Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

Click here to switch to the map view.

The map label for this gene is 71906771

Identifier: 71906771

GI number: 71906771

Start: 1238788

End: 1239333

Strand: Reverse

Name: 71906771

Synonym: Daro_1132

Alternate gene names: NA

Gene position: 1239333-1238788 (Counterclockwise)

Preceding gene: 71906772

Following gene: 71906770

Centisome position: 27.53

GC content: 65.2

Gene sequence:

>546_bases
ATGAGCCAACTGACCGAACTGCACGCCGATATCGACGCCCGGGTGGCCAGCATCCGGGAAAACAAGGCCGACTGGCTTTG
CGGCAAAGGCTGCGATAGCTGCTGCAAACGACTGGCCGAGGTGCCGCGACTGACCGCGGCCGAATGGGACCTGCTGCGCG
AAGGCCTGGCCGGGTTGGCCCCGGATCACCTGCAAGCGATCAGCCGTGAGATCACCGCCGTGGCCAATTCAACAGCCCGC
CCCGTCATCTGCCCGCTGCTCGACCGCAGTAGCGGTGCCTGCCCGGTCTATCTGCACCGCCCGGTCGCCTGCCGCACCTA
TGGTTTTTACATGCAGCGCGACCTTGGGCTGTTTTGCCGCGACATCGAAAAAGAGGTGGCTGCTGGCGCCCTGCCGGACG
TGGTCTGGGGCAATCACGATGCCATCGACCGCCGGCTGGCCGGTCTGGGCGAAAGCCGGGCGCTGACGGAGTGGTTTGCA
GACTGGCAAGCAACCGGCGACGCCGCCGGGCAAGCGACGACGTTTGTGTTTAACGACGGGAAGTAA

Upstream 100 bases:

>100_bases
CGGGCTGGATGTGAATCGCGGGCTGAGCGAAGCCGACATTGCGGGGCCTAGCTTCTCAGCCAAAGCTGCTGAAGCCGCTC
GACCGATCAAATAAGAAACG

Downstream 100 bases:

>100_bases
CCGGAGATTCCATCATGAACATGTTCAAGCGCTTGCCAGGCTTTACCCGCACACCGGACGGGAAGGAACGGCTTGTTCTC
CGAATGATTCCCAAGGTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MSQLTELHADIDARVASIRENKADWLCGKGCDSCCKRLAEVPRLTAAEWDLLREGLAGLAPDHLQAISREITAVANSTAR
PVICPLLDRSSGACPVYLHRPVACRTYGFYMQRDLGLFCRDIEKEVAAGALPDVVWGNHDAIDRRLAGLGESRALTEWFA
DWQATGDAAGQATTFVFNDGK

Sequences:

>Translated_181_residues
MSQLTELHADIDARVASIRENKADWLCGKGCDSCCKRLAEVPRLTAAEWDLLREGLAGLAPDHLQAISREITAVANSTAR
PVICPLLDRSSGACPVYLHRPVACRTYGFYMQRDLGLFCRDIEKEVAAGALPDVVWGNHDAIDRRLAGLGESRALTEWFA
DWQATGDAAGQATTFVFNDGK
>Mature_180_residues
SQLTELHADIDARVASIRENKADWLCGKGCDSCCKRLAEVPRLTAAEWDLLREGLAGLAPDHLQAISREITAVANSTARP
VICPLLDRSSGACPVYLHRPVACRTYGFYMQRDLGLFCRDIEKEVAAGALPDVVWGNHDAIDRRLAGLGESRALTEWFAD
WQATGDAAGQATTFVFNDGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19776; Mature: 19644

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLTELHADIDARVASIRENKADWLCGKGCDSCCKRLAEVPRLTAAEWDLLREGLAGLA
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
PDHLQAISREITAVANSTARPVICPLLDRSSGACPVYLHRPVACRTYGFYMQRDLGLFCR
HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
DIEKEVAAGALPDVVWGNHDAIDRRLAGLGESRALTEWFADWQATGDAAGQATTFVFNDG
HHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECC
K
C
>Mature Secondary Structure 
SQLTELHADIDARVASIRENKADWLCGKGCDSCCKRLAEVPRLTAAEWDLLREGLAGLA
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
PDHLQAISREITAVANSTARPVICPLLDRSSGACPVYLHRPVACRTYGFYMQRDLGLFCR
HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH
DIEKEVAAGALPDVVWGNHDAIDRRLAGLGESRALTEWFADWQATGDAAGQATTFVFNDG
HHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA