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The map label for this gene is qmcA [H]

Identifier: 71905902

GI number: 71905902

Start: 302832

End: 303692

Strand: Reverse

Name: qmcA [H]

Synonym: Daro_0260

Alternate gene names: 71905902

Gene position: 303692-302832 (Counterclockwise)

Preceding gene: 71905903

Following gene: 71905901

Centisome position: 6.75

GC content: 60.86

Gene sequence:

>861_bases
ATGGATATGAATGCAGGATTTGTCGTCACACTGGCCATTCTGGTCTTTGTCGTCGTCACCATCGCCAAGGGCGTGCGCAT
CGTGCCGCAGGGCGAGGAGTGGATCGTCGAGCGGCTGGGCAAGTACCACGGCACGCTGAAACCGGGCCTCAACATCGTCA
TTCCCTACCTTGACAAGGTGTCTTACCAATTGGTGACCAAGGACATCATCCTCGACGTCCAGGAGCAGGAGGTCATTACC
CGCGACAACGCGGTGATCCTGACCAATGCCATTGCCTTCATCAAGGTCACCGACCCGGTCAAGGCGGTCTATGGCGTCAC
CGACTTCTCCGAAGCCATCCGCAACCTGATCATGACCACGCTGCGCTCGATTGTGGGCGAAATGGAACTCGACGAAGCGC
TGTCGTCGCGCGACAAGATCAAGGCCCGGCTGCGCGAAAGCATCGCCGACGAAGCGGTCGACTGGGGCCTGACCGTCAAA
TCGGTCGAAATCCAGGACATCAAGCCCTCGCAATCGATGCAGAAAGCCATGGAAATGCAGGCGGCGGCCGAGCGCGAGCG
CAAAGCCGTCGTCACCCGCTCGGAGGGTGCCAAGCAGTCGGCCATTCTCGAAGCCGAAGCCCGCCTCGAATCGGCCAAGC
GCGACGCCAACGCCCAGGTCATGCTGGCCGAGGCTTCAGCCGAGGCGATCCGGCGCATCACGGCCGCCATCGGCGACCAG
ACCGGCCCGATGTCCTACATGCTCGGCGAAAAATACATCGCGGCACTGGAACGCATGGGCGAAAAAGACAACGCCAAGCT
TGTCGTCCTGCCGGCTGACCTTCAGGAGGCAGTACGCGGACTGTTTGGACGAAAAGGCTGA

Upstream 100 bases:

>100_bases
TTGCCTGTCGGACACCGCCATCGCGGCGGGCGAGCGGGTCAAGGTGACGGCCGTCGAGGGTAGTTTCGTCAAGGTCAGCA
AGGCTTAGAGGGATAGCAAA

Downstream 100 bases:

>100_bases
TCCGGAAGCCGGGCATGAAAGGCCGGACCCGTCGCACTGAGCGATCACCGGTTCACCCGGGCCTACATCCGCTTTCAATA
CCTATACAAAACTTTGCATA

Product: SPFH domain-containing protein/band 7 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MDMNAGFVVTLAILVFVVVTIAKGVRIVPQGEEWIVERLGKYHGTLKPGLNIVIPYLDKVSYQLVTKDIILDVQEQEVIT
RDNAVILTNAIAFIKVTDPVKAVYGVTDFSEAIRNLIMTTLRSIVGEMELDEALSSRDKIKARLRESIADEAVDWGLTVK
SVEIQDIKPSQSMQKAMEMQAAAERERKAVVTRSEGAKQSAILEAEARLESAKRDANAQVMLAEASAEAIRRITAAIGDQ
TGPMSYMLGEKYIAALERMGEKDNAKLVVLPADLQEAVRGLFGRKG

Sequences:

>Translated_286_residues
MDMNAGFVVTLAILVFVVVTIAKGVRIVPQGEEWIVERLGKYHGTLKPGLNIVIPYLDKVSYQLVTKDIILDVQEQEVIT
RDNAVILTNAIAFIKVTDPVKAVYGVTDFSEAIRNLIMTTLRSIVGEMELDEALSSRDKIKARLRESIADEAVDWGLTVK
SVEIQDIKPSQSMQKAMEMQAAAERERKAVVTRSEGAKQSAILEAEARLESAKRDANAQVMLAEASAEAIRRITAAIGDQ
TGPMSYMLGEKYIAALERMGEKDNAKLVVLPADLQEAVRGLFGRKG
>Mature_286_residues
MDMNAGFVVTLAILVFVVVTIAKGVRIVPQGEEWIVERLGKYHGTLKPGLNIVIPYLDKVSYQLVTKDIILDVQEQEVIT
RDNAVILTNAIAFIKVTDPVKAVYGVTDFSEAIRNLIMTTLRSIVGEMELDEALSSRDKIKARLRESIADEAVDWGLTVK
SVEIQDIKPSQSMQKAMEMQAAAERERKAVVTRSEGAKQSAILEAEARLESAKRDANAQVMLAEASAEAIRRITAAIGDQ
TGPMSYMLGEKYIAALERMGEKDNAKLVVLPADLQEAVRGLFGRKG

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=266, Percent_Identity=33.4586466165414, Blast_Score=159, Evalue=3e-39,
Organism=Homo sapiens, GI38016911, Length=176, Percent_Identity=28.9772727272727, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI221316744, Length=274, Percent_Identity=24.4525547445255, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI21686995, Length=274, Percent_Identity=24.4525547445255, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI7657615, Length=191, Percent_Identity=26.7015706806283, Blast_Score=71, Evalue=1e-12,
Organism=Escherichia coli, GI1786697, Length=280, Percent_Identity=40.3571428571429, Blast_Score=208, Evalue=3e-55,
Organism=Escherichia coli, GI1790616, Length=224, Percent_Identity=27.6785714285714, Blast_Score=65, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI32564147, Length=272, Percent_Identity=35.2941176470588, Blast_Score=162, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17569493, Length=194, Percent_Identity=31.4432989690722, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI193209764, Length=194, Percent_Identity=31.4432989690722, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17569497, Length=197, Percent_Identity=29.4416243654822, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17570459, Length=203, Percent_Identity=30.5418719211823, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71989948, Length=157, Percent_Identity=35.031847133758, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI71989955, Length=157, Percent_Identity=35.031847133758, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17569499, Length=174, Percent_Identity=29.3103448275862, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17542664, Length=161, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI25153583, Length=171, Percent_Identity=25.7309941520468, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71987612, Length=171, Percent_Identity=25.7309941520468, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17570161, Length=193, Percent_Identity=29.5336787564767, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI193210507, Length=165, Percent_Identity=28.4848484848485, Blast_Score=78, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI71987621, Length=171, Percent_Identity=25.7309941520468, Blast_Score=78, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI32566490, Length=154, Percent_Identity=30.5194805194805, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI71989963, Length=121, Percent_Identity=33.8842975206612, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI45550506, Length=267, Percent_Identity=33.3333333333333, Blast_Score=155, Evalue=2e-38,
Organism=Drosophila melanogaster, GI18860517, Length=207, Percent_Identity=33.8164251207729, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI21356845, Length=201, Percent_Identity=28.8557213930348, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI45556022, Length=197, Percent_Identity=32.994923857868, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI281361631, Length=192, Percent_Identity=28.125, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI281361633, Length=192, Percent_Identity=28.125, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI28573263, Length=207, Percent_Identity=27.0531400966184, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI62484448, Length=272, Percent_Identity=28.3088235294118, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI281365664, Length=272, Percent_Identity=28.3088235294118, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24657857, Length=272, Percent_Identity=28.3088235294118, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI62484274, Length=272, Percent_Identity=28.3088235294118, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI281361635, Length=127, Percent_Identity=29.1338582677165, Blast_Score=72, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 31417; Mature: 31417

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMNAGFVVTLAILVFVVVTIAKGVRIVPQGEEWIVERLGKYHGTLKPGLNIVIPYLDKV
CCCCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCCCCEEEEHHHHHH
SYQLVTKDIILDVQEQEVITRDNAVILTNAIAFIKVTDPVKAVYGVTDFSEAIRNLIMTT
HHHHHHHHHHHCCHHHHHHHCCCEEEEEEEEEEEEECCHHHHHHCHHHHHHHHHHHHHHH
LRSIVGEMELDEALSSRDKIKARLRESIADEAVDWGLTVKSVEIQDIKPSQSMQKAMEMQ
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHH
AAAERERKAVVTRSEGAKQSAILEAEARLESAKRDANAQVMLAEASAEAIRRITAAIGDQ
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCC
TGPMSYMLGEKYIAALERMGEKDNAKLVVLPADLQEAVRGLFGRKG
CCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCC
>Mature Secondary Structure
MDMNAGFVVTLAILVFVVVTIAKGVRIVPQGEEWIVERLGKYHGTLKPGLNIVIPYLDKV
CCCCCHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCCCCEEEEHHHHHH
SYQLVTKDIILDVQEQEVITRDNAVILTNAIAFIKVTDPVKAVYGVTDFSEAIRNLIMTT
HHHHHHHHHHHCCHHHHHHHCCCEEEEEEEEEEEEECCHHHHHHCHHHHHHHHHHHHHHH
LRSIVGEMELDEALSSRDKIKARLRESIADEAVDWGLTVKSVEIQDIKPSQSMQKAMEMQ
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHH
AAAERERKAVVTRSEGAKQSAILEAEARLESAKRDANAQVMLAEASAEAIRRITAAIGDQ
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCC
TGPMSYMLGEKYIAALERMGEKDNAKLVVLPADLQEAVRGLFGRKG
CCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]