| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71905911
Identifier: 71905911
GI number: 71905911
Start: 314158
End: 315465
Strand: Reverse
Name: 71905911
Synonym: Daro_0269
Alternate gene names: NA
Gene position: 315465-314158 (Counterclockwise)
Preceding gene: 71905921
Following gene: 71905910
Centisome position: 7.01
GC content: 57.26
Gene sequence:
>1308_bases ATGCCGGTCATTGCCAAGTTGCGGTTCCTGGTCAACCAGACGGCTCGCAAGCTGTTTTCAATGCTGCCGCAGAAGAGCCG GCATAACGTTTATCGTTCGCTCGTCGACTGCAACCCGGACCCTAACAAGCGCCTGGTTCTGAAGATTGCCGAAAGCAAGG AAGAACTGGAAGCCTGCTTCAAGCTGTTGCATGACGCCTATGTCAGCAGCGGCTTCATGACGCCGGACCCGTCGGGCATG CGGGTCACCATTTACCACGCGCTGCCGACAACAACGACCCTCTGCGCCAAGTACGACGACCAGGTCGTCGGCACCTTGTC TCTGATCCGCGAAAGCGCCATCGGTTTCCCGCTACAGCGCATTTTCGACCTGACTGGGGTCCGCGAAAAGGAAGGCCAGA TCGCCGAAGTTTCGGCGCTTGCCGTGCATCCGCGCTTCCGGCGAACCGGCGGGACCATCCTCTTCCCGTTGATGAAGTTC ATGTACGAGTACTGCACGACCTTCTTTGACACCCGCCATCTGGTCATTGCGGTCAATCCGCGCCATATCGAGATGTACGA GTCGCTGCTCTTCTTCAAGCGACTGACCGCCAACGTCGTCGAGAACTATGATTTCGTCAATGGCGCCCCCGCTGTTGGCG CCACGCTCGATCTCAAGCACGCGCCCGAAATCCTGCGCAAAGCCTACGCCGGCAAAGCGCCGAACCGCAATCTTTACCAC TACTTCCTCGAAACCAAGCTGGCCAACATCCAGATCCCGCACCGTCGCTTCTTCACCACGAACGACCCCGTGCTGACGCC CGAACTGATCGATTACTTCTTCAACAAGAAGACCTCCGTCTTTGCCGACCTGAGCGATCGCAAGAAGGCCTTGTTGCATC TGATCTACGACCTGCCGGAATATCGCAAGATACTTCCCGCCATTCCGGACAAGGGCGAAGGGGTGGTGCAGCAGATTCGC CAACACCGCCGTTTCTCGGTCAAATGCCCGGCCAAGCTTGCCAACTCAACGGCCTTTATCGACAAACCCATTTCGGTCGA GGTTAACGAAGTCTCGCGTTATGGTTTCCGTGCCAGGGTCGCCCAGCAAATCCCGGCCGAAGTATGGCTTAATGCCACGG TTCAACTTGGCCTTAACGAGATTTCCCGACTGACCGTGCAGGCCGTGCAGGAAACGGATGTCGATGACCAGCATTACTGC GGTTTCCGTATCGGCGAACCAGATCTGGTTTGGCGAAAATTCGTCACCGCGCTCTATGAAGGGCATACTCACACGGATCT CGACCAAGCCACCCGATTCCTCCCGTGA
Upstream 100 bases:
>100_bases TGGGGATAAAAGGCTTCCGTCGATTGTCCGGAGGCGCCGAATACATGTCAATAATAAGGTGCTATGATGAATTCGTAGTC ATTTTCGATAGGGCGCCTTG
Downstream 100 bases:
>100_bases CCAGAAAAGCCCTCCCCGAAGCACTGCAGCAAGCCCTCCAGCAACAATTCCAGCAACGTTTTTCGCAAGGCGAATCGACC CGCCTGCAGCATGGCCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MPVIAKLRFLVNQTARKLFSMLPQKSRHNVYRSLVDCNPDPNKRLVLKIAESKEELEACFKLLHDAYVSSGFMTPDPSGM RVTIYHALPTTTTLCAKYDDQVVGTLSLIRESAIGFPLQRIFDLTGVREKEGQIAEVSALAVHPRFRRTGGTILFPLMKF MYEYCTTFFDTRHLVIAVNPRHIEMYESLLFFKRLTANVVENYDFVNGAPAVGATLDLKHAPEILRKAYAGKAPNRNLYH YFLETKLANIQIPHRRFFTTNDPVLTPELIDYFFNKKTSVFADLSDRKKALLHLIYDLPEYRKILPAIPDKGEGVVQQIR QHRRFSVKCPAKLANSTAFIDKPISVEVNEVSRYGFRARVAQQIPAEVWLNATVQLGLNEISRLTVQAVQETDVDDQHYC GFRIGEPDLVWRKFVTALYEGHTHTDLDQATRFLP
Sequences:
>Translated_435_residues MPVIAKLRFLVNQTARKLFSMLPQKSRHNVYRSLVDCNPDPNKRLVLKIAESKEELEACFKLLHDAYVSSGFMTPDPSGM RVTIYHALPTTTTLCAKYDDQVVGTLSLIRESAIGFPLQRIFDLTGVREKEGQIAEVSALAVHPRFRRTGGTILFPLMKF MYEYCTTFFDTRHLVIAVNPRHIEMYESLLFFKRLTANVVENYDFVNGAPAVGATLDLKHAPEILRKAYAGKAPNRNLYH YFLETKLANIQIPHRRFFTTNDPVLTPELIDYFFNKKTSVFADLSDRKKALLHLIYDLPEYRKILPAIPDKGEGVVQQIR QHRRFSVKCPAKLANSTAFIDKPISVEVNEVSRYGFRARVAQQIPAEVWLNATVQLGLNEISRLTVQAVQETDVDDQHYC GFRIGEPDLVWRKFVTALYEGHTHTDLDQATRFLP >Mature_434_residues PVIAKLRFLVNQTARKLFSMLPQKSRHNVYRSLVDCNPDPNKRLVLKIAESKEELEACFKLLHDAYVSSGFMTPDPSGMR VTIYHALPTTTTLCAKYDDQVVGTLSLIRESAIGFPLQRIFDLTGVREKEGQIAEVSALAVHPRFRRTGGTILFPLMKFM YEYCTTFFDTRHLVIAVNPRHIEMYESLLFFKRLTANVVENYDFVNGAPAVGATLDLKHAPEILRKAYAGKAPNRNLYHY FLETKLANIQIPHRRFFTTNDPVLTPELIDYFFNKKTSVFADLSDRKKALLHLIYDLPEYRKILPAIPDKGEGVVQQIRQ HRRFSVKCPAKLANSTAFIDKPISVEVNEVSRYGFRARVAQQIPAEVWLNATVQLGLNEISRLTVQAVQETDVDDQHYCG FRIGEPDLVWRKFVTALYEGHTHTDLDQATRFLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49780; Mature: 49649
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVIAKLRFLVNQTARKLFSMLPQKSRHNVYRSLVDCNPDPNKRLVLKIAESKEELEACF CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHH KLLHDAYVSSGFMTPDPSGMRVTIYHALPTTTTLCAKYDDQVVGTLSLIRESAIGFPLQR HHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHCCCCHHH IFDLTGVREKEGQIAEVSALAVHPRFRRTGGTILFPLMKFMYEYCTTFFDTRHLVIAVNP HHHHCCCCCCCCCEEEEHHEEECCHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECC RHIEMYESLLFFKRLTANVVENYDFVNGAPAVGATLDLKHAPEILRKAYAGKAPNRNLYH HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCHHH YFLETKLANIQIPHRRFFTTNDPVLTPELIDYFFNKKTSVFADLSDRKKALLHLIYDLPE HEEHHHHHCEECCCCEEECCCCCCCCHHHHHHHHCCCCCEEECHHHHHHHHHHHHHCCHH YRKILPAIPDKGEGVVQQIRQHRRFSVKCPAKLANSTAFIDKPISVEVNEVSRYGFRARV HHHHHCCCCCCCCHHHHHHHHHCCEEEECCHHHCCCCEEECCCCEEEHHHHHHHHHHHHH AQQIPAEVWLNATVQLGLNEISRLTVQAVQETDVDDQHYCGFRIGEPDLVWRKFVTALYE HHHCCHHHHHHHHEEECHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHC GHTHTDLDQATRFLP CCCCCCHHHHHHCCC >Mature Secondary Structure PVIAKLRFLVNQTARKLFSMLPQKSRHNVYRSLVDCNPDPNKRLVLKIAESKEELEACF CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHH KLLHDAYVSSGFMTPDPSGMRVTIYHALPTTTTLCAKYDDQVVGTLSLIRESAIGFPLQR HHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHCCCCHHH IFDLTGVREKEGQIAEVSALAVHPRFRRTGGTILFPLMKFMYEYCTTFFDTRHLVIAVNP HHHHCCCCCCCCCEEEEHHEEECCHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECC RHIEMYESLLFFKRLTANVVENYDFVNGAPAVGATLDLKHAPEILRKAYAGKAPNRNLYH HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCHHH YFLETKLANIQIPHRRFFTTNDPVLTPELIDYFFNKKTSVFADLSDRKKALLHLIYDLPE HEEHHHHHCEECCCCEEECCCCCCCCHHHHHHHHCCCCCEEECHHHHHHHHHHHHHCCHH YRKILPAIPDKGEGVVQQIRQHRRFSVKCPAKLANSTAFIDKPISVEVNEVSRYGFRARV HHHHHCCCCCCCCHHHHHHHHHCCEEEECCHHHCCCCEEECCCCEEEHHHHHHHHHHHHH AQQIPAEVWLNATVQLGLNEISRLTVQAVQETDVDDQHYCGFRIGEPDLVWRKFVTALYE HHHCCHHHHHHHHEEECHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHC GHTHTDLDQATRFLP CCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA