| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906062
Identifier: 71906062
GI number: 71906062
Start: 463744
End: 464439
Strand: Reverse
Name: 71906062
Synonym: Daro_0422
Alternate gene names: NA
Gene position: 464439-463744 (Counterclockwise)
Preceding gene: 71906063
Following gene: 71906061
Centisome position: 10.32
GC content: 65.09
Gene sequence:
>696_bases ATGAGTGAGCGCTCGCCCTTTGTCGCCGATTTCCTGAACGAAAGCGGCCTGAACCGCCAGTTCGTCTTCGACCTGAGCGC TCTACCCGCTGACATCGCCGACAAGTTGGCGCCGCAAGCCGGCGAGCGCCAGTTGATCCTGTTTGGCCATGGCGGACGAC TGCTGTGGGAATGCGTCAAGGCATCCGGCCTGACTGGCGAAAACCCCATAGACGACTACAGCATCCGCACTGTCGAACGC TGGTTTGCCGAGCAGGTGCCCGGCCACCGCTACCGCATCCTGTTTCCCGGCGAGCAGCCGATCGGCCTGCAGGCCTTGGG CAAGCTGGCCGGATGGCACCATCCGTCGCCGATCATGGTCGGGGTCGACCGTGAATGGGGTAGCTGGTACGCCTATCGGG CCGCGGTCATTGCCGACACCGATTTTGCACCATCGCCGGCCGAGGAGGCACGCAGCCCGTGCCCGAGCTGTGTAACCAAA CCCTGCGTTGCCGCCTGCCCGGCCGATGCCCTGCACGGCGACCAGTTCGATCTCGAGCGCTGCAGCCGCTACCGCCTGCA GCCGGAATCAGCGTGCGCCCACGGCTGCCTGGCCCGTCAGGCCTGCCCGGTGGGCAGCCAGCACCGTTATGAAGACGCCC AGATCATGCATAGCTATTCGCGCTCGCTGGCCGTAATCCGTCAGTACTACCGCTGA
Upstream 100 bases:
>100_bases ATCAACCACCCGAAGGCCCAGGCTGGCAGCGCGGCCATCGACGCCCTGCTCGTCTGGGTGGCCCAGCGCCGGGTTGGCGA GAAAACACCGGTGCTGGAAA
Downstream 100 bases:
>100_bases CAGGTTCCAGAATTGCCTCCTGCCATGACAACACCTGAAAGCCATCGCCACAACCTGTTCGAAGACGCCCAGGCCCTGCT CGTCGCCCCCTTGCTGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MSERSPFVADFLNESGLNRQFVFDLSALPADIADKLAPQAGERQLILFGHGGRLLWECVKASGLTGENPIDDYSIRTVER WFAEQVPGHRYRILFPGEQPIGLQALGKLAGWHHPSPIMVGVDREWGSWYAYRAAVIADTDFAPSPAEEARSPCPSCVTK PCVAACPADALHGDQFDLERCSRYRLQPESACAHGCLARQACPVGSQHRYEDAQIMHSYSRSLAVIRQYYR
Sequences:
>Translated_231_residues MSERSPFVADFLNESGLNRQFVFDLSALPADIADKLAPQAGERQLILFGHGGRLLWECVKASGLTGENPIDDYSIRTVER WFAEQVPGHRYRILFPGEQPIGLQALGKLAGWHHPSPIMVGVDREWGSWYAYRAAVIADTDFAPSPAEEARSPCPSCVTK PCVAACPADALHGDQFDLERCSRYRLQPESACAHGCLARQACPVGSQHRYEDAQIMHSYSRSLAVIRQYYR >Mature_230_residues SERSPFVADFLNESGLNRQFVFDLSALPADIADKLAPQAGERQLILFGHGGRLLWECVKASGLTGENPIDDYSIRTVERW FAEQVPGHRYRILFPGEQPIGLQALGKLAGWHHPSPIMVGVDREWGSWYAYRAAVIADTDFAPSPAEEARSPCPSCVTKP CVAACPADALHGDQFDLERCSRYRLQPESACAHGCLARQACPVGSQHRYEDAQIMHSYSRSLAVIRQYYR
Specific function: Unknown
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25721; Mature: 25590
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERSPFVADFLNESGLNRQFVFDLSALPADIADKLAPQAGERQLILFGHGGRLLWECVK CCCCCCHHHHHHHCCCCCEEEEEECHHCCHHHHHHHCCCCCCCEEEEEECCCHHHHHHHH ASGLTGENPIDDYSIRTVERWFAEQVPGHRYRILFPGEQPIGLQALGKLAGWHHPSPIMV HCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCEEE GVDREWGSWYAYRAAVIADTDFAPSPAEEARSPCPSCVTKPCVAACPADALHGDQFDLER EECCCCCCEEHHEEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHCCCHHHCCCCCCHHH CSRYRLQPESACAHGCLARQACPVGSQHRYEDAQIMHSYSRSLAVIRQYYR HHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SERSPFVADFLNESGLNRQFVFDLSALPADIADKLAPQAGERQLILFGHGGRLLWECVK CCCCCHHHHHHHCCCCCEEEEEECHHCCHHHHHHHCCCCCCCEEEEEECCCHHHHHHHH ASGLTGENPIDDYSIRTVERWFAEQVPGHRYRILFPGEQPIGLQALGKLAGWHHPSPIMV HCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCEEE GVDREWGSWYAYRAAVIADTDFAPSPAEEARSPCPSCVTKPCVAACPADALHGDQFDLER EECCCCCCEEHHEEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHCCCHHHCCCCCCHHH CSRYRLQPESACAHGCLARQACPVGSQHRYEDAQIMHSYSRSLAVIRQYYR HHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA