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The map label for this gene is yccA [C]

Identifier: 71906491

GI number: 71906491

Start: 924806

End: 925498

Strand: Reverse

Name: yccA [C]

Synonym: Daro_0852

Alternate gene names: 71906491

Gene position: 925498-924806 (Counterclockwise)

Preceding gene: 71906492

Following gene: 71906489

Centisome position: 20.56

GC content: 57.86

Gene sequence:

>693_bases
ATGAACACCAACTTCGAGATTGCCAACCAGGGCTCTTCGGGGCTTGCACTGCAGCAGAACCGCGTTCTGCGCAATACCTA
CATGCTACTCGGCCTGTCCATGGTGCCGACGGTTATCGGCGCACTGGTCGGCATCCAGATGGGATTCAGCTTCCTGGCGG
GCAGCCCTCTCATGTCTTTCCTGCTCTTCATGGGCATCGCCATGGGCTTCATGTGGGGCATTGAGAAAAACAAGGACAGC
GGCCTGGGTGTCGCCCTGCTGCTCGGCTTTACCTTCTTCATGGGCCTGATGCTGTCGCGCATCCTGCAAGTCGCGCTAGG
TTTCTCCAATGGCGGCTCGATGATTGCCATGGCGGCAGGCGGCACGGGTGCCGTGTTCTTCACGATGTCGACCGTCGCCG
CTGTCAGCAAGCGGGATTTCACCGGCATGGGAAAATTCCTGTTCGTCGGCATGATCGTCATTTTGCTCGCTGCCGTTGCG
AACATCTTCTTCCAGATTCCTGCGCTGTCGCTGACCATTGCCGTCGCAGTCGTTGGCATCTTCTCGGCTTATATCCTGTA
CGACATCAGCCGTATCGTCCAAGGCGGCGAAACCAACTACGTCAGTGCCACCCTGGCGGTCTATCTGGACGTATACAACG
TATTCGTCAGCCTACTGCAGCTGATCATGGCGTTCACCGGCGAGCGCGACTGA

Upstream 100 bases:

>100_bases
ACCGGCGGCCAGCCTGCCGGATCACTCAGGAATAATTGAAACTTCGGCCCCGCTCCGTTAGTCTTAACACCTGTCGAAAT
AATATAAGGGAGTTTCCCGC

Downstream 100 bases:

>100_bases
GCGCGGTTCATCAGTCGCAAAAAAGGCGGCCAAGGCCGCCTTTTTCATGCGCTCTCGAACCACTCGATCATGGCAGTTCG
AAAACGGCAATCGATTCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MNTNFEIANQGSSGLALQQNRVLRNTYMLLGLSMVPTVIGALVGIQMGFSFLAGSPLMSFLLFMGIAMGFMWGIEKNKDS
GLGVALLLGFTFFMGLMLSRILQVALGFSNGGSMIAMAAGGTGAVFFTMSTVAAVSKRDFTGMGKFLFVGMIVILLAAVA
NIFFQIPALSLTIAVAVVGIFSAYILYDISRIVQGGETNYVSATLAVYLDVYNVFVSLLQLIMAFTGERD

Sequences:

>Translated_230_residues
MNTNFEIANQGSSGLALQQNRVLRNTYMLLGLSMVPTVIGALVGIQMGFSFLAGSPLMSFLLFMGIAMGFMWGIEKNKDS
GLGVALLLGFTFFMGLMLSRILQVALGFSNGGSMIAMAAGGTGAVFFTMSTVAAVSKRDFTGMGKFLFVGMIVILLAAVA
NIFFQIPALSLTIAVAVVGIFSAYILYDISRIVQGGETNYVSATLAVYLDVYNVFVSLLQLIMAFTGERD
>Mature_230_residues
MNTNFEIANQGSSGLALQQNRVLRNTYMLLGLSMVPTVIGALVGIQMGFSFLAGSPLMSFLLFMGIAMGFMWGIEKNKDS
GLGVALLLGFTFFMGLMLSRILQVALGFSNGGSMIAMAAGGTGAVFFTMSTVAAVSKRDFTGMGKFLFVGMIVILLAAVA
NIFFQIPALSLTIAVAVVGIFSAYILYDISRIVQGGETNYVSATLAVYLDVYNVFVSLLQLIMAFTGERD

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787205, Length=214, Percent_Identity=38.785046728972, Blast_Score=123, Evalue=9e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 24495; Mature: 24495

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.0 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTNFEIANQGSSGLALQQNRVLRNTYMLLGLSMVPTVIGALVGIQMGFSFLAGSPLMSF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LLFMGIAMGFMWGIEKNKDSGLGVALLLGFTFFMGLMLSRILQVALGFSNGGSMIAMAAG
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
GTGAVFFTMSTVAAVSKRDFTGMGKFLFVGMIVILLAAVANIFFQIPALSLTIAVAVVGI
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSAYILYDISRIVQGGETNYVSATLAVYLDVYNVFVSLLQLIMAFTGERD
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNTNFEIANQGSSGLALQQNRVLRNTYMLLGLSMVPTVIGALVGIQMGFSFLAGSPLMSF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LLFMGIAMGFMWGIEKNKDSGLGVALLLGFTFFMGLMLSRILQVALGFSNGGSMIAMAAG
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
GTGAVFFTMSTVAAVSKRDFTGMGKFLFVGMIVILLAAVANIFFQIPALSLTIAVAVVGI
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSAYILYDISRIVQGGETNYVSATLAVYLDVYNVFVSLLQLIMAFTGERD
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]