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The map label for this gene is yraP [C]

Identifier: 71906140

GI number: 71906140

Start: 561865

End: 562533

Strand: Reverse

Name: yraP [C]

Synonym: Daro_0500

Alternate gene names: 71906140

Gene position: 562533-561865 (Counterclockwise)

Preceding gene: 71906141

Following gene: 71906139

Centisome position: 12.5

GC content: 60.69

Gene sequence:

>669_bases
ATGATGCAAAAAGCCAAACTCAGCCTGGCTGCCCTGCTGATGATTGCCGCCCTGCCCGCCTTGCAGGGCTGCGTTGAAGC
CGCCCTGCTCGGCACTGCGGCCGCCGCCAGCGTGATGTCAGCCCATGACCGCCGCTCGACCGGCACCCAGACTGACGACG
AGACGATGGAATGGAAGTCCAACAATCACGTGCCGGCACAGTACAAGGACCATTCGCACGTCAATTTCACTGCCTTCAAT
CGCCGCGTGCTGATCACCGGCGAAGTACCGAATGAAGAAGCCAAGTCGTCGATTGAAAGCGAAATCCGCAAGATCGAGGG
CGTTCGTGACGTTATTAACGAACTGGGCATTGGTCCGGCGACGCCGCTGGGCAGCCGCAGCAACGACAGCTTCATCACGT
CCAAGGTCAAGGCTCGCCTGGTTGACACCAACCAACTGTCCGCCAACCACATCAAGGTGCTGAGCGAGCGCGGCATTGTC
TACCTGATGGGCATCGTCAACGAGCGAGAGTCCAAGGTGGCCATCGCCGTCGCCCGCACTACGGCCGGCGTCGTCAAGGT
CGTCAATGTGATGGAAATCGTCAGCGACGATGAAACCCGCCGCCTCGACAATCAAGTCCTCGGTGCCCGTTCGGCGCCAC
CGCAAAGCGCCCCGGTCGAGAATCGCTGA

Upstream 100 bases:

>100_bases
TCTGCGTACCGGCCGACCGGACGGCGCGCATTCAGGAAACCCACCTGCTCGTCATCCATTGCCTGTGCGATGGCATCGAT
GCGCTTTTACTGGGAGTCGA

Downstream 100 bases:

>100_bases
CCCCCTCGCCGGGCAAGGCCCGACAGGAGTAAGCTGACAGGGCGTGCCGCATGGCACGCCCTGATTGCATTTGGGGGGCA
TCATGAATCTCGAAAAAGTC

Product: transport-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MMQKAKLSLAALLMIAALPALQGCVEAALLGTAAAASVMSAHDRRSTGTQTDDETMEWKSNNHVPAQYKDHSHVNFTAFN
RRVLITGEVPNEEAKSSIESEIRKIEGVRDVINELGIGPATPLGSRSNDSFITSKVKARLVDTNQLSANHIKVLSERGIV
YLMGIVNERESKVAIAVARTTAGVVKVVNVMEIVSDDETRRLDNQVLGARSAPPQSAPVENR

Sequences:

>Translated_222_residues
MMQKAKLSLAALLMIAALPALQGCVEAALLGTAAAASVMSAHDRRSTGTQTDDETMEWKSNNHVPAQYKDHSHVNFTAFN
RRVLITGEVPNEEAKSSIESEIRKIEGVRDVINELGIGPATPLGSRSNDSFITSKVKARLVDTNQLSANHIKVLSERGIV
YLMGIVNERESKVAIAVARTTAGVVKVVNVMEIVSDDETRRLDNQVLGARSAPPQSAPVENR
>Mature_222_residues
MMQKAKLSLAALLMIAALPALQGCVEAALLGTAAAASVMSAHDRRSTGTQTDDETMEWKSNNHVPAQYKDHSHVNFTAFN
RRVLITGEVPNEEAKSSIESEIRKIEGVRDVINELGIGPATPLGSRSNDSFITSKVKARLVDTNQLSANHIKVLSERGIV
YLMGIVNERESKVAIAVARTTAGVVKVVNVMEIVSDDETRRLDNQVLGARSAPPQSAPVENR

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains [H]

Homologues:

Organism=Escherichia coli, GI1789540, Length=190, Percent_Identity=37.3684210526316, Blast_Score=109, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007055
- InterPro:   IPR014004 [H]

Pfam domain/function: PF04972 BON [H]

EC number: NA

Molecular weight: Translated: 23983; Mature: 23983

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQKAKLSLAALLMIAALPALQGCVEAALLGTAAAASVMSAHDRRSTGTQTDDETMEWKS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCC
NNHVPAQYKDHSHVNFTAFNRRVLITGEVPNEEAKSSIESEIRKIEGVRDVINELGIGPA
CCCCCCCCCCCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TPLGSRSNDSFITSKVKARLVDTNQLSANHIKVLSERGIVYLMGIVNERESKVAIAVART
CCCCCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEHH
TAGVVKVVNVMEIVSDDETRRLDNQVLGARSAPPQSAPVENR
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMQKAKLSLAALLMIAALPALQGCVEAALLGTAAAASVMSAHDRRSTGTQTDDETMEWKS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCC
NNHVPAQYKDHSHVNFTAFNRRVLITGEVPNEEAKSSIESEIRKIEGVRDVINELGIGPA
CCCCCCCCCCCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
TPLGSRSNDSFITSKVKARLVDTNQLSANHIKVLSERGIVYLMGIVNERESKVAIAVART
CCCCCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEHH
TAGVVKVVNVMEIVSDDETRRLDNQVLGARSAPPQSAPVENR
HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]