| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
Click here to switch to the map view.
The map label for this gene is 71906157
Identifier: 71906157
GI number: 71906157
Start: 578399
End: 579304
Strand: Reverse
Name: 71906157
Synonym: Daro_0517
Alternate gene names: NA
Gene position: 579304-578399 (Counterclockwise)
Preceding gene: 71906164
Following gene: 71906156
Centisome position: 12.87
GC content: 60.71
Gene sequence:
>906_bases ATGGCACTTCCGGCGCGTCCTTTAGTCATACAATCCCCGCATCCCCAGCCGACAAGAAGAACCATGAAATTCGAAGGTAC CGATAGCTACGTCGCCACCCGCGACCTGACCCTGGCGGTCAATGCCGCCGTCGCCCTGCAACGCCCGCTGCTCATCAAGG GCGAACCGGGCACCGGCAAGACGCTGCTCGCCGAGGAGGTGGCGCGGGCACTGAACATGCCGCTGTTCCAGTGGCACGTC AAATCGACCACCAAGGCACAGCAAGGTCTTTACGAATACGACGCCGTATCCCGACTGCGCGACTCGCAACTCGGCGATCC GCGCGTCGAGGACATCTCGCACTACATCGTGCATGGCGTGCTGTGGCAGGCGTTTGAATGCGATGAGCCTTCGGTGGTCC TGATCGACGAAATCGACAAGGCCGACATCGAATTCCCCAACGACCTGCTGCGCGAACTCGACCGCATGGAATTCCACTGC TACGAGCTGCACCGCACCATCAAGGCCAAACACCGGCCGCTGATCATCATCACATCGAACAACGAGAAGGAACTGCCCGA CGCCTTCCTGCGCCGCTGCTTCTTCCACTACATCAAATTCCCGGACAGGGAGACCATGCAGCGCATCGTCGGGGTGCATT TCCCGGTGCTCAAGCACGAGTTGCTGAAGGAAGCGCTGGAGGTGTTCTTCGACCTGCGCGAAGTGCCCGGCCTGAAGAAG AAGCCGTCGACCAGCGAATTGATCGACTGGCTGAAACTGCTGCTGGCCGAGGACATCCCGCCGGAAGCCTTGCGCGCCAA GGAAGCCAAGGATGCCATTCCGCCGCTGCATGGCGCGCTCCTGAAGAACGAGCAGGACGTGCATCTGTTCGAACGCCTGG CCTTCATGAGCCGCCGCAAACCGTAA
Upstream 100 bases:
>100_bases TCCCCCTTCTTAATCATCAATTTAATTTCACTATGGTGCTTAGCCTTGGCGATAAACGCCATATGCATAATACCCTTAGC AATAATCAGTACCACAACCA
Downstream 100 bases:
>100_bases ATGCTGGTCGATTTTTTCCTGCACCTGAAGTCGCGCCAGTTACCGGTGTCGACCAACGAGTTGCTGGCCCTACTCGAAGC CCTGGAGGCACGGCTGGTGA
Product: AAA ATPase, central region:ATPase
Products: NA
Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; MoxR-Like ATPase; ATPase Central Domain-Containing Protein; AAA Family ATPase; ATPase AAA Family Protein; ATPase-Like Protein; AAA ATPase; AAA_5 ATPase; ATPase Associated With Various Cellular Activities; Carbon Monoxide Dehydrogenase D Protein; ATPase Aaa Family; ATPase Protein; Aaa ATPase; Oxidoreductase; MoxR Family ATPase; AAA ATPase Central RegionATPase; ATP-Dependent Protease LA Protein; MoxR-Like ATPases; CoxD-Like Protein; ATP-Dependent Protease Subunit; ATPase Associated With Various Cellular; ClpA/ClpB Family Protein; AAA ATPase Family Protein
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MALPARPLVIQSPHPQPTRRTMKFEGTDSYVATRDLTLAVNAAVALQRPLLIKGEPGTGKTLLAEEVARALNMPLFQWHV KSTTKAQQGLYEYDAVSRLRDSQLGDPRVEDISHYIVHGVLWQAFECDEPSVVLIDEIDKADIEFPNDLLRELDRMEFHC YELHRTIKAKHRPLIIITSNNEKELPDAFLRRCFFHYIKFPDRETMQRIVGVHFPVLKHELLKEALEVFFDLREVPGLKK KPSTSELIDWLKLLLAEDIPPEALRAKEAKDAIPPLHGALLKNEQDVHLFERLAFMSRRKP
Sequences:
>Translated_301_residues MALPARPLVIQSPHPQPTRRTMKFEGTDSYVATRDLTLAVNAAVALQRPLLIKGEPGTGKTLLAEEVARALNMPLFQWHV KSTTKAQQGLYEYDAVSRLRDSQLGDPRVEDISHYIVHGVLWQAFECDEPSVVLIDEIDKADIEFPNDLLRELDRMEFHC YELHRTIKAKHRPLIIITSNNEKELPDAFLRRCFFHYIKFPDRETMQRIVGVHFPVLKHELLKEALEVFFDLREVPGLKK KPSTSELIDWLKLLLAEDIPPEALRAKEAKDAIPPLHGALLKNEQDVHLFERLAFMSRRKP >Mature_300_residues ALPARPLVIQSPHPQPTRRTMKFEGTDSYVATRDLTLAVNAAVALQRPLLIKGEPGTGKTLLAEEVARALNMPLFQWHVK STTKAQQGLYEYDAVSRLRDSQLGDPRVEDISHYIVHGVLWQAFECDEPSVVLIDEIDKADIEFPNDLLRELDRMEFHCY ELHRTIKAKHRPLIIITSNNEKELPDAFLRRCFFHYIKFPDRETMQRIVGVHFPVLKHELLKEALEVFFDLREVPGLKKK PSTSELIDWLKLLLAEDIPPEALRAKEAKDAIPPLHGALLKNEQDVHLFERLAFMSRRKP
Specific function: Unknown
COG id: COG0714
COG function: function code R; MoxR-like ATPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34675; Mature: 34543
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPARPLVIQSPHPQPTRRTMKFEGTDSYVATRDLTLAVNAAVALQRPLLIKGEPGTGK CCCCCCCEEEECCCCCCCHHEEEECCCCCEEEECCCCEEHHHHHHHCCCEEEECCCCCCH TLLAEEVARALNMPLFQWHVKSTTKAQQGLYEYDAVSRLRDSQLGDPRVEDISHYIVHGV HHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LWQAFECDEPSVVLIDEIDKADIEFPNDLLRELDRMEFHCYELHRTIKAKHRPLIIITSN HHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC NEKELPDAFLRRCFFHYIKFPDRETMQRIVGVHFPVLKHELLKEALEVFFDLREVPGLKK CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KPSTSELIDWLKLLLAEDIPPEALRAKEAKDAIPPLHGALLKNEQDVHLFERLAFMSRRK CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCC P C >Mature Secondary Structure ALPARPLVIQSPHPQPTRRTMKFEGTDSYVATRDLTLAVNAAVALQRPLLIKGEPGTGK CCCCCCEEEECCCCCCCHHEEEECCCCCEEEECCCCEEHHHHHHHCCCEEEECCCCCCH TLLAEEVARALNMPLFQWHVKSTTKAQQGLYEYDAVSRLRDSQLGDPRVEDISHYIVHGV HHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LWQAFECDEPSVVLIDEIDKADIEFPNDLLRELDRMEFHCYELHRTIKAKHRPLIIITSN HHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC NEKELPDAFLRRCFFHYIKFPDRETMQRIVGVHFPVLKHELLKEALEVFFDLREVPGLKK CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KPSTSELIDWLKLLLAEDIPPEALRAKEAKDAIPPLHGALLKNEQDVHLFERLAFMSRRK CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHCCC P C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA