Click here to switch to the map view.

The map label for this gene is fliD [H]

Identifier: 71906421

GI number: 71906421

Start: 847662

End: 849020

Strand: Reverse

Name: fliD [H]

Synonym: Daro_0782

Alternate gene names: 71906421

Gene position: 849020-847662 (Counterclockwise)

Preceding gene: 71906422

Following gene: 71906420

Centisome position: 18.86

GC content: 55.78

Gene sequence:

>1359_bases
ATGGCAACCATTACCTCACTAGGCGCTGGCTCGGGGCTCGACCTTGAGTCCCTGGTCACCAAGCTCATGTCGGTCGAAAA
AGCGCCTCTCAACGCCCTCACGAAGAAGGAAAGCGCGGTTAACACCAAGATTTCTGCCTTCGGCACCCTGTCGAGCAAGT
TGTCCGCACTGCAAACCGCCGCCCAAGCGTTGAAGGCCAACATAGGGCAAACCGCGCTCCAGAAGTTCGCCACCTACAGT
ACGACCGTTGCCGATACCAGCATTGCCTCTGCCACTGCAGGGACAGGTGCGGTGGCCGGCACCTACACGCTGAATGTCAC
CAAACTGGCGGTTTCCGACCAGTTTGTCTCAAACACCGTAACGTCAACCAGTGATCCGATTGGCACCGCTGGCGACACCC
TGACGTTCGCTTTTGCGACCCCCGATGCCAATGGCAACAGCCGTTCGAAGACAATTACGCTTGATAGCAGCAACAATTCA
CTCACCGGCCTGCGTAATTCCATCAATGGCGCAAACATGGGCATTACGGCGACCATCATCACGGGAAGCGCTGGCGCACA
ACTGGTCCTCACCGGCGAACAGGGTCTCGATAACAAGATCACACTAGGCGGCAATCTAGCCAGCCAGCTGACCCAGACGG
CAACTGCAGATAGTGCAGCCTTCACGGTAAACGGCATTGCCGCCACCAGCAATACGAATGCAGCCAGCAAGGTCATCGAT
GGCGTGACGCTCAATTTGACCAAAACCGGTTCGACGACGCTCACCGTCGCTGCGGAGTATTCAAGCAATCTGTCGACTGC
GCTGAACAGCTTCATCAAGGCCTACAACGATGCCAACAGCACCATGGCCACCATGGGTGCTTACAACGCCACGACCAAGG
TCGCCGGTGCCCTACAGGGCAACTCGCTTCTGCAGGACGCGCGGCAGCAAACACGCAGCCTGGTCTTTGGTACCACTGTC
GGCGGCACATCTGCTTATCAGAGACTGTCTGATATCGGCGTATCCGTCGGCACCGATGGCTCTCTGTCTCTCGACACAAC
CAAGCTGAACAAGGCGCTTGCCTCCGACACGGTCTCCGTGGCAACCTTGGTCGACAAGGTCGGCTCTGCCTTCAATACAA
CACTGGAGCAGGTAGTTGGAACAACGGGCAAAATAAAGATTGCCACCGATAGTGCAAATTCGATGATCAAGGAATTGCAA
AAGCGAGAAGATGCTGTGCAACTCCACCTTGATCAAATTGAAGCGCGTTATCGCAAACGGTTCACGGCTATGGATACGCT
AGTCGCCAAGCTCAATTCGACCAGCACCTATCTAACCACGCAACTGGCCAATCTGACCAGCAGCACATCAAGCAAGTAG

Upstream 100 bases:

>100_bases
GGCGCTTGATCAAATTAAAGGTTTTCTGGTCAAACAAAAGGCGTAAACTGCTTAATCGTCGCGACACGAGCATTCGGCCA
AGCATTGAAGGAGTAGACCC

Downstream 100 bases:

>100_bases
CAAGGAGTCTTCATGTTCGGAACAAGACCTTCACCCACGGCAGCCTATGCCCAAGTCAGCTTGGAGAGTGCTGTACGCAG
CGCCGACCCGCATCGACTTG

Product: flagellar hook-associated protein 2, N-terminal:flagellar hook-associated 2, C-terminal

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MATITSLGAGSGLDLESLVTKLMSVEKAPLNALTKKESAVNTKISAFGTLSSKLSALQTAAQALKANIGQTALQKFATYS
TTVADTSIASATAGTGAVAGTYTLNVTKLAVSDQFVSNTVTSTSDPIGTAGDTLTFAFATPDANGNSRSKTITLDSSNNS
LTGLRNSINGANMGITATIITGSAGAQLVLTGEQGLDNKITLGGNLASQLTQTATADSAAFTVNGIAATSNTNAASKVID
GVTLNLTKTGSTTLTVAAEYSSNLSTALNSFIKAYNDANSTMATMGAYNATTKVAGALQGNSLLQDARQQTRSLVFGTTV
GGTSAYQRLSDIGVSVGTDGSLSLDTTKLNKALASDTVSVATLVDKVGSAFNTTLEQVVGTTGKIKIATDSANSMIKELQ
KREDAVQLHLDQIEARYRKRFTAMDTLVAKLNSTSTYLTTQLANLTSSTSSK

Sequences:

>Translated_452_residues
MATITSLGAGSGLDLESLVTKLMSVEKAPLNALTKKESAVNTKISAFGTLSSKLSALQTAAQALKANIGQTALQKFATYS
TTVADTSIASATAGTGAVAGTYTLNVTKLAVSDQFVSNTVTSTSDPIGTAGDTLTFAFATPDANGNSRSKTITLDSSNNS
LTGLRNSINGANMGITATIITGSAGAQLVLTGEQGLDNKITLGGNLASQLTQTATADSAAFTVNGIAATSNTNAASKVID
GVTLNLTKTGSTTLTVAAEYSSNLSTALNSFIKAYNDANSTMATMGAYNATTKVAGALQGNSLLQDARQQTRSLVFGTTV
GGTSAYQRLSDIGVSVGTDGSLSLDTTKLNKALASDTVSVATLVDKVGSAFNTTLEQVVGTTGKIKIATDSANSMIKELQ
KREDAVQLHLDQIEARYRKRFTAMDTLVAKLNSTSTYLTTQLANLTSSTSSK
>Mature_451_residues
ATITSLGAGSGLDLESLVTKLMSVEKAPLNALTKKESAVNTKISAFGTLSSKLSALQTAAQALKANIGQTALQKFATYST
TVADTSIASATAGTGAVAGTYTLNVTKLAVSDQFVSNTVTSTSDPIGTAGDTLTFAFATPDANGNSRSKTITLDSSNNSL
TGLRNSINGANMGITATIITGSAGAQLVLTGEQGLDNKITLGGNLASQLTQTATADSAAFTVNGIAATSNTNAASKVIDG
VTLNLTKTGSTTLTVAAEYSSNLSTALNSFIKAYNDANSTMATMGAYNATTKVAGALQGNSLLQDARQQTRSLVFGTTVG
GTSAYQRLSDIGVSVGTDGSLSLDTTKLNKALASDTVSVATLVDKVGSAFNTTLEQVVGTTGKIKIATDSANSMIKELQK
REDAVQLHLDQIEARYRKRFTAMDTLVAKLNSTSTYLTTQLANLTSSTSSK

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=481, Percent_Identity=34.5114345114345, Blast_Score=179, Evalue=5e-46,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 46214; Mature: 46083

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATITSLGAGSGLDLESLVTKLMSVEKAPLNALTKKESAVNTKISAFGTLSSKLSALQTA
CCEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AQALKANIGQTALQKFATYSTTVADTSIASATAGTGAVAGTYTLNVTKLAVSDQFVSNTV
HHHHHHCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEEEEEEEEEECHHHHHHCC
TSTSDPIGTAGDTLTFAFATPDANGNSRSKTITLDSSNNSLTGLRNSINGANMGITATII
CCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCEEEEEE
TGSAGAQLVLTGEQGLDNKITLGGNLASQLTQTATADSAAFTVNGIAATSNTNAASKVID
ECCCCCEEEEECCCCCCCEEEECCHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHC
GVTLNLTKTGSTTLTVAAEYSSNLSTALNSFIKAYNDANSTMATMGAYNATTKVAGALQG
CEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHCCC
NSLLQDARQQTRSLVFGTTVGGTSAYQRLSDIGVSVGTDGSLSLDTTKLNKALASDTVSV
HHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHH
ATLVDKVGSAFNTTLEQVVGTTGKIKIATDSANSMIKELQKREDAVQLHLDQIEARYRKR
HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTAMDTLVAKLNSTSTYLTTQLANLTSSTSSK
HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ATITSLGAGSGLDLESLVTKLMSVEKAPLNALTKKESAVNTKISAFGTLSSKLSALQTA
CEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AQALKANIGQTALQKFATYSTTVADTSIASATAGTGAVAGTYTLNVTKLAVSDQFVSNTV
HHHHHHCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCEEEEEEEEEEEEEECHHHHHHCC
TSTSDPIGTAGDTLTFAFATPDANGNSRSKTITLDSSNNSLTGLRNSINGANMGITATII
CCCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHCCCCCCCCEEEEEE
TGSAGAQLVLTGEQGLDNKITLGGNLASQLTQTATADSAAFTVNGIAATSNTNAASKVID
ECCCCCEEEEECCCCCCCEEEECCHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHC
GVTLNLTKTGSTTLTVAAEYSSNLSTALNSFIKAYNDANSTMATMGAYNATTKVAGALQG
CEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCHHHHHHHCCC
NSLLQDARQQTRSLVFGTTVGGTSAYQRLSDIGVSVGTDGSLSLDTTKLNKALASDTVSV
HHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHH
ATLVDKVGSAFNTTLEQVVGTTGKIKIATDSANSMIKELQKREDAVQLHLDQIEARYRKR
HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTAMDTLVAKLNSTSTYLTTQLANLTSSTSSK
HHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1527488; 9097040; 9278503; 2659972; 6305924 [H]