| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
Click here to switch to the map view.
The map label for this gene is 71906732
Identifier: 71906732
GI number: 71906732
Start: 1196493
End: 1196807
Strand: Reverse
Name: 71906732
Synonym: Daro_1093
Alternate gene names: NA
Gene position: 1196807-1196493 (Counterclockwise)
Preceding gene: 71906735
Following gene: 71906731
Centisome position: 26.59
GC content: 58.73
Gene sequence:
>315_bases ATGAGCATGGCCATCAGATCAAGATCTTTCTGGGATGGCGACGAAACCGTCACCCATTTCCAGCCGCGCCCGGAACACAC GGCTATTCCCGGTTTTGTCTATGGCAGCCTGCTGGCTTCGCTGATAGATTGCCATGGTACCGGGACGGCGGCAGCGGCAA TCTATCTGGCCGAGTCCTCGATATTCGCGGCAAGGTCAAAGGAAATCAAGGGGCGCAACGTGGTGGTCGAAGCGACGGTA TATGCCGAGGGCGAGGCCACCGCACGCGGCGAAGCGGATGCCCTGCAGATACCGGATAGCTTCGTGGCGAAATAA
Upstream 100 bases:
>100_bases CGCTAGGTTGCTCGTTTCAAATCGCAGGAAGAAAGCATGCAGGCTTTTCAGGATTACTACCTGGAGGCGCTGGCCCATTG CTACGGCTACGGCCGCAATA
Downstream 100 bases:
>100_bases TCGCGAACACCCTGACATCGCGGCGGCGGGGCTGTCGGGGGCTGATGCCGGTTGATTCTGGCTGTCCCCAGCAGCGTTCA TCGGAAATCACTGCGACATC
Product: hypothetical protein
Products: NA
Alternate protein names: Thioesterase Family Protein
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MSMAIRSRSFWDGDETVTHFQPRPEHTAIPGFVYGSLLASLIDCHGTGTAAAAIYLAESSIFAARSKEIKGRNVVVEATV YAEGEATARGEADALQIPDSFVAK
Sequences:
>Translated_104_residues MSMAIRSRSFWDGDETVTHFQPRPEHTAIPGFVYGSLLASLIDCHGTGTAAAAIYLAESSIFAARSKEIKGRNVVVEATV YAEGEATARGEADALQIPDSFVAK >Mature_103_residues SMAIRSRSFWDGDETVTHFQPRPEHTAIPGFVYGSLLASLIDCHGTGTAAAAIYLAESSIFAARSKEIKGRNVVVEATVY AEGEATARGEADALQIPDSFVAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11104; Mature: 10972
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMAIRSRSFWDGDETVTHFQPRPEHTAIPGFVYGSLLASLIDCHGTGTAAAAIYLAESS CCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHEEEEEECCC IFAARSKEIKGRNVVVEATVYAEGEATARGEADALQIPDSFVAK EEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEECCHHHHCC >Mature Secondary Structure SMAIRSRSFWDGDETVTHFQPRPEHTAIPGFVYGSLLASLIDCHGTGTAAAAIYLAESS CCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHEEEEEECCC IFAARSKEIKGRNVVVEATVYAEGEATARGEADALQIPDSFVAK EEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEECCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA