| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is yceB [C]
Identifier: 71905881
GI number: 71905881
Start: 268096
End: 268647
Strand: Reverse
Name: yceB [C]
Synonym: Daro_0239
Alternate gene names: 71905881
Gene position: 268647-268096 (Counterclockwise)
Preceding gene: 71905882
Following gene: 71905879
Centisome position: 5.97
GC content: 61.96
Gene sequence:
>552_bases ATGAAACTCAAGTCAGTCCTGTTTGCAGCCAGCCTGCTGGCCGCCAATGCCTGCTGGAGCGTCGGCCTGCTCGAAAAGGA AATCTACTTTTCCGAAGCCGATATCCAGGCCCAGGTCGAGAAGAGCGGCACCATGCAGAAAAGTTACGGCAACGGCATGA TCGTCGTCGCCTTCATCGAACCGCCGAAAATCCAGCTCGGCAACCCGGAAGGCAAGGCTGCACTGTCTGCGCGCATCAAG GTCTCGCTCCTCGGCAACCCGCCGATTCCGGTGGACGTCCAGGGCACCTCCGGCCTGCGCTACGACGACAACGCCAAGGC CTTCTTCCTCGAAAACCCGGTGGCCAATTCGGTGCAGTCGCAAGCCCTGTCCCGCGAAAGCGAACCGATGGCCCGCCAGG CGATCACCCAGCTGATGACCGCCTATTTCCGCAGCAAGCCGGTCTATGTGCTGCGCGAAGACGGTTCGCTGCAGGAAAAG GCGGCTCGCTGGTTGCTGCGCTCCATCCGCATCGAGCCAGGTCGCGTCGCCGCCGTTCTCTCACCTGCCTGA
Upstream 100 bases:
>100_bases AGCTCGCGCTACTGATTGGCAGCTTCGAATTCGAAAAAGCACTCTCCCTGCTGCCTGCGGTAGACTCACAAGCCTCACCA TCATCCCCGCCCTAAACGCG
Downstream 100 bases:
>100_bases GGCCGCTCAGTCGGCCCCGAACTCACGGGCATACGGCTCGCGCAAATCGACTGGCCGGACGGCCTTCTTGCGCATGCGGA TGTTGAGCATCTCGACACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MKLKSVLFAASLLAANACWSVGLLEKEIYFSEADIQAQVEKSGTMQKSYGNGMIVVAFIEPPKIQLGNPEGKAALSARIK VSLLGNPPIPVDVQGTSGLRYDDNAKAFFLENPVANSVQSQALSRESEPMARQAITQLMTAYFRSKPVYVLREDGSLQEK AARWLLRSIRIEPGRVAAVLSPA
Sequences:
>Translated_183_residues MKLKSVLFAASLLAANACWSVGLLEKEIYFSEADIQAQVEKSGTMQKSYGNGMIVVAFIEPPKIQLGNPEGKAALSARIK VSLLGNPPIPVDVQGTSGLRYDDNAKAFFLENPVANSVQSQALSRESEPMARQAITQLMTAYFRSKPVYVLREDGSLQEK AARWLLRSIRIEPGRVAAVLSPA >Mature_183_residues MKLKSVLFAASLLAANACWSVGLLEKEIYFSEADIQAQVEKSGTMQKSYGNGMIVVAFIEPPKIQLGNPEGKAALSARIK VSLLGNPPIPVDVQGTSGLRYDDNAKAFFLENPVANSVQSQALSRESEPMARQAITQLMTAYFRSKPVYVLREDGSLQEK AARWLLRSIRIEPGRVAAVLSPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19910; Mature: 19910
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKSVLFAASLLAANACWSVGLLEKEIYFSEADIQAQVEKSGTMQKSYGNGMIVVAFIE CCHHHHHHHHHHHHHHHHHHHCCCHHHHEECCCCCEEEHHHCCCEEECCCCCEEEEEEEC PPKIQLGNPEGKAALSARIKVSLLGNPPIPVDVQGTSGLRYDDNAKAFFLENPVANSVQS CCCEEECCCCCCEEEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCEEEEECCHHHHHHH QALSRESEPMARQAITQLMTAYFRSKPVYVLREDGSLQEKAARWLLRSIRIEPGRVAAVL HHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEE SPA CCC >Mature Secondary Structure MKLKSVLFAASLLAANACWSVGLLEKEIYFSEADIQAQVEKSGTMQKSYGNGMIVVAFIE CCHHHHHHHHHHHHHHHHHHHCCCHHHHEECCCCCEEEHHHCCCEEECCCCCEEEEEEEC PPKIQLGNPEGKAALSARIKVSLLGNPPIPVDVQGTSGLRYDDNAKAFFLENPVANSVQS CCCEEECCCCCCEEEEEEEEEEEECCCCCEEEECCCCCCCCCCCCCEEEEECCHHHHHHH QALSRESEPMARQAITQLMTAYFRSKPVYVLREDGSLQEKAARWLLRSIRIEPGRVAAVL HHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEE SPA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA