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The map label for this gene is 71906241

Identifier: 71906241

GI number: 71906241

Start: 671810

End: 672403

Strand: Reverse

Name: 71906241

Synonym: Daro_0601

Alternate gene names: NA

Gene position: 672403-671810 (Counterclockwise)

Preceding gene: 71906246

Following gene: 71906240

Centisome position: 14.94

GC content: 57.91

Gene sequence:

>594_bases
GTGACCCTTCTGCTCAAGCTCTCGCAGCTGATCGACTGGCTCAACGAGCGTGTTGCCAGAGGCGCATTCTGGTTGGTTCT
GGCAATGACCATTGTCAGCGCCGGCAACGCGGTCGTGCGCTTTCTTTTTGACTACAGTTCAAACGGCCTGCTGGAGATCC
AGTGGTATCTGTTTGCTGCGGTTTTCCTGCTCTGCTCTCCTTACACCCTGCAACGTAACGAGCATGTCCGCATCGACGTT
TTATCCTGCAAGCTCTCACCACGCGGCCTGGCCGTCATCGACATCATCGGCAGCCTGTTCTTCCTGTTGCCCATGGTCAT
CACGATCCTCTGGCTGTCGCTGCCGCTGATCGCCGACTCCATCAAGATCAATGAAATGTCGGCCAACGCCGGCGGCCTGC
TACGCTGGCCGGTCAAGATCCTGCTGCCGATCGGTTTCACGCTGCTGGCGCTGCAAGGCATTTCCGAGCTGATCAAGCGC
ATTGCCTTCCTGGCCGGAATGATCGACGACCCGAACGACAAGAAAAAAGGCCCGACGGCCGAAGAAGAACTGGCCGCCGC
CATCGCTGCTGCCAAAGCCAAGGAGGCCAAATAA

Upstream 100 bases:

>100_bases
TCCGCCTATGCCCTTCGCTGTAAATTTGGCCCACTGGGATTTCAATTAACCCCGACCACTTCAAGAAATCGGGAATTCTA
TCAACCGAGGAGGAATTTTC

Downstream 100 bases:

>100_bases
TGGAATGGGTCATCGCCAATATGGCGCCGCTGATGTTTGGCGCCCTCGTGCTATTCCTGCTCTTCGGCTACCCGGTTGCC
TTCGCCCTGGCGGCCAACGG

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: TRAP Transporter DctQ-Like Membrane Protein; C4-Dicarboxylate Transporter Family Protein DctQ Subunit; TRAP-Type Transporter Small Permease Component; Tripartite Transporter Small Subunit; TRAP-T Family Tripartite Transporter; TRAP-Type Transport System Small Permease Component; C4-Dicarboxylate Transporter Permease; Tripartite ATP-Independent Periplasmic Transporter; TRAP Mannitol/C4-Dicarboxylate Transporter; Permease Component Of C4 Dicarboxylate Transporter; TRAP Transporter DctQ Family Protein; Transmembrane Transporter Component; TRAP C4-Dicarboxylate Transport System DctQ Subunit; TRAP Dicarboxylate Transporter Subunit DctQ; TRAP Dicarboxylate Family Transporter DctQ Subunit; Small Permease Of TRAP-Type Transporter; Trap Dicarboxylate Transporter Dctm Subunit; Trap-Type Transport System Small Permease Component; TRAP Dicarboxylate Transporter; TRAP-Type Large Permease Component; Mannitol Transporter; TRAP Transporter Small Transmembrane Protein; TRAP Transporter DctQ-Like Membrane Protein Family; Triosephosphate Isomerase (TIM; TRAP Transporter Small Subunit; TRAP Dicarboxylate Transporter DctQ Subunit; Tripartite ATP-Independent Periplasmic Protein; Permease Protein; Tripartite ATP-Independent Periplasmic; C4-Dicarboxylate Transporter Small Subunit

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MTLLLKLSQLIDWLNERVARGAFWLVLAMTIVSAGNAVVRFLFDYSSNGLLEIQWYLFAAVFLLCSPYTLQRNEHVRIDV
LSCKLSPRGLAVIDIIGSLFFLLPMVITILWLSLPLIADSIKINEMSANAGGLLRWPVKILLPIGFTLLALQGISELIKR
IAFLAGMIDDPNDKKKGPTAEEELAAAIAAAKAKEAK

Sequences:

>Translated_197_residues
MTLLLKLSQLIDWLNERVARGAFWLVLAMTIVSAGNAVVRFLFDYSSNGLLEIQWYLFAAVFLLCSPYTLQRNEHVRIDV
LSCKLSPRGLAVIDIIGSLFFLLPMVITILWLSLPLIADSIKINEMSANAGGLLRWPVKILLPIGFTLLALQGISELIKR
IAFLAGMIDDPNDKKKGPTAEEELAAAIAAAKAKEAK
>Mature_196_residues
TLLLKLSQLIDWLNERVARGAFWLVLAMTIVSAGNAVVRFLFDYSSNGLLEIQWYLFAAVFLLCSPYTLQRNEHVRIDVL
SCKLSPRGLAVIDIIGSLFFLLPMVITILWLSLPLIADSIKINEMSANAGGLLRWPVKILLPIGFTLLALQGISELIKRI
AFLAGMIDDPNDKKKGPTAEEELAAAIAAAKAKEAK

Specific function: Unknown

COG id: COG4665

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21708; Mature: 21577

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLLKLSQLIDWLNERVARGAFWLVLAMTIVSAGNAVVRFLFDYSSNGLLEIQWYLFAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEHHHHHHH
VFLLCSPYTLQRNEHVRIDVLSCKLSPRGLAVIDIIGSLFFLLPMVITILWLSLPLIADS
HHHHHCCCEECCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IKINEMSANAGGLLRWPVKILLPIGFTLLALQGISELIKRIAFLAGMIDDPNDKKKGPTA
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
EEELAAAIAAAKAKEAK
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TLLLKLSQLIDWLNERVARGAFWLVLAMTIVSAGNAVVRFLFDYSSNGLLEIQWYLFAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEHHHHHHH
VFLLCSPYTLQRNEHVRIDVLSCKLSPRGLAVIDIIGSLFFLLPMVITILWLSLPLIADS
HHHHHCCCEECCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
IKINEMSANAGGLLRWPVKILLPIGFTLLALQGISELIKRIAFLAGMIDDPNDKKKGPTA
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
EEELAAAIAAAKAKEAK
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA