| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906772
Identifier: 71906772
GI number: 71906772
Start: 1239340
End: 1240212
Strand: Reverse
Name: 71906772
Synonym: Daro_1133
Alternate gene names: NA
Gene position: 1240212-1239340 (Counterclockwise)
Preceding gene: 71906773
Following gene: 71906771
Centisome position: 27.55
GC content: 61.86
Gene sequence:
>873_bases ATGCATCCAAGCCTGATCAGATTGCTGCCAATTGCCTTTTTGCTGCTACTCGGCGGCTGTATGTCGCCGGGCATTCCTCA AGCCAGCGGTAGCGGCGAACAGCCGGTGGCTCGGGCGCTGTTGCAGAAATCAGCTGACGCGCATGGCCTGGCCGCCTTCC GCCAGATCGACGACCTCAGCGTCGGCTATGCCGGTGAGTGGTACGGACTGGTCAGCAAGGTTCAGCCAACGCTGATCGAC GCCGATTTCCGCCAGGGGTCACAGGAACGGATCATTTTCAAGGACGGACCGGTCATCGCCCAGCGCCACCTCGGCCCCAA GGGCAACAAGCAGGTCATCCGCCGAACAGGCGATGTGCAGGTTTTCTACAACGATGTAGCCACCACCGACCGGGAGGTGC TGGCAGCCGCCGCGCTGGTCGCCGACGGCTACCGGATGTTCCTGACCGGGCCATTCTATTTCCTCGACGGTAACCTGAGC CTGGAAGTGGGCGAAGACGAAACCGTTGAAGGCCGCCCGTGCACGACGCTGGTCGCCGTGCGTCGTCCCGGCCACGGCCA GTCAGCGGAAGACCGCTACCAGCTGTTCATCGACACCGAAAACCACCTGCTGCGCCGCGTCCGTTTCACGATGGAGGGCC TGGAATCAACGCAAGGCGCTATCGCCGAGGTCGATTTCTTCGACCACAAGGAAATTGCCGGCGTCACTTGGCCAACCCGT TTTTACGAGCGCCTGCGCAAACCCATCCCGAGCCTGCCGGTACATGACTGGCGACTGATCGGGCTGGATGTGAATCGCGG GCTGAGCGAAGCCGACATTGCGGGGCCTAGCTTCTCAGCCAAAGCTGCTGAAGCCGCTCGACCGATCAAATAA
Upstream 100 bases:
>100_bases TGGTCCGCCATTGTGGGCGGCCGAGGCTTCCGGGGGAATTGGCTGACATGCACGGTCAACCACAACTCAAATCTTCTGCG ACCAAACGGAGTAGCAAAGC
Downstream 100 bases:
>100_bases GAAACGATGAGCCAACTGACCGAACTGCACGCCGATATCGACGCCCGGGTGGCCAGCATCCGGGAAAACAAGGCCGACTG GCTTTGCGGCAAAGGCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MHPSLIRLLPIAFLLLLGGCMSPGIPQASGSGEQPVARALLQKSADAHGLAAFRQIDDLSVGYAGEWYGLVSKVQPTLID ADFRQGSQERIIFKDGPVIAQRHLGPKGNKQVIRRTGDVQVFYNDVATTDREVLAAAALVADGYRMFLTGPFYFLDGNLS LEVGEDETVEGRPCTTLVAVRRPGHGQSAEDRYQLFIDTENHLLRRVRFTMEGLESTQGAIAEVDFFDHKEIAGVTWPTR FYERLRKPIPSLPVHDWRLIGLDVNRGLSEADIAGPSFSAKAAEAARPIK
Sequences:
>Translated_290_residues MHPSLIRLLPIAFLLLLGGCMSPGIPQASGSGEQPVARALLQKSADAHGLAAFRQIDDLSVGYAGEWYGLVSKVQPTLID ADFRQGSQERIIFKDGPVIAQRHLGPKGNKQVIRRTGDVQVFYNDVATTDREVLAAAALVADGYRMFLTGPFYFLDGNLS LEVGEDETVEGRPCTTLVAVRRPGHGQSAEDRYQLFIDTENHLLRRVRFTMEGLESTQGAIAEVDFFDHKEIAGVTWPTR FYERLRKPIPSLPVHDWRLIGLDVNRGLSEADIAGPSFSAKAAEAARPIK >Mature_290_residues MHPSLIRLLPIAFLLLLGGCMSPGIPQASGSGEQPVARALLQKSADAHGLAAFRQIDDLSVGYAGEWYGLVSKVQPTLID ADFRQGSQERIIFKDGPVIAQRHLGPKGNKQVIRRTGDVQVFYNDVATTDREVLAAAALVADGYRMFLTGPFYFLDGNLS LEVGEDETVEGRPCTTLVAVRRPGHGQSAEDRYQLFIDTENHLLRRVRFTMEGLESTQGAIAEVDFFDHKEIAGVTWPTR FYERLRKPIPSLPVHDWRLIGLDVNRGLSEADIAGPSFSAKAAEAARPIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31896; Mature: 31896
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPSLIRLLPIAFLLLLGGCMSPGIPQASGSGEQPVARALLQKSADAHGLAAFRQIDDLS CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCC VGYAGEWYGLVSKVQPTLIDADFRQGSQERIIFKDGPVIAQRHLGPKGNKQVIRRTGDVQ CCCCCHHHHHHHHCCCCEEECHHHCCCCCEEEEECCCEEEHHCCCCCCCHHHHHCCCCEE VFYNDVATTDREVLAAAALVADGYRMFLTGPFYFLDGNLSLEVGEDETVEGRPCTTLVAV EEECCCCCCHHHHHHHHHHHHCCEEEEEECCEEEECCCEEEEECCCCCCCCCCCEEEEEE RRPGHGQSAEDRYQLFIDTENHLLRRVRFTMEGLESTQGAIAEVDFFDHKEIAGVTWPTR ECCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHCCCCCHHH FYERLRKPIPSLPVHDWRLIGLDVNRGLSEADIAGPSFSAKAAEAARPIK HHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHCCCCCCCCHHHHHCCCCC >Mature Secondary Structure MHPSLIRLLPIAFLLLLGGCMSPGIPQASGSGEQPVARALLQKSADAHGLAAFRQIDDLS CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCC VGYAGEWYGLVSKVQPTLIDADFRQGSQERIIFKDGPVIAQRHLGPKGNKQVIRRTGDVQ CCCCCHHHHHHHHCCCCEEECHHHCCCCCEEEEECCCEEEHHCCCCCCCHHHHHCCCCEE VFYNDVATTDREVLAAAALVADGYRMFLTGPFYFLDGNLSLEVGEDETVEGRPCTTLVAV EEECCCCCCHHHHHHHHHHHHCCEEEEEECCEEEECCCEEEEECCCCCCCCCCCEEEEEE RRPGHGQSAEDRYQLFIDTENHLLRRVRFTMEGLESTQGAIAEVDFFDHKEIAGVTWPTR ECCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHCCCCCHHH FYERLRKPIPSLPVHDWRLIGLDVNRGLSEADIAGPSFSAKAAEAARPIK HHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHCCCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA