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The map label for this gene is glpQ [H]

Identifier: 71905879

GI number: 71905879

Start: 265903

End: 267141

Strand: Reverse

Name: glpQ [H]

Synonym: Daro_0237

Alternate gene names: 71905879

Gene position: 267141-265903 (Counterclockwise)

Preceding gene: 71905881

Following gene: 71905878

Centisome position: 5.94

GC content: 64.33

Gene sequence:

>1239_bases
ATGCGCATGACACTGCCAACACTCGCCACGCTGCTGGTCGCGGGTGCCCTGAATCTGGCCGGCAGCACACCGGCACAGGC
CCATGACCACCACGGCGGACTCGACAACCGGGGGCCGCTGGTGGTCGGCCATCGGGGCACCGCAGGCTACCTGCCCGACC
ACACGCTCGAAGGCTACACGCTGGCCATCGAACTCGGCGCCGACTTCATCGAGCCAGACCTCGTTTCCACCAAGGATGGT
TACCTGATCGCCCGCCACGAACCGAACATCATCGCCACCACCGACGTCGCCAGCCGCCCCGAATTCGCTGCCCGCAAGCG
CACCCGCCTGGTCGATGGCGCGGCCGAGACCGGATTCTTCGCCTCCGACTTCACACTGGCCGAAATCAAGACCCTGCGGG
CAAAGCAGCCGATCCCGGCCGACCGGCCGACGCAATTTGACGGCAAATTCCAGATTCCGACCTTCGATGAAGTGATCGAA
CTGGCCAAGCGCAAATCTGCTGAAACCGGCCGCACCATCGGCATCTATCCGGAAACCAAGCACCCGACCTACCACCAGTC
CATTGGCCTGCCGCTGGAAGGCAAACTGCTCGCAGCGCTGACCCGAGCCGGCTGGAACAACCGCCACGCTCCGGTCTTCA
TCCAGAGTTTCGAGCAGGCCAACCTGAAAGCGCTGAGCAAACTGACCAAGGTCCGCCTGATCCAGCTGGTCGACGCCGAC
GACGTCAACGCGGATGGCAGCCTGGCCTACAACGCACCGTTCGACCGCCCGTACGACTGGACGGCCTCCGGCAAGCCGGA
ACTGCTGGCCCGCACCTTCGGCTGGTTCGCCACCGATGCCGGCCTCGATGAAGTCGCCACCTACGCCTACGGTATCAGCC
CCTGGAAGCGCTACATCGTCAGCACCGTTGATGCCGGCGCCAGCGGCCCAGGTGAAGCAAGTCGCACCCTGAGCACGCCG
ACCGACCTGATCGAACGTGCCCACGCCCGCGGCCTCAAGGTGCACACCTGGACCTTCCGTAACGAGCAGCGCCGCCTGGC
CAGCGACTACACCGGCAACCCGGTCAATGAGTACCTGCAGTTCTACCGTCTCGGTATCGATGGCGTCTTTTCTGATTTTG
CCGATACCGCTGTTGCCGCCCGCACGCTGTTCAAGCTGGAACAGGACGGCTACAACAAATGCTTTACCGGCAGCGGTCTG
AACCGCGCCGAACTGCGCGCCTGCGCCGCTGGCGAGTAA

Upstream 100 bases:

>100_bases
AACCCGAAGTGTTCCAGCGCCCATCGTTCGTCATCTCAACGTCATAGACGATTCATGACATCGGACTATTCTTGAGCCTC
CCCCACAAAAGGAGCTCGAC

Downstream 100 bases:

>100_bases
TCGCCGAAAGCCGGACGCCATTGCCATCCGGGTACTGGGCCGCCTCGTTTCGGGCGGCCATTTTGGTTTCAATTCAGTGC
AGCAATCGCCTCTCCAGCAC

Product: glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MRMTLPTLATLLVAGALNLAGSTPAQAHDHHGGLDNRGPLVVGHRGTAGYLPDHTLEGYTLAIELGADFIEPDLVSTKDG
YLIARHEPNIIATTDVASRPEFAARKRTRLVDGAAETGFFASDFTLAEIKTLRAKQPIPADRPTQFDGKFQIPTFDEVIE
LAKRKSAETGRTIGIYPETKHPTYHQSIGLPLEGKLLAALTRAGWNNRHAPVFIQSFEQANLKALSKLTKVRLIQLVDAD
DVNADGSLAYNAPFDRPYDWTASGKPELLARTFGWFATDAGLDEVATYAYGISPWKRYIVSTVDAGASGPGEASRTLSTP
TDLIERAHARGLKVHTWTFRNEQRRLASDYTGNPVNEYLQFYRLGIDGVFSDFADTAVAARTLFKLEQDGYNKCFTGSGL
NRAELRACAAGE

Sequences:

>Translated_412_residues
MRMTLPTLATLLVAGALNLAGSTPAQAHDHHGGLDNRGPLVVGHRGTAGYLPDHTLEGYTLAIELGADFIEPDLVSTKDG
YLIARHEPNIIATTDVASRPEFAARKRTRLVDGAAETGFFASDFTLAEIKTLRAKQPIPADRPTQFDGKFQIPTFDEVIE
LAKRKSAETGRTIGIYPETKHPTYHQSIGLPLEGKLLAALTRAGWNNRHAPVFIQSFEQANLKALSKLTKVRLIQLVDAD
DVNADGSLAYNAPFDRPYDWTASGKPELLARTFGWFATDAGLDEVATYAYGISPWKRYIVSTVDAGASGPGEASRTLSTP
TDLIERAHARGLKVHTWTFRNEQRRLASDYTGNPVNEYLQFYRLGIDGVFSDFADTAVAARTLFKLEQDGYNKCFTGSGL
NRAELRACAAGE
>Mature_412_residues
MRMTLPTLATLLVAGALNLAGSTPAQAHDHHGGLDNRGPLVVGHRGTAGYLPDHTLEGYTLAIELGADFIEPDLVSTKDG
YLIARHEPNIIATTDVASRPEFAARKRTRLVDGAAETGFFASDFTLAEIKTLRAKQPIPADRPTQFDGKFQIPTFDEVIE
LAKRKSAETGRTIGIYPETKHPTYHQSIGLPLEGKLLAALTRAGWNNRHAPVFIQSFEQANLKALSKLTKVRLIQLVDAD
DVNADGSLAYNAPFDRPYDWTASGKPELLARTFGWFATDAGLDEVATYAYGISPWKRYIVSTVDAGASGPGEASRTLSTP
TDLIERAHARGLKVHTWTFRNEQRRLASDYTGNPVNEYLQFYRLGIDGVFSDFADTAVAARTLFKLEQDGYNKCFTGSGL
NRAELRACAAGE

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Escherichia coli, GI1788572, Length=393, Percent_Identity=29.2620865139949, Blast_Score=154, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 45011; Mature: 45011

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMTLPTLATLLVAGALNLAGSTPAQAHDHHGGLDNRGPLVVGHRGTAGYLPDHTLEGYT
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEE
LAIELGADFIEPDLVSTKDGYLIARHEPNIIATTDVASRPEFAARKRTRLVDGAAETGFF
EEEEECCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCE
ASDFTLAEIKTLRAKQPIPADRPTQFDGKFQIPTFDEVIELAKRKSAETGRTIGIYPETK
ECCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCEEEECCCCC
HPTYHQSIGLPLEGKLLAALTRAGWNNRHAPVFIQSFEQANLKALSKLTKVRLIQLVDAD
CCCHHHHCCCCCCCHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHEEEEECCC
DVNADGSLAYNAPFDRPYDWTASGKPELLARTFGWFATDAGLDEVATYAYGISPWKRYIV
CCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHH
STVDAGASGPGEASRTLSTPTDLIERAHARGLKVHTWTFRNEQRRLASDYTGNPVNEYLQ
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCCCCHHHHHH
FYRLGIDGVFSDFADTAVAARTLFKLEQDGYNKCFTGSGLNRAELRACAAGE
HHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHCCCC
>Mature Secondary Structure
MRMTLPTLATLLVAGALNLAGSTPAQAHDHHGGLDNRGPLVVGHRGTAGYLPDHTLEGYT
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEE
LAIELGADFIEPDLVSTKDGYLIARHEPNIIATTDVASRPEFAARKRTRLVDGAAETGFF
EEEEECCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCE
ASDFTLAEIKTLRAKQPIPADRPTQFDGKFQIPTFDEVIELAKRKSAETGRTIGIYPETK
ECCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCEEEECCCCC
HPTYHQSIGLPLEGKLLAALTRAGWNNRHAPVFIQSFEQANLKALSKLTKVRLIQLVDAD
CCCHHHHCCCCCCCHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHHEEEEECCC
DVNADGSLAYNAPFDRPYDWTASGKPELLARTFGWFATDAGLDEVATYAYGISPWKRYIV
CCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHH
STVDAGASGPGEASRTLSTPTDLIERAHARGLKVHTWTFRNEQRRLASDYTGNPVNEYLQ
HHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCHHHHHHHCCCCCCHHHHHH
FYRLGIDGVFSDFADTAVAARTLFKLEQDGYNKCFTGSGLNRAELRACAAGE
HHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1851953; 9205837; 9278503; 3329281; 8899705 [H]