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The map label for this gene is fnr [C]

Identifier: 71906728

GI number: 71906728

Start: 1194182

End: 1194838

Strand: Reverse

Name: fnr [C]

Synonym: Daro_1089

Alternate gene names: 71906728

Gene position: 1194838-1194182 (Counterclockwise)

Preceding gene: 71906731

Following gene: 71906727

Centisome position: 26.55

GC content: 63.77

Gene sequence:

>657_bases
ATGCACGCTCACGCCCATCTCGCCAGACCCGACCTCGCCGCCACGGCGCATGAAGCACTGCTCGCCGGTTTCACGCTGCG
CGAGTTGCCCAAAGGCTACCTGCTCTCGACGCCGGAATCCCCTCACAACCAGGTGCTGATGGTCCATTCCGGGCGTTTAC
GCGTTTATCTGGCCGGCGACAACCGGGAACTCAACCTGAGTTTTCTTGAAGCCAGTGACATCTACACGACCCACACGCCG
ACCTATGTCGAAGCCGTTGTCCCGAGCAGCATCTGGCTGATCGACACGCCGACATTCGCCCGCAAGCTGGCCACCGATCC
CTCGGTAACGCCAGCCATGATGCGGGTCATGGGGCGCCTGCTGAGCAATGCAGTCGGCCTCATCGAAGACCTCGCCTTTC
GCGAAGTGCCAGCCCGGCTCGCCCGCTTTCTCTGGCAACTGGCCGAGCGGCGCGGCCATCGGCTGGAACACGGCTGGCTG
GTACCGCTCGATTTCAGCATGCAGGACATCGCCAGCCTGCTCGGCACGACGCGGCAGAGCGTTTCCTCGCTGATCAACCA
GTGGGAGCGCGAGGGTGTGCTGCAGCGCCAAAGCCGACGCAGCCTGCTCGTCCCATCGCTCGATAGCCTGAAGGCACGCA
GCACTCCCGTTCCTTGA

Upstream 100 bases:

>100_bases
CGCGGCCTGTCGCAAAACCGGCATTTGCGCTGACCAGAAAAATTTAAATCATTGGAATCAACAATCTGGCCTTGGGCATC
GCTCTTGCATGAATCAATCC

Downstream 100 bases:

>100_bases
GCCAAAACGTCGGCCAGCCGACGGACAGCAGCGCGCCGTGCCGGCTAAAGTTGTTCCAGACAACTTTCAGGAGAACGCCA
TGCCTCAAGACTGCGCTTGC

Product: Crp/FNR family transcriptional regulator

Products: NA

Alternate protein names: Crp/FNR Family Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Transcriptional Regulator; Carbon Monoxide Dehydrogenase CooA Protein; Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulator MrpC; CRP Family Global Nitrogen Regulatory Protein

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MHAHAHLARPDLAATAHEALLAGFTLRELPKGYLLSTPESPHNQVLMVHSGRLRVYLAGDNRELNLSFLEASDIYTTHTP
TYVEAVVPSSIWLIDTPTFARKLATDPSVTPAMMRVMGRLLSNAVGLIEDLAFREVPARLARFLWQLAERRGHRLEHGWL
VPLDFSMQDIASLLGTTRQSVSSLINQWEREGVLQRQSRRSLLVPSLDSLKARSTPVP

Sequences:

>Translated_218_residues
MHAHAHLARPDLAATAHEALLAGFTLRELPKGYLLSTPESPHNQVLMVHSGRLRVYLAGDNRELNLSFLEASDIYTTHTP
TYVEAVVPSSIWLIDTPTFARKLATDPSVTPAMMRVMGRLLSNAVGLIEDLAFREVPARLARFLWQLAERRGHRLEHGWL
VPLDFSMQDIASLLGTTRQSVSSLINQWEREGVLQRQSRRSLLVPSLDSLKARSTPVP
>Mature_218_residues
MHAHAHLARPDLAATAHEALLAGFTLRELPKGYLLSTPESPHNQVLMVHSGRLRVYLAGDNRELNLSFLEASDIYTTHTP
TYVEAVVPSSIWLIDTPTFARKLATDPSVTPAMMRVMGRLLSNAVGLIEDLAFREVPARLARFLWQLAERRGHRLEHGWL
VPLDFSMQDIASLLGTTRQSVSSLINQWEREGVLQRQSRRSLLVPSLDSLKARSTPVP

Specific function: Global Transcription Factor That Controls The Expression Of Over 100 Target Genes In Response To Anoxia. It Facilitates The Adaptation To Anaerobic Growth Conditions By Regulating The Expression Of Gene Products That Are Involved In Anaerobic Energy Metab

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24387; Mature: 24387

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAHAHLARPDLAATAHEALLAGFTLRELPKGYLLSTPESPHNQVLMVHSGRLRVYLAGD
CCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCEECCCCCCCCCEEEEECCEEEEEEECC
NRELNLSFLEASDIYTTHTPTYVEAVVPSSIWLIDTPTFARKLATDPSVTPAMMRVMGRL
CCEEEEEEEECCCCEECCCCHHHHHCCCCEEEEEECHHHHHHHCCCCCCCHHHHHHHHHH
LSNAVGLIEDLAFREVPARLARFLWQLAERRGHRLEHGWLVPLDFSMQDIASLLGTTRQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
VSSLINQWEREGVLQRQSRRSLLVPSLDSLKARSTPVP
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCC
>Mature Secondary Structure
MHAHAHLARPDLAATAHEALLAGFTLRELPKGYLLSTPESPHNQVLMVHSGRLRVYLAGD
CCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCEECCCCCCCCCEEEEECCEEEEEEECC
NRELNLSFLEASDIYTTHTPTYVEAVVPSSIWLIDTPTFARKLATDPSVTPAMMRVMGRL
CCEEEEEEEECCCCEECCCCHHHHHCCCCEEEEEECHHHHHHHCCCCCCCHHHHHHHHHH
LSNAVGLIEDLAFREVPARLARFLWQLAERRGHRLEHGWLVPLDFSMQDIASLLGTTRQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHH
VSSLINQWEREGVLQRQSRRSLLVPSLDSLKARSTPVP
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA