| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71905878
Identifier: 71905878
GI number: 71905878
Start: 265270
End: 265692
Strand: Reverse
Name: 71905878
Synonym: Daro_0236
Alternate gene names: NA
Gene position: 265692-265270 (Counterclockwise)
Preceding gene: 71905879
Following gene: 71905877
Centisome position: 5.9
GC content: 63.83
Gene sequence:
>423_bases ATGGACAGCAAGACCCTACTGGGCCAGGAGTGGCAAACCCTGCAGAACAATCACGAACAGCATGAGCGCAACGCCCTGTG CATCAAGCTGGTCTGCCTCGCGCTTTGCCTCGTGGGCCTGGCGCTCCGGGCGCCCCCGGTGTGGATCGGCATTACGGTGC TACTCTGCTGGGCGCAGGAAGGCATCTACAAAACCTACCAAGCCAGACTCGCCGAACGTCTGCTGCGCGTCGAATCGCTG CTCGGGCAAGCGGAAGCAACGCAAGCGAGCATGCAACTCCATACCGAGTGGACAGCCAGCCGCCCCGGCTGCACCGGCCT GATCGGCAGCTACGCGATCAGCGCCTGCCGGCCGACCGTGGCCTTTCCCTACCTGCCCATCGTCCTGATGCTATTGGTCG GCCGCTGGCTGACCTGGTTCTGA
Upstream 100 bases:
>100_bases TTTGCGCACCTTGCCATAAGCAGCGCCTTTGGCGTACATCTGCGACGCAAACGGCTATCCTTGCAGCAGCAGCCTCGCAA GCAACCAAGGACAATGGCGC
Downstream 100 bases:
>100_bases ATGACAACACCACCAAGGAAGCCTTGAATGAGCCATGCCAAATCGCGCGAAGTAACGCTCCCGCTCAAGATCACTGAAGA ACTGGGACTAAGCCTCGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MDSKTLLGQEWQTLQNNHEQHERNALCIKLVCLALCLVGLALRAPPVWIGITVLLCWAQEGIYKTYQARLAERLLRVESL LGQAEATQASMQLHTEWTASRPGCTGLIGSYAISACRPTVAFPYLPIVLMLLVGRWLTWF
Sequences:
>Translated_140_residues MDSKTLLGQEWQTLQNNHEQHERNALCIKLVCLALCLVGLALRAPPVWIGITVLLCWAQEGIYKTYQARLAERLLRVESL LGQAEATQASMQLHTEWTASRPGCTGLIGSYAISACRPTVAFPYLPIVLMLLVGRWLTWF >Mature_140_residues MDSKTLLGQEWQTLQNNHEQHERNALCIKLVCLALCLVGLALRAPPVWIGITVLLCWAQEGIYKTYQARLAERLLRVESL LGQAEATQASMQLHTEWTASRPGCTGLIGSYAISACRPTVAFPYLPIVLMLLVGRWLTWF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15710; Mature: 15710
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSKTLLGQEWQTLQNNHEQHERNALCIKLVCLALCLVGLALRAPPVWIGITVLLCWAQE CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GIYKTYQARLAERLLRVESLLGQAEATQASMQLHTEWTASRPGCTGLIGSYAISACRPTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCH AFPYLPIVLMLLVGRWLTWF HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDSKTLLGQEWQTLQNNHEQHERNALCIKLVCLALCLVGLALRAPPVWIGITVLLCWAQE CCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH GIYKTYQARLAERLLRVESLLGQAEATQASMQLHTEWTASRPGCTGLIGSYAISACRPTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCH AFPYLPIVLMLLVGRWLTWF HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA