Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is 71906746

Identifier: 71906746

GI number: 71906746

Start: 1208939

End: 1210714

Strand: Reverse

Name: 71906746

Synonym: Daro_1107

Alternate gene names: NA

Gene position: 1210714-1208939 (Counterclockwise)

Preceding gene: 71906747

Following gene: 71906744

Centisome position: 26.9

GC content: 41.78

Gene sequence:

>1776_bases
ATGGCTGTCCTTCGTATAACCAGTGTTCGATTTAGTAGATATAAGGCTTTCGATGATTTTCAAATAGCCCTGCAGGATTT
TAATGTCTTGGTTGGGCCAAATAACGCAGGGAAGTCCACGATTATCAGTGCATTTCGTATTTTGGCAGAGGGGATGCGGC
GTGCAAGAGCAAGAAGTCCGGAGCGAATTGATGTACCCACCTTTTCCGGCTTGGGTTACAGGATAAACATAAATGAACTC
CCGATTGCTTCGGAAAACATCTTCTTTGATTATGACGATAGCACCCCAGCTCAGATCAAGTTCCGACTTTCAAATGGAAA
CCATCTAAGGCTTTTATTTCCAGAGCAGCGGTCATGTATTTTGATTGCTGAGTCCAATGGAAAACTTCCTCGCACCCCTT
CTCAATTTAAGGCTGATTTTGACTTTGAGATTGGTTTTGTCCCAATTCTAGGCCCTGTGGATCAGAAAGAGTCGCTATAT
GCGAAAGAAGCTGCCCGTTTGGCGCTATTAACATCAGGTGCCTCCAGAAATTTCAGAAACATTTGGTATCATTACCCTGA
AGGTTTTGACTCATTTCGCCAACTGATAAAAACAACTTGGCCAGGGATGGATATTGAACCTCCTGAGCTATCTCCAAATC
ATCGTGATCTTGCTATGTTTTGCCCAGAAGATCGCCACCCTCGTGAAATATGTTGGGCAGGCTACGGATTTCAAGTTTGG
TGTCAGATGCTGACTCACGTCGTAAAAGCGTCAAAAGCATCTTTACTAGTTATCGATGAACCAGATATTTACCTTCACTC
TGACCTCCAGCGTCAATTGGTTTCACTGCTGCGTGAATTAGGGCCAGATATTCTAATTGCCACTCATTCAACAGAAATAA
TTGTTGAATGCGAACCAAACAATCTCGTTAATATTAGCAAGAAAAACAAGAGCGCTCAGCGCGTAAAGGACATCTCACAG
CTTAAGCTTGTATTCTCAGCCCTTGGTTCTAATCTGAATCCAATTCTTACTCAGCTCTCCAAAACAAAACGTGTGGTTTT
TGTTGAAGGGCTTGATTTTCAAATTATTAGCGTCTTTGCAAGGGTACTTGGTTATCAAAGAGTGGCCAATCGTTCAGATT
TTGCAGTTGTAAAAATTGAAGGATTCAATCCAAAGAGAGCTGTTGACCTTACTTCCGGCATTGAAGCTACTGTAGGTAGT
AACATTGCGCGCGCTGTTATTCTTGATCGAGACTATAGACCAGAGTCAGAAATTATTGACGTAACGAAAGAACTGCAAAA
ACATGGATTTATGGCTCATATCCACAAACGCAAGGAAATTGAAAATTATCTTCTGGATAAAAATGCATTGGAACGTGCAA
TTGATTCCCGTTTGATCGAACGAGCTCGACGATCTGGAACAGCAAAACAAGAATTGCCAGATGTCGAAAAAATTATCGAA
GATGCGATGAAAACGTGCAAGCATTCAGTATTTGGACAAATTCAAGCTAGAGCAGTAGAGTTTTCTCGGAAGAAAACACC
TCATATTGATCAAGCCACAATTACTGAGGAAATTTCTAGAGAATTTGAAGAACAGTGGTCCTCTAGTGCAGGCCGCTTAG
CCTTGGTACCGGGAAAAGAAGTATTAGCATCAATTAATGCTGCGCTTCAGTCATCTGTCGGAATTTCGGTATCTGATGGT
CAGATCGTGGGAAGTTTCAAGCCGACTGAGGTACACCAAGACATTAAGAACCTTATCGATGAATTAGGAAAATTCTCAAC
ATCCAATAACCAATAG

Upstream 100 bases:

>100_bases
TGACTAGGGCGACTAGGGAGTTGGTGGTGGTTGGCGGTGAAACCAGTTAACTCTGGCCCTATTTATATTAACTTGAAAAT
TTCATGAATAAGGTTATTAA

Downstream 100 bases:

>100_bases
CTAAAGGGGTCAGAACGAATTGGTTTTTCTGACTCCCACGGTCAACCGCAACAATAGGGGTCAGACCCCTGTCGTTTAAC
TAGCTCAGCCTTCGATCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 591; Mature: 590

Protein sequence:

>591_residues
MAVLRITSVRFSRYKAFDDFQIALQDFNVLVGPNNAGKSTIISAFRILAEGMRRARARSPERIDVPTFSGLGYRININEL
PIASENIFFDYDDSTPAQIKFRLSNGNHLRLLFPEQRSCILIAESNGKLPRTPSQFKADFDFEIGFVPILGPVDQKESLY
AKEAARLALLTSGASRNFRNIWYHYPEGFDSFRQLIKTTWPGMDIEPPELSPNHRDLAMFCPEDRHPREICWAGYGFQVW
CQMLTHVVKASKASLLVIDEPDIYLHSDLQRQLVSLLRELGPDILIATHSTEIIVECEPNNLVNISKKNKSAQRVKDISQ
LKLVFSALGSNLNPILTQLSKTKRVVFVEGLDFQIISVFARVLGYQRVANRSDFAVVKIEGFNPKRAVDLTSGIEATVGS
NIARAVILDRDYRPESEIIDVTKELQKHGFMAHIHKRKEIENYLLDKNALERAIDSRLIERARRSGTAKQELPDVEKIIE
DAMKTCKHSVFGQIQARAVEFSRKKTPHIDQATITEEISREFEEQWSSSAGRLALVPGKEVLASINAALQSSVGISVSDG
QIVGSFKPTEVHQDIKNLIDELGKFSTSNNQ

Sequences:

>Translated_591_residues
MAVLRITSVRFSRYKAFDDFQIALQDFNVLVGPNNAGKSTIISAFRILAEGMRRARARSPERIDVPTFSGLGYRININEL
PIASENIFFDYDDSTPAQIKFRLSNGNHLRLLFPEQRSCILIAESNGKLPRTPSQFKADFDFEIGFVPILGPVDQKESLY
AKEAARLALLTSGASRNFRNIWYHYPEGFDSFRQLIKTTWPGMDIEPPELSPNHRDLAMFCPEDRHPREICWAGYGFQVW
CQMLTHVVKASKASLLVIDEPDIYLHSDLQRQLVSLLRELGPDILIATHSTEIIVECEPNNLVNISKKNKSAQRVKDISQ
LKLVFSALGSNLNPILTQLSKTKRVVFVEGLDFQIISVFARVLGYQRVANRSDFAVVKIEGFNPKRAVDLTSGIEATVGS
NIARAVILDRDYRPESEIIDVTKELQKHGFMAHIHKRKEIENYLLDKNALERAIDSRLIERARRSGTAKQELPDVEKIIE
DAMKTCKHSVFGQIQARAVEFSRKKTPHIDQATITEEISREFEEQWSSSAGRLALVPGKEVLASINAALQSSVGISVSDG
QIVGSFKPTEVHQDIKNLIDELGKFSTSNNQ
>Mature_590_residues
AVLRITSVRFSRYKAFDDFQIALQDFNVLVGPNNAGKSTIISAFRILAEGMRRARARSPERIDVPTFSGLGYRININELP
IASENIFFDYDDSTPAQIKFRLSNGNHLRLLFPEQRSCILIAESNGKLPRTPSQFKADFDFEIGFVPILGPVDQKESLYA
KEAARLALLTSGASRNFRNIWYHYPEGFDSFRQLIKTTWPGMDIEPPELSPNHRDLAMFCPEDRHPREICWAGYGFQVWC
QMLTHVVKASKASLLVIDEPDIYLHSDLQRQLVSLLRELGPDILIATHSTEIIVECEPNNLVNISKKNKSAQRVKDISQL
KLVFSALGSNLNPILTQLSKTKRVVFVEGLDFQIISVFARVLGYQRVANRSDFAVVKIEGFNPKRAVDLTSGIEATVGSN
IARAVILDRDYRPESEIIDVTKELQKHGFMAHIHKRKEIENYLLDKNALERAIDSRLIERARRSGTAKQELPDVEKIIED
AMKTCKHSVFGQIQARAVEFSRKKTPHIDQATITEEISREFEEQWSSSAGRLALVPGKEVLASINAALQSSVGISVSDGQ
IVGSFKPTEVHQDIKNLIDELGKFSTSNNQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66610; Mature: 66479

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVLRITSVRFSRYKAFDDFQIALQDFNVLVGPNNAGKSTIISAFRILAEGMRRARARSP
CEEEEEEHHHHHHHCCCCHHHHEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCC
ERIDVPTFSGLGYRININELPIASENIFFDYDDSTPAQIKFRLSNGNHLRLLFPEQRSCI
CEECCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEE
LIAESNGKLPRTPSQFKADFDFEIGFVPILGPVDQKESLYAKEAARLALLTSGASRNFRN
EEECCCCCCCCCHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHEEEEECCCCCCCCC
IWYHYPEGFDSFRQLIKTTWPGMDIEPPELSPNHRDLAMFCPEDRHPREICWAGYGFQVW
EEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHEECCCCHHHH
CQMLTHVVKASKASLLVIDEPDIYLHSDLQRQLVSLLRELGPDILIATHSTEIIVECEPN
HHHHHHHHHCCCCCEEEEECCCCEECCHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCC
NLVNISKKNKSAQRVKDISQLKLVFSALGSNLNPILTQLSKTKRVVFVEGLDFQIISVFA
CEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCHHHHHHHH
RVLGYQRVANRSDFAVVKIEGFNPKRAVDLTSGIEATVGSNIARAVILDRDYRPESEIID
HHHHHHHHCCCCCEEEEEEECCCCCCEEECCCCCCHHHCCCCEEEEEECCCCCCHHHHHH
VTKELQKHGFMAHIHKRKEIENYLLDKNALERAIDSRLIERARRSGTAKQELPDVEKIIE
HHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHH
DAMKTCKHSVFGQIQARAVEFSRKKTPHIDQATITEEISREFEEQWSSSAGRLALVPGKE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHH
VLASINAALQSSVGISVSDGQIVGSFKPTEVHQDIKNLIDELGKFSTSNNQ
HHHHHHHHHHHCCCEEECCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
AVLRITSVRFSRYKAFDDFQIALQDFNVLVGPNNAGKSTIISAFRILAEGMRRARARSP
EEEEEEHHHHHHHCCCCHHHHEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCC
ERIDVPTFSGLGYRININELPIASENIFFDYDDSTPAQIKFRLSNGNHLRLLFPEQRSCI
CEECCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEE
LIAESNGKLPRTPSQFKADFDFEIGFVPILGPVDQKESLYAKEAARLALLTSGASRNFRN
EEECCCCCCCCCHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHEEEEECCCCCCCCC
IWYHYPEGFDSFRQLIKTTWPGMDIEPPELSPNHRDLAMFCPEDRHPREICWAGYGFQVW
EEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHEECCCCHHHH
CQMLTHVVKASKASLLVIDEPDIYLHSDLQRQLVSLLRELGPDILIATHSTEIIVECEPN
HHHHHHHHHCCCCCEEEEECCCCEECCHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCC
NLVNISKKNKSAQRVKDISQLKLVFSALGSNLNPILTQLSKTKRVVFVEGLDFQIISVFA
CEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCHHHHHHHH
RVLGYQRVANRSDFAVVKIEGFNPKRAVDLTSGIEATVGSNIARAVILDRDYRPESEIID
HHHHHHHHCCCCCEEEEEEECCCCCCEEECCCCCCHHHCCCCEEEEEECCCCCCHHHHHH
VTKELQKHGFMAHIHKRKEIENYLLDKNALERAIDSRLIERARRSGTAKQELPDVEKIIE
HHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHH
DAMKTCKHSVFGQIQARAVEFSRKKTPHIDQATITEEISREFEEQWSSSAGRLALVPGKE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHH
VLASINAALQSSVGISVSDGQIVGSFKPTEVHQDIKNLIDELGKFSTSNNQ
HHHHHHHHHHHCCCEEECCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA