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The map label for this gene is yibP [H]

Identifier: 71906249

GI number: 71906249

Start: 678839

End: 680272

Strand: Reverse

Name: yibP [H]

Synonym: Daro_0609

Alternate gene names: 71906249

Gene position: 680272-678839 (Counterclockwise)

Preceding gene: 71906256

Following gene: 71906248

Centisome position: 15.11

GC content: 61.02

Gene sequence:

>1434_bases
ATGATTATTGAACGACCCCGTGGTGGCGTGCGCGGCACTTGGCGCTCAGGCAAAAGGCTGACGGTGGCGCTGATAGCCGC
CGTTTTCCTTGGCACACCGTTGGTCGACGCCAAGCCATCGGCGAGCGAAAAAAAATCCGCCCCCGCCGTCGCGGCGCCCG
AAATTGCCGAAAAACAGGCCGACTTGGGCGAATTGCGCAGCCGGATAGAGGGACTGCGCAAGGAATTATCGACCAGCGAA
GAGAACAAAGCGGATGCCGGTGACCGCCTGCGTGAATCCGAGCGTCAAATATCCCGGCTCCAACGCGAGTTGCACGAACT
GAACGACCAGCGCAGCCGACTGCAATCCAGGTTAAAAAATCTCGAACAACAATCGCAGGAGCTCGGTGTCACGCTGAGCC
AGCAGCAGGCACAACTGGAAAAACTGCTCTACAAGCAATACCTGCGCGGCACCCCGGACTCCCTGCAGCTATTGCTCAAC
GGCGATGACCCCAATCAGATGGCGCGCGATCTGCACTATCTGTCTGCCATCGCCCTGACCCGCGCCGAACTGATGGGCGA
AATCAACGCGACGCTCGACAAGAAAAAATCACTGGCGGCCGACGCCAAGGAGCGCAGCGCCGAACTGGCCGAAATCGAGG
TTGAACAACAGAAGCGCCATGCCGATTTGCAAAAGCAACGCGAAGACCGCATGGCGCTGTACGCCCAGATCTCCAGCAAG
GTCAGCGCCCAACGCAAGGAAATTGGCAACCTGCAGCAAAACGAACGACGGATGACCCAGCTGATTGACCGGCTGTCGAA
AATCCTCGCCGCCCAAGCGGCACAGGCCGCCAAGGCAGCCGAAGCCGCACGCGCCGCCGAGGCCCGCCAGGCTGCGACGC
GACAGAAGGAAAAAGAGCGCGAGAAGGAACGGGAAAAGGACAAACGCCATCCCCAGACGGAAGAAAGGGAGATCGCCCGT
CCAGCCCCCAATATCGAACCATCCCGACCACGAACAGTCGAAGCGGAGAACCGCTACGAACCGGCAGCCAGCGACGGCAG
CTTCGCCCGCCAGCGGGGAAACCTGCGGCTACCGGTGCGCGGCGCAGTCTCCGGACGCTTCGGGTCGCCCCGCGATGGCG
GCGGCACCTGGCGCGGGCTGTTCATCAAGGCTGGCTCAGGTAGCGAGGTCAAGGCGATTGCCGGCGGCCGCGTCGTCTTC
TCGGAGTGGATGCGCGGCTTCGGCAATTTGCTGATTGTCGACCACGGCGACGCTTATTTATCGATCTACGGCAATAACGA
TTCCTTGCTGAAGCAGGTCGGTCAGGCGGTCAAAGGCGGGGAAACCGTCGCGACCGTCGGGAACAGCGGGGGCAATCCGG
AATCCGGTTTATACTTTGAACTCCGCCACCAAGGGCAACCGATCGACCCGATGAAATGGGCCAGCTTGAAATGA

Upstream 100 bases:

>100_bases
CAAACTGAAGGAAGGCGTTTCCAAGATAAAACCTCGTTATCGGTTAATGACGCATTATAAAATAGCGTTTTACGTTTCGC
GTAACCGAAATCAATCCGGA

Downstream 100 bases:

>100_bases
GCAAAACGAAAACCATTAGCTTGACCGTAGGCGCATTCGTCGCCGGCGCACTGATCAGCCTGAACTTCCCGGCACTCGCC
GACAAGGAGGCGAAGCCCGG

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MIIERPRGGVRGTWRSGKRLTVALIAAVFLGTPLVDAKPSASEKKSAPAVAAPEIAEKQADLGELRSRIEGLRKELSTSE
ENKADAGDRLRESERQISRLQRELHELNDQRSRLQSRLKNLEQQSQELGVTLSQQQAQLEKLLYKQYLRGTPDSLQLLLN
GDDPNQMARDLHYLSAIALTRAELMGEINATLDKKKSLAADAKERSAELAEIEVEQQKRHADLQKQREDRMALYAQISSK
VSAQRKEIGNLQQNERRMTQLIDRLSKILAAQAAQAAKAAEAARAAEARQAATRQKEKEREKEREKDKRHPQTEEREIAR
PAPNIEPSRPRTVEAENRYEPAASDGSFARQRGNLRLPVRGAVSGRFGSPRDGGGTWRGLFIKAGSGSEVKAIAGGRVVF
SEWMRGFGNLLIVDHGDAYLSIYGNNDSLLKQVGQAVKGGETVATVGNSGGNPESGLYFELRHQGQPIDPMKWASLK

Sequences:

>Translated_477_residues
MIIERPRGGVRGTWRSGKRLTVALIAAVFLGTPLVDAKPSASEKKSAPAVAAPEIAEKQADLGELRSRIEGLRKELSTSE
ENKADAGDRLRESERQISRLQRELHELNDQRSRLQSRLKNLEQQSQELGVTLSQQQAQLEKLLYKQYLRGTPDSLQLLLN
GDDPNQMARDLHYLSAIALTRAELMGEINATLDKKKSLAADAKERSAELAEIEVEQQKRHADLQKQREDRMALYAQISSK
VSAQRKEIGNLQQNERRMTQLIDRLSKILAAQAAQAAKAAEAARAAEARQAATRQKEKEREKEREKDKRHPQTEEREIAR
PAPNIEPSRPRTVEAENRYEPAASDGSFARQRGNLRLPVRGAVSGRFGSPRDGGGTWRGLFIKAGSGSEVKAIAGGRVVF
SEWMRGFGNLLIVDHGDAYLSIYGNNDSLLKQVGQAVKGGETVATVGNSGGNPESGLYFELRHQGQPIDPMKWASLK
>Mature_477_residues
MIIERPRGGVRGTWRSGKRLTVALIAAVFLGTPLVDAKPSASEKKSAPAVAAPEIAEKQADLGELRSRIEGLRKELSTSE
ENKADAGDRLRESERQISRLQRELHELNDQRSRLQSRLKNLEQQSQELGVTLSQQQAQLEKLLYKQYLRGTPDSLQLLLN
GDDPNQMARDLHYLSAIALTRAELMGEINATLDKKKSLAADAKERSAELAEIEVEQQKRHADLQKQREDRMALYAQISSK
VSAQRKEIGNLQQNERRMTQLIDRLSKILAAQAAQAAKAAEAARAAEARQAATRQKEKEREKEREKDKRHPQTEEREIAR
PAPNIEPSRPRTVEAENRYEPAASDGSFARQRGNLRLPVRGAVSGRFGSPRDGGGTWRGLFIKAGSGSEVKAIAGGRVVF
SEWMRGFGNLLIVDHGDAYLSIYGNNDSLLKQVGQAVKGGETVATVGNSGGNPESGLYFELRHQGQPIDPMKWASLK

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=452, Percent_Identity=26.7699115044248, Blast_Score=148, Evalue=8e-37,
Organism=Escherichia coli, GI1789099, Length=119, Percent_Identity=38.655462184874, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI87082174, Length=117, Percent_Identity=34.1880341880342, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 52856; Mature: 52856

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIERPRGGVRGTWRSGKRLTVALIAAVFLGTPLVDAKPSASEKKSAPAVAAPEIAEKQA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCHHHHHHC
DLGELRSRIEGLRKELSTSEENKADAGDRLRESERQISRLQRELHELNDQRSRLQSRLKN
CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEQQSQELGVTLSQQQAQLEKLLYKQYLRGTPDSLQLLLNGDDPNQMARDLHYLSAIALT
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCHHHHHHHHHHHHHHHHH
RAELMGEINATLDKKKSLAADAKERSAELAEIEVEQQKRHADLQKQREDRMALYAQISSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSAQRKEIGNLQQNERRMTQLIDRLSKILAAQAAQAAKAAEAARAAEARQAATRQKEKER
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKEREKDKRHPQTEEREIARPAPNIEPSRPRTVEAENRYEPAASDGSFARQRGNLRLPVR
HHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHCCCEEEEEC
GAVSGRFGSPRDGGGTWRGLFIKAGSGSEVKAIAGGRVVFSEWMRGFGNLLIVDHGDAYL
CCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCHHHHHHHHHHCCCEEEEECCCEEE
SIYGNNDSLLKQVGQAVKGGETVATVGNSGGNPESGLYFELRHQGQPIDPMKWASLK
EEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MIIERPRGGVRGTWRSGKRLTVALIAAVFLGTPLVDAKPSASEKKSAPAVAAPEIAEKQA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCHHHHHHC
DLGELRSRIEGLRKELSTSEENKADAGDRLRESERQISRLQRELHELNDQRSRLQSRLKN
CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEQQSQELGVTLSQQQAQLEKLLYKQYLRGTPDSLQLLLNGDDPNQMARDLHYLSAIALT
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHEEEECCCCHHHHHHHHHHHHHHHHH
RAELMGEINATLDKKKSLAADAKERSAELAEIEVEQQKRHADLQKQREDRMALYAQISSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSAQRKEIGNLQQNERRMTQLIDRLSKILAAQAAQAAKAAEAARAAEARQAATRQKEKER
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKEREKDKRHPQTEEREIARPAPNIEPSRPRTVEAENRYEPAASDGSFARQRGNLRLPVR
HHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHCCCEEEEEC
GAVSGRFGSPRDGGGTWRGLFIKAGSGSEVKAIAGGRVVFSEWMRGFGNLLIVDHGDAYL
CCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCHHHHHHHHHHCCCEEEEECCCEEE
SIYGNNDSLLKQVGQAVKGGETVATVGNSGGNPESGLYFELRHQGQPIDPMKWASLK
EEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]