| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is yigI [H]
Identifier: 71906075
GI number: 71906075
Start: 478196
End: 478687
Strand: Reverse
Name: yigI [H]
Synonym: Daro_0435
Alternate gene names: 71906075
Gene position: 478687-478196 (Counterclockwise)
Preceding gene: 71906076
Following gene: 71906063
Centisome position: 10.63
GC content: 61.79
Gene sequence:
>492_bases ATGACCCCTACGCCCCCGCAAGCCCGCCGCTCCACTGAAGAGCAATCCCGCCTCGAAGCCACGCTGCGCGATGTCTTCGA GCACAAGCTCTGCTTCAACGAACTACTCGGTTTCAAGGTCGAGTCACTCGATCCGGCTGCGCCGAAAATCAGCTTCGCCA TGCGCCAGGATTTGATCGGCCACTTCCTGCATGGCCGGCTACACGGCGGCGTGATCGCTACCGTGCTCGACACCGTTGGC GGCCTGGCCGCCACGGTCGCCATTGCCGAGAAATTCAGTGGCGAAACGACAGAACAGGTCGGTCATCGCTTTGGCCGCAT CGGTACCATCGACCTGCGCACCGATTACCTGCATCAGGGCATCGGCAAAAAATTTACGGCCACCGGCCGGGTAACCCGAC TCGGCGGCCGTATCGCCTCCGTGCAAATGACGCTGGAAAACGAGACCGGTCAGCTCATCGCCACCGGCTGCGCCTCCTAC GTGATCAGCTAG
Upstream 100 bases:
>100_bases CAAGATGGCGACCTGATTGAAGCCGCCAGCCATCGCCTGGAATTCCATTTGGGCCGACCGCCCACCAAACGCTAGCCGAC TCTGCCGCCCCGTCCAGACA
Downstream 100 bases:
>100_bases AGAATCGGCACCCCCTGGTGCTCGCCGCGCTCAAAGACCACATTGGCGCGGCCGACGATCAACGGATCCAGGTTGCCGAT GCGATCCGTATCCTTGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MTPTPPQARRSTEEQSRLEATLRDVFEHKLCFNELLGFKVESLDPAAPKISFAMRQDLIGHFLHGRLHGGVIATVLDTVG GLAATVAIAEKFSGETTEQVGHRFGRIGTIDLRTDYLHQGIGKKFTATGRVTRLGGRIASVQMTLENETGQLIATGCASY VIS
Sequences:
>Translated_163_residues MTPTPPQARRSTEEQSRLEATLRDVFEHKLCFNELLGFKVESLDPAAPKISFAMRQDLIGHFLHGRLHGGVIATVLDTVG GLAATVAIAEKFSGETTEQVGHRFGRIGTIDLRTDYLHQGIGKKFTATGRVTRLGGRIASVQMTLENETGQLIATGCASY VIS >Mature_162_residues TPTPPQARRSTEEQSRLEATLRDVFEHKLCFNELLGFKVESLDPAAPKISFAMRQDLIGHFLHGRLHGGVIATVLDTVGG LAATVAIAEKFSGETTEQVGHRFGRIGTIDLRTDYLHQGIGKKFTATGRVTRLGGRIASVQMTLENETGQLIATGCASYV IS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082336, Length=139, Percent_Identity=33.0935251798561, Blast_Score=96, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003736 - InterPro: IPR006683 [H]
Pfam domain/function: PF03061 4HBT [H]
EC number: NA
Molecular weight: Translated: 17680; Mature: 17549
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTPPQARRSTEEQSRLEATLRDVFEHKLCFNELLGFKVESLDPAAPKISFAMRQDLIG CCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH HFLHGRLHGGVIATVLDTVGGLAATVAIAEKFSGETTEQVGHRFGRIGTIDLRTDYLHQG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECHHHHHHHC IGKKFTATGRVTRLGGRIASVQMTLENETGQLIATGCASYVIS CCCCEECCCCHHHHCCEEEEEEEEEECCCCCCHHHHHHHHHCC >Mature Secondary Structure TPTPPQARRSTEEQSRLEATLRDVFEHKLCFNELLGFKVESLDPAAPKISFAMRQDLIG CCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH HFLHGRLHGGVIATVLDTVGGLAATVAIAEKFSGETTEQVGHRFGRIGTIDLRTDYLHQG HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECHHHHHHHC IGKKFTATGRVTRLGGRIASVQMTLENETGQLIATGCASYVIS CCCCEECCCCHHHHCCEEEEEEEEEECCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]