| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906317
Identifier: 71906317
GI number: 71906317
Start: 747420
End: 748064
Strand: Reverse
Name: 71906317
Synonym: Daro_0678
Alternate gene names: NA
Gene position: 748064-747420 (Counterclockwise)
Preceding gene: 71906318
Following gene: 71906316
Centisome position: 16.62
GC content: 59.53
Gene sequence:
>645_bases ATGAGCGAAGACAACAAGCCGTCGATCTTCCGCCGCCTGTTCGATCGAGTGTTCCCGAAGATGCCGGATTTCTTCTCCCT GCTGTCCGAACAGTGCGAGCAGGTCGCCCATACGTCGGGGCTGCTCGTCGAGTTCATGGAAACCGGCGACGCCAAGGTCG GTCTTTCAATTCGCCAGGACGAACACGAGGCCGACCGGATCAAGATTCGCAACCTGCACACCCTGAACGAAGCCTTCTCG ACCCCGATCGACCGCGAGGACATCTACCGGGCGATTGTCGACCTCGACGAGATCGTCAATTACTGCAAGACAACCGTCAG CGAAATGGAAGTACTCGACTTGCCACCGGACAAGCACTGCCTGGAAATGGCCATGCACATCAAGCTCGGCACCGATGCGC TGGCCCAAGGCTACGCCCGGCTGGCCAAGCAGCCACTGGAAGCCGCCGCCGATGCCGATTCAGCCCGCAAGGCAGAACGT CGCGTTGAAAAAAACTACCGCCGCGCCATCGCCGAACTGTTCGTCGGCGACAACTACATCCACATGTTCAAGCGCCGCGA AATCTACCGCCACCTGTCCAATGCCGCCGACCGCATGGCCAACTGCGCCAATACGCTGCACGACATCGTGGTCAAGATGA CCTGA
Upstream 100 bases:
>100_bases CCAAGGACATCGCCACGACCTGGCTGATCACCATTCCCGGCGCCGCCATTGTCGCCATCCAGGCCTACGCCCTGGTCCAT CTCTTTCTCGGAGGCCCGCC
Downstream 100 bases:
>100_bases AAACCCCAATAGATCGCCGCATGCTGAAAACCCTGTCGCACCGCCTGCTCTCCCTGCTTGGCTGGACCTTGATCGAGCCG CCGGAACGCCCGGCTCGTGC
Product: phosphate transport regulator-like protein
Products: NA
Alternate protein names: Putitive Phosphate Transport Regulator
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MSEDNKPSIFRRLFDRVFPKMPDFFSLLSEQCEQVAHTSGLLVEFMETGDAKVGLSIRQDEHEADRIKIRNLHTLNEAFS TPIDREDIYRAIVDLDEIVNYCKTTVSEMEVLDLPPDKHCLEMAMHIKLGTDALAQGYARLAKQPLEAAADADSARKAER RVEKNYRRAIAELFVGDNYIHMFKRREIYRHLSNAADRMANCANTLHDIVVKMT
Sequences:
>Translated_214_residues MSEDNKPSIFRRLFDRVFPKMPDFFSLLSEQCEQVAHTSGLLVEFMETGDAKVGLSIRQDEHEADRIKIRNLHTLNEAFS TPIDREDIYRAIVDLDEIVNYCKTTVSEMEVLDLPPDKHCLEMAMHIKLGTDALAQGYARLAKQPLEAAADADSARKAER RVEKNYRRAIAELFVGDNYIHMFKRREIYRHLSNAADRMANCANTLHDIVVKMT >Mature_213_residues SEDNKPSIFRRLFDRVFPKMPDFFSLLSEQCEQVAHTSGLLVEFMETGDAKVGLSIRQDEHEADRIKIRNLHTLNEAFST PIDREDIYRAIVDLDEIVNYCKTTVSEMEVLDLPPDKHCLEMAMHIKLGTDALAQGYARLAKQPLEAAADADSARKAERR VEKNYRRAIAELFVGDNYIHMFKRREIYRHLSNAADRMANCANTLHDIVVKMT
Specific function: Unknown
COG id: COG1392
COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24602; Mature: 24471
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEDNKPSIFRRLFDRVFPKMPDFFSLLSEQCEQVAHTSGLLVEFMETGDAKVGLSIRQD CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCC EHEADRIKIRNLHTLNEAFSTPIDREDIYRAIVDLDEIVNYCKTTVSEMEVLDLPPDKHC CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LEMAMHIKLGTDALAQGYARLAKQPLEAAADADSARKAERRVEKNYRRAIAELFVGDNYI HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH HMFKRREIYRHLSNAADRMANCANTLHDIVVKMT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SEDNKPSIFRRLFDRVFPKMPDFFSLLSEQCEQVAHTSGLLVEFMETGDAKVGLSIRQD CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCC EHEADRIKIRNLHTLNEAFSTPIDREDIYRAIVDLDEIVNYCKTTVSEMEVLDLPPDKHC CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LEMAMHIKLGTDALAQGYARLAKQPLEAAADADSARKAERRVEKNYRRAIAELFVGDNYI HHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH HMFKRREIYRHLSNAADRMANCANTLHDIVVKMT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA