRAMKHHAKLRVRELPLVYIDEHYALYNRY EEEECCCCCCCCCCEEEECCHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHH QQARHPGGGMDEDSHEQYAQFLLQSRVDTRLIEFSDDEGIRMVSLIDVLDDGLSSVYTFY HHHCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHEEEEE DPDIPDASFGTYNILWQAAQCQALGLPYLYLGYWIANSRKMAYKAMFQPIEGLIDGHWLA CCCCCCCCCCHHHHEEEHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEE LPKLEKT CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA