Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is 71906810

Identifier: 71906810

GI number: 71906810

Start: 1276711

End: 1277481

Strand: Reverse

Name: 71906810

Synonym: Daro_1171

Alternate gene names: NA

Gene position: 1277481-1276711 (Counterclockwise)

Preceding gene: 71906811

Following gene: 71906803

Centisome position: 28.38

GC content: 57.2

Gene sequence:

>771_bases
ATGATGAAAAGGCTACTTGCTGTTTTTGTCTTGGCGCTAGCGCTGGCACCCCTCGCCGTTGCCGAGGCCCAGCCGGATGC
CCAGGCAGCTGGCTGGACGGGCGCCGTGGGCGCCGGGCCGATTGTCTTTCCACACTACAGCGGCGGGAAAGCCACCCAGG
CATGGCTGATTCCCCTCATCTCGGCCGAATACAACGACATCCTGTACATCGAACCGCTTCGTGCCGGCGTCTATTTCTGG
GGAAGCGAAGATCGAAAAATGGGGCTAGGCTTGGCGATAGAACCACGTTTCGGCTACAAGGCCGGAGATGGGGCCAGGCT
GGTCGGAATGAACACGCGAGGCAAAAGTATCGAAGGCGGCCCGGCTTTCGACTGGGATCTGGGCTTTGTCTCACTAAGCG
CTTCGCTATTCACCGACCTGACCAATTCCAGCCGCGGAGAATCAGCGCGACTCTATGCGTATCGTCAAATCGTCAAAAAC
GAAACCTGGAAAATAGGTGCATTCGTCGGTATCGACAGAATGAGCAGTCGTGTCAGCAACTATTTTTTCGGCGTCAATGA
GCTTGAGGCGAGTCCCGATCGGCCTGCATTTCACACAGGCAGCGCAACCAATGCGACCGCCGGGTTCGATGGCCGCTACC
GACTGGACAAGGATTATTCAGTCCTCTTTGGTCTCCAGCAAACGCGACTGGGTCATGAAGTTGCCCATAGTCCGATCGTG
GAAACCCGTCAGGCAACCGTTGCCTGGCTGGGTATCGCCTGGAATCTCTGA

Upstream 100 bases:

>100_bases
CCGACCTGAAAGCGGCCATCAGCAACTCGTTCGCCTTCGGCGGAACGAACGCCGTTCTGGTATTCCGCCGAATAGATTGA
AACACGACGACCGAGCCCTG

Downstream 100 bases:

>100_bases
TCTACGCTACCTGACAAGGCGCCACCTAGTCACGGGTGTTATTGGCGAGAAAGCGATGGATTTGGCGCTTTTTCAATTCC
TCCTCCAGCGCCACCTTCAC

Product: MltA-interacting MipA

Products: NA

Alternate protein names: MltA-Interacting MipA; Outer Membrane Protein

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MMKRLLAVFVLALALAPLAVAEAQPDAQAAGWTGAVGAGPIVFPHYSGGKATQAWLIPLISAEYNDILYIEPLRAGVYFW
GSEDRKMGLGLAIEPRFGYKAGDGARLVGMNTRGKSIEGGPAFDWDLGFVSLSASLFTDLTNSSRGESARLYAYRQIVKN
ETWKIGAFVGIDRMSSRVSNYFFGVNELEASPDRPAFHTGSATNATAGFDGRYRLDKDYSVLFGLQQTRLGHEVAHSPIV
ETRQATVAWLGIAWNL

Sequences:

>Translated_256_residues
MMKRLLAVFVLALALAPLAVAEAQPDAQAAGWTGAVGAGPIVFPHYSGGKATQAWLIPLISAEYNDILYIEPLRAGVYFW
GSEDRKMGLGLAIEPRFGYKAGDGARLVGMNTRGKSIEGGPAFDWDLGFVSLSASLFTDLTNSSRGESARLYAYRQIVKN
ETWKIGAFVGIDRMSSRVSNYFFGVNELEASPDRPAFHTGSATNATAGFDGRYRLDKDYSVLFGLQQTRLGHEVAHSPIV
ETRQATVAWLGIAWNL
>Mature_256_residues
MMKRLLAVFVLALALAPLAVAEAQPDAQAAGWTGAVGAGPIVFPHYSGGKATQAWLIPLISAEYNDILYIEPLRAGVYFW
GSEDRKMGLGLAIEPRFGYKAGDGARLVGMNTRGKSIEGGPAFDWDLGFVSLSASLFTDLTNSSRGESARLYAYRQIVKN
ETWKIGAFVGIDRMSSRVSNYFFGVNELEASPDRPAFHTGSATNATAGFDGRYRLDKDYSVLFGLQQTRLGHEVAHSPIV
ETRQATVAWLGIAWNL

Specific function: Unknown

COG id: COG3713

COG function: function code M; Outer membrane protein V

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27814; Mature: 27814

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKRLLAVFVLALALAPLAVAEAQPDAQAAGWTGAVGAGPIVFPHYSGGKATQAWLIPLI
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEE
SAEYNDILYIEPLRAGVYFWGSEDRKMGLGLAIEPRFGYKAGDGARLVGMNTRGKSIEGG
CCCCCCEEEEEECCCCEEEECCCCCEECCEEEECCCCCCCCCCCCEEEEECCCCCCCCCC
PAFDWDLGFVSLSASLFTDLTNSSRGESARLYAYRQIVKNETWKIGAFVGIDRMSSRVSN
CCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHH
YFFGVNELEASPDRPAFHTGSATNATAGFDGRYRLDKDYSVLFGLQQTRLGHEVAHSPIV
HHCCCHHHCCCCCCCCEECCCCCCCCCCCCCCEEECCCCEEEEEHHHHHHHHHHHCCCCH
ETRQATVAWLGIAWNL
HHCCCEEEEEEEEECC
>Mature Secondary Structure
MMKRLLAVFVLALALAPLAVAEAQPDAQAAGWTGAVGAGPIVFPHYSGGKATQAWLIPLI
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEEE
SAEYNDILYIEPLRAGVYFWGSEDRKMGLGLAIEPRFGYKAGDGARLVGMNTRGKSIEGG
CCCCCCEEEEEECCCCEEEECCCCCEECCEEEECCCCCCCCCCCCEEEEECCCCCCCCCC
PAFDWDLGFVSLSASLFTDLTNSSRGESARLYAYRQIVKNETWKIGAFVGIDRMSSRVSN
CCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHH
YFFGVNELEASPDRPAFHTGSATNATAGFDGRYRLDKDYSVLFGLQQTRLGHEVAHSPIV
HHCCCHHHCCCCCCCCEECCCCCCCCCCCCCCEEECCCCEEEEEHHHHHHHHHHHCCCCH
ETRQATVAWLGIAWNL
HHCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA