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The map label for this gene is 71906183

Identifier: 71906183

GI number: 71906183

Start: 600797

End: 601315

Strand: Reverse

Name: 71906183

Synonym: Daro_0543

Alternate gene names: NA

Gene position: 601315-600797 (Counterclockwise)

Preceding gene: 71906184

Following gene: 71906182

Centisome position: 13.36

GC content: 59.34

Gene sequence:

>519_bases
ATGCCGCTGTTGCGCCCACTGCTCGCCCTGATCCTTGCCGTTGCCCTTGCCGGCTGCGGCTTCCATCTGCGCGGCGTGGG
CAGCGGCAACCTGCCCTACAAGACGATGTACATCTCGCTGCCGGACACGGCTGACGTCAATATCTGGCTGCAGCGCTACA
TCAAGGCCAGCGGCAGTACCGAGATCGTCGATGATGCGAAGTCAGCCGAGGGAATCTTCCAGCAAGTGTCCGACACGCGC
CAAAAGACCATTCTCAGCGTCAATGCCCTGGGCCGGGTCCGCGAATACCGTCTGCAACTGGACTACCGCTTCCGTGTCGT
CAACCAGAAGGGGCAGATCCTGGTCCCGACCAACGAAATCAACCTGACCCGCGACATCACCTTCGACGACTCCAACATCC
TGGCCAAGGATCTGGAAGAAGGCCTGCTCTGGCGCGACATGAACAATGATCTGGTCAATCAGATCATGCGGCGGCTGAGC
GTCATCAAGCCGAAAAACCCCGACCTCGAAGAAGAATAG

Upstream 100 bases:

>100_bases
GGCCAACGAAGATGCCATCAAGTTCATGGAAGGCAAGCCGGCCAAGAAGGTCATCGTCGTACCGGGCCGCCTGGTCAACA
TCGTCGCTTAAGGAGCCGCC

Downstream 100 bases:

>100_bases
TGGTCTGCCCCACAGATAACGAAACATGAAAACTCGTCTTTGTCCCGTTGGCGTTGTTGCTCATCCTCGCAATAGCTTCG
GCTATTGCTGCGGTTCGCGC

Product: rare lipoprotein B

Products: NA

Alternate protein names: Lipoprotein; Lipoprotein B; Lipoprotein B Transmembrane; Lipoprotein B Transmembrane; Rare Lipoprotein B Family; Lipoprotein B Transmembrane Protein

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MPLLRPLLALILAVALAGCGFHLRGVGSGNLPYKTMYISLPDTADVNIWLQRYIKASGSTEIVDDAKSAEGIFQQVSDTR
QKTILSVNALGRVREYRLQLDYRFRVVNQKGQILVPTNEINLTRDITFDDSNILAKDLEEGLLWRDMNNDLVNQIMRRLS
VIKPKNPDLEEE

Sequences:

>Translated_172_residues
MPLLRPLLALILAVALAGCGFHLRGVGSGNLPYKTMYISLPDTADVNIWLQRYIKASGSTEIVDDAKSAEGIFQQVSDTR
QKTILSVNALGRVREYRLQLDYRFRVVNQKGQILVPTNEINLTRDITFDDSNILAKDLEEGLLWRDMNNDLVNQIMRRLS
VIKPKNPDLEEE
>Mature_171_residues
PLLRPLLALILAVALAGCGFHLRGVGSGNLPYKTMYISLPDTADVNIWLQRYIKASGSTEIVDDAKSAEGIFQQVSDTRQ
KTILSVNALGRVREYRLQLDYRFRVVNQKGQILVPTNEINLTRDITFDDSNILAKDLEEGLLWRDMNNDLVNQIMRRLSV
IKPKNPDLEEE

Specific function: Unknown

COG id: COG2980

COG function: function code M; Rare lipoprotein B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19485; Mature: 19354

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLRPLLALILAVALAGCGFHLRGVGSGNLPYKTMYISLPDTADVNIWLQRYIKASGST
CCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCC
EIVDDAKSAEGIFQQVSDTRQKTILSVNALGRVREYRLQLDYRFRVVNQKGQILVPTNEI
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCEEEECCCE
NLTRDITFDDSNILAKDLEEGLLWRDMNNDLVNQIMRRLSVIKPKNPDLEEE
EEEEEEEECCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PLLRPLLALILAVALAGCGFHLRGVGSGNLPYKTMYISLPDTADVNIWLQRYIKASGST
CHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCC
EIVDDAKSAEGIFQQVSDTRQKTILSVNALGRVREYRLQLDYRFRVVNQKGQILVPTNEI
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCCCEEEECCCE
NLTRDITFDDSNILAKDLEEGLLWRDMNNDLVNQIMRRLSVIKPKNPDLEEE
EEEEEEEECCCHHHHHHHHCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA