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The map label for this gene is yeeY [H]

Identifier: 71906192

GI number: 71906192

Start: 613940

End: 614851

Strand: Reverse

Name: yeeY [H]

Synonym: Daro_0552

Alternate gene names: 71906192

Gene position: 614851-613940 (Counterclockwise)

Preceding gene: 71906196

Following gene: 71906191

Centisome position: 13.66

GC content: 66.56

Gene sequence:

>912_bases
ATGAAGATTTCATTCGACTTGTTACTCATCCTCGACGCCATCGACCGTCACGGTAGTTTCACCGCCGCCGCCACGGCGCT
GCATCGCGTCCCGTCGGCGCTATCGCACGCCATCGCCAAACTGGAAGGCGAGCTTGGCGCCACGCTGTTTCACCGCGAAG
GGCGGCGTGCCACGCTGAACGAGGCCGGACATACGCTACTCGAAGATGGCCGCCACCTGCTGCGCAGCGCCAGCGAGCTG
GAGCGCCGCGTCCAGCGCATCGCCCAGGGCTGGGAGGCCGAATTGCGCATTGCCATCGACACCATCATTCCGGTCGAGCG
CATCTACCCCATGCTGGAGCGCTTTTATGCCGCCGGTCACAGCACCCAGCTTCGCCTCAGCTACGAAGTGCTGGGCGGCA
CCTGGGATGCCCTGGCCACCGACCGGGCCGACCTGGTGATCGGCGCCAGCGGCGACATGCCGGCCCGCAGCGGCATCGCC
ACCCGCCTGCTGTGCCGGCACAGCCAGTTCGTCTTCGCGATTGCGCCAAGCCATCCGCTGGCCGCCTGGACGGAGCCGAT
TCCCAACAGCGAACTGCTGCGCCATCGCACCATCGCCATCGCCGACACCTCGCAGGAACTGGCCGCACGCACGATCGGCC
TGATCGAAGGCCAGGACATCCTGCGCGTTCCCGACATCCGTGCCAAGGCAGCCGCCCAGGTGGCCGGCCTCGGTATTGGT
CACCTGCCGCGCTGGCTGGCCGATCCGGAAATCGCGGCCGGACGCCTGGTCGAGAAAGCGCTGGCCGACCCACGCCATCC
GATGCCGCTGCACCTGGCCTGGCGCACTCGGCAAAGCGGCAAGGCGCTGAACTGGTTTCTCGATAGCCTGGCGGAAAAAG
CAAATATCGACCGGCTGACCCAGGGGCTATAA

Upstream 100 bases:

>100_bases
ATCCTTTGTGAATTGATTGTATGGATTAGTTTCGATATTAGGCCTAGAGTTCAGGCGTTAATAGCGAATTATTGCGAGGC
TATCGTTCAATTATTTTCAC

Downstream 100 bases:

>100_bases
ACACGGGCGATAAATCTGGACTTTCCTGCTATCCACGCCGCAGCAATAAAGTGTTATGGTGATTCCGTAAACACCAAATT
GGGTAATAGTGAAAATTTCG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MKISFDLLLILDAIDRHGSFTAAATALHRVPSALSHAIAKLEGELGATLFHREGRRATLNEAGHTLLEDGRHLLRSASEL
ERRVQRIAQGWEAELRIAIDTIIPVERIYPMLERFYAAGHSTQLRLSYEVLGGTWDALATDRADLVIGASGDMPARSGIA
TRLLCRHSQFVFAIAPSHPLAAWTEPIPNSELLRHRTIAIADTSQELAARTIGLIEGQDILRVPDIRAKAAAQVAGLGIG
HLPRWLADPEIAAGRLVEKALADPRHPMPLHLAWRTRQSGKALNWFLDSLAEKANIDRLTQGL

Sequences:

>Translated_303_residues
MKISFDLLLILDAIDRHGSFTAAATALHRVPSALSHAIAKLEGELGATLFHREGRRATLNEAGHTLLEDGRHLLRSASEL
ERRVQRIAQGWEAELRIAIDTIIPVERIYPMLERFYAAGHSTQLRLSYEVLGGTWDALATDRADLVIGASGDMPARSGIA
TRLLCRHSQFVFAIAPSHPLAAWTEPIPNSELLRHRTIAIADTSQELAARTIGLIEGQDILRVPDIRAKAAAQVAGLGIG
HLPRWLADPEIAAGRLVEKALADPRHPMPLHLAWRTRQSGKALNWFLDSLAEKANIDRLTQGL
>Mature_303_residues
MKISFDLLLILDAIDRHGSFTAAATALHRVPSALSHAIAKLEGELGATLFHREGRRATLNEAGHTLLEDGRHLLRSASEL
ERRVQRIAQGWEAELRIAIDTIIPVERIYPMLERFYAAGHSTQLRLSYEVLGGTWDALATDRADLVIGASGDMPARSGIA
TRLLCRHSQFVFAIAPSHPLAAWTEPIPNSELLRHRTIAIADTSQELAARTIGLIEGQDILRVPDIRAKAAAQVAGLGIG
HLPRWLADPEIAAGRLVEKALADPRHPMPLHLAWRTRQSGKALNWFLDSLAEKANIDRLTQGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082024, Length=296, Percent_Identity=38.1756756756757, Blast_Score=212, Evalue=2e-56,
Organism=Escherichia coli, GI1789492, Length=293, Percent_Identity=36.8600682593857, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI1787949, Length=291, Percent_Identity=34.3642611683849, Blast_Score=167, Evalue=9e-43,
Organism=Escherichia coli, GI1786508, Length=300, Percent_Identity=30.3333333333333, Blast_Score=144, Evalue=6e-36,
Organism=Escherichia coli, GI1786713, Length=275, Percent_Identity=32.7272727272727, Blast_Score=134, Evalue=7e-33,
Organism=Escherichia coli, GI1790262, Length=271, Percent_Identity=27.3062730627306, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI157672245, Length=169, Percent_Identity=31.9526627218935, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1786448, Length=265, Percent_Identity=28.6792452830189, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI145693193, Length=284, Percent_Identity=27.4647887323944, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33284; Mature: 33284

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISFDLLLILDAIDRHGSFTAAATALHRVPSALSHAIAKLEGELGATLFHREGRRATLN
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
EAGHTLLEDGRHLLRSASELERRVQRIAQGWEAELRIAIDTIIPVERIYPMLERFYAAGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHCCHHHHHHHHHHHHHCCC
STQLRLSYEVLGGTWDALATDRADLVIGASGDMPARSGIATRLLCRHSQFVFAIAPSHPL
CEEEEEEEEECCCCHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCC
AAWTEPIPNSELLRHRTIAIADTSQELAARTIGLIEGQDILRVPDIRAKAAAQVAGLGIG
HHHCCCCCCHHHHHHEEEEEECCHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHCCCCC
HLPRWLADPEIAAGRLVEKALADPRHPMPLHLAWRTRQSGKALNWFLDSLAEKANIDRLT
CCHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHH
QGL
HCC
>Mature Secondary Structure
MKISFDLLLILDAIDRHGSFTAAATALHRVPSALSHAIAKLEGELGATLFHREGRRATLN
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
EAGHTLLEDGRHLLRSASELERRVQRIAQGWEAELRIAIDTIIPVERIYPMLERFYAAGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHCCHHHHHHHHHHHHHCCC
STQLRLSYEVLGGTWDALATDRADLVIGASGDMPARSGIATRLLCRHSQFVFAIAPSHPL
CEEEEEEEEECCCCHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCC
AAWTEPIPNSELLRHRTIAIADTSQELAARTIGLIEGQDILRVPDIRAKAAAQVAGLGIG
HHHCCCCCCHHHHHHEEEEEECCHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHCCCCC
HLPRWLADPEIAAGRLVEKALADPRHPMPLHLAWRTRQSGKALNWFLDSLAEKANIDRLT
CCHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCHHHHH
QGL
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]