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The map label for this gene is yfjD [C]

Identifier: 71906280

GI number: 71906280

Start: 702910

End: 704181

Strand: Reverse

Name: yfjD [C]

Synonym: Daro_0640

Alternate gene names: 71906280

Gene position: 704181-702910 (Counterclockwise)

Preceding gene: 71906281

Following gene: 71906279

Centisome position: 15.64

GC content: 55.66

Gene sequence:

>1272_bases
ATGACCGATTTGCCGCTATCTGTACTACTGGGAGCGCTTTTTGTCCTCCTGATTCTTTCCGGCATATTTTCGGGCTCCGA
AACCGCGATGATGGCGGCCAACCGCTATCGCTTGCGTCACGCCGCCCAGAACGGCCATCGTGGCGCCAAGCTGGCGCTGG
CGCTGCTGGGAAAAACCGACAAACTGCTCGGCCTCATCTTGCTCGGTAATACGCTGTTCAATGCTGCCGCCGCAACACTA
ACTGGTTACATTGCCTTGGCCCTGTTCGGCGAATCGAAATGGGCGCTGGAAATAGGCACTTTGTGCATTACCTTCGCCTT
GCTGGTCGTCGCCGAAATATCGCCCAAGGTTATCTGCGCTACCCATGCTGACCGCCTGGCGCCCAGGCTCAGCTACATCC
TGACCCCCTTGTTGCGCCTGGCCTACCCGATTATCTGGTTTGTTAATCTTTTCGTGACCGCTCTGCTAAAAGCCATTCGT
CTTGCCCCCAATGGCATGCATGAAGAAACCAAGCTCTCCCCTGAAGAATTGCGCAGCTTGGTTCTGGAGTCAGCACACCT
GATGCCAAAGAAACACCACACGATTCTTTCCAGCCTGTTTGAATTGAACAACATTACGGTCGAAGATGTCATGACCCCCC
GCGGCAACATCGAGATTCTTGACCTCGATCTGCCGTGGGAAGAAGTAAGAAATCAATTGGCTACCAGCCACCACAGTCGC
CTTCCCGCCTGCAGGGAGTCACTGGACCAGCTTATAGGCATCCTGCCGGTGCGGCGACTGTTGGCCAGCCTGGGCGACCC
GGACTTCGACGAACCTGCCCTACTGCAGCAACTCCAACCCCCCTATTACATCCCAGCCGGCACTCCAGTATTCTCTCAAC
TCGCGTTCTTTCAGGAAAATCGCCAGCGCATTGGCTTTGTGGTGGACGAGTACGGCGAAATTCTCGGTCTGTTGACCATG
GAAGACATCATCGAGGAATTCGTCGGCGACTTCACAACATCGCTTCCGGGGCTCGGCCATGAACTACATTGGACAGAAGC
GGGCAATGCCATCGTTGAAGGCTCTCGCCCCTTGCGGGACATAAATCGCATGCTGGATCTGAACTTCCCGATCGACGGCC
CCAAGACACTCAACGGCCTCATTCTGGAACACTTCCAAGACATCCCGGAGTCCGGCATCAGCATCAAACTGGCAGGTGTC
CCCGTGGAAATTTTGCAGACCCAAGACCGAAGTGTCGTCACTGCACGTATCTTCCGCCCCGAAGCTGGCTGA

Upstream 100 bases:

>100_bases
GCTGCGCTGGACCCTTGCCGGTTTTGCTTTGCTGATCCTGGCCTATGTCGGCAGCCGCTTCGTCGCCGAAGTCATTCTCG
GTCGAGTATAAACAAGACCA

Downstream 100 bases:

>100_bases
GCAAAACCCGCCCCCAGCCTTTACAAACAATCGCCTACGTAGCATCATCAAGCGATCTAAACGGCATTTAACATCGATCA
ATGGCGGCAACCCCTCAAAA

Product: CBS:protein of unknown function DUF21:transporter-associated region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MTDLPLSVLLGALFVLLILSGIFSGSETAMMAANRYRLRHAAQNGHRGAKLALALLGKTDKLLGLILLGNTLFNAAAATL
TGYIALALFGESKWALEIGTLCITFALLVVAEISPKVICATHADRLAPRLSYILTPLLRLAYPIIWFVNLFVTALLKAIR
LAPNGMHEETKLSPEELRSLVLESAHLMPKKHHTILSSLFELNNITVEDVMTPRGNIEILDLDLPWEEVRNQLATSHHSR
LPACRESLDQLIGILPVRRLLASLGDPDFDEPALLQQLQPPYYIPAGTPVFSQLAFFQENRQRIGFVVDEYGEILGLLTM
EDIIEEFVGDFTTSLPGLGHELHWTEAGNAIVEGSRPLRDINRMLDLNFPIDGPKTLNGLILEHFQDIPESGISIKLAGV
PVEILQTQDRSVVTARIFRPEAG

Sequences:

>Translated_423_residues
MTDLPLSVLLGALFVLLILSGIFSGSETAMMAANRYRLRHAAQNGHRGAKLALALLGKTDKLLGLILLGNTLFNAAAATL
TGYIALALFGESKWALEIGTLCITFALLVVAEISPKVICATHADRLAPRLSYILTPLLRLAYPIIWFVNLFVTALLKAIR
LAPNGMHEETKLSPEELRSLVLESAHLMPKKHHTILSSLFELNNITVEDVMTPRGNIEILDLDLPWEEVRNQLATSHHSR
LPACRESLDQLIGILPVRRLLASLGDPDFDEPALLQQLQPPYYIPAGTPVFSQLAFFQENRQRIGFVVDEYGEILGLLTM
EDIIEEFVGDFTTSLPGLGHELHWTEAGNAIVEGSRPLRDINRMLDLNFPIDGPKTLNGLILEHFQDIPESGISIKLAGV
PVEILQTQDRSVVTARIFRPEAG
>Mature_422_residues
TDLPLSVLLGALFVLLILSGIFSGSETAMMAANRYRLRHAAQNGHRGAKLALALLGKTDKLLGLILLGNTLFNAAAATLT
GYIALALFGESKWALEIGTLCITFALLVVAEISPKVICATHADRLAPRLSYILTPLLRLAYPIIWFVNLFVTALLKAIRL
APNGMHEETKLSPEELRSLVLESAHLMPKKHHTILSSLFELNNITVEDVMTPRGNIEILDLDLPWEEVRNQLATSHHSRL
PACRESLDQLIGILPVRRLLASLGDPDFDEPALLQQLQPPYYIPAGTPVFSQLAFFQENRQRIGFVVDEYGEILGLLTME
DIIEEFVGDFTTSLPGLGHELHWTEAGNAIVEGSRPLRDINRMLDLNFPIDGPKTLNGLILEHFQDIPESGISIKLAGVP
VEILQTQDRSVVTARIFRPEAG

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=377, Percent_Identity=23.6074270557029, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI40068055, Length=350, Percent_Identity=24, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI40068053, Length=350, Percent_Identity=24, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI94681046, Length=329, Percent_Identity=24.3161094224924, Blast_Score=69, Evalue=8e-12,
Organism=Escherichia coli, GI145693175, Length=400, Percent_Identity=38.25, Blast_Score=293, Evalue=2e-80,
Organism=Escherichia coli, GI1790664, Length=426, Percent_Identity=22.7699530516432, Blast_Score=121, Evalue=8e-29,
Organism=Escherichia coli, GI87082033, Length=262, Percent_Identity=27.4809160305344, Blast_Score=98, Evalue=9e-22,
Organism=Escherichia coli, GI1788119, Length=236, Percent_Identity=26.271186440678, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1786879, Length=264, Percent_Identity=24.6212121212121, Blast_Score=78, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6324512, Length=337, Percent_Identity=24.6290801186944, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 46645; Mature: 46514

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLPLSVLLGALFVLLILSGIFSGSETAMMAANRYRLRHAAQNGHRGAKLALALLGKTD
CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHH
KLLGLILLGNTLFNAAAATLTGYIALALFGESKWALEIGTLCITFALLVVAEISPKVICA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE
THADRLAPRLSYILTPLLRLAYPIIWFVNLFVTALLKAIRLAPNGMHEETKLSPEELRSL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
VLESAHLMPKKHHTILSSLFELNNITVEDVMTPRGNIEILDLDLPWEEVRNQLATSHHSR
HHHHHHCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHC
LPACRESLDQLIGILPVRRLLASLGDPDFDEPALLQQLQPPYYIPAGTPVFSQLAFFQEN
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEECCCCCHHHHHHHHHHHH
RQRIGFVVDEYGEILGLLTMEDIIEEFVGDFTTSLPGLGHELHWTEAGNAIVEGSRPLRD
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEECCCCCHHH
INRMLDLNFPIDGPKTLNGLILEHFQDIPESGISIKLAGVPVEILQTQDRSVVTARIFRP
HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCCCCCCEEEEEEECC
EAG
CCC
>Mature Secondary Structure 
TDLPLSVLLGALFVLLILSGIFSGSETAMMAANRYRLRHAAQNGHRGAKLALALLGKTD
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHH
KLLGLILLGNTLFNAAAATLTGYIALALFGESKWALEIGTLCITFALLVVAEISPKVICA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE
THADRLAPRLSYILTPLLRLAYPIIWFVNLFVTALLKAIRLAPNGMHEETKLSPEELRSL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
VLESAHLMPKKHHTILSSLFELNNITVEDVMTPRGNIEILDLDLPWEEVRNQLATSHHSR
HHHHHHCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHC
LPACRESLDQLIGILPVRRLLASLGDPDFDEPALLQQLQPPYYIPAGTPVFSQLAFFQEN
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEECCCCCHHHHHHHHHHHH
RQRIGFVVDEYGEILGLLTMEDIIEEFVGDFTTSLPGLGHELHWTEAGNAIVEGSRPLRD
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEECCCCCHHH
INRMLDLNFPIDGPKTLNGLILEHFQDIPESGISIKLAGVPVEILQTQDRSVVTARIFRP
HHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCCCCCCEEEEEEECC
EAG
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]