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The map label for this gene is mreD [C]

Identifier: 71905756

GI number: 71905756

Start: 131425

End: 131946

Strand: Reverse

Name: mreD [C]

Synonym: Daro_0114

Alternate gene names: 71905756

Gene position: 131946-131425 (Counterclockwise)

Preceding gene: 71905757

Following gene: 71905755

Centisome position: 2.93

GC content: 62.84

Gene sequence:

>522_bases
ATGCAACCAACCTTTTCCTCATCCCGCATTCTGTTGCCGGTCCGGCCTTGGTTCATATTCTTCAGCCTGATCGCCGCCGC
GCTCCTCAACTTCCTGCCAACGGCACACTGGCCAGGGATGCCGGACTGGATTGCACTGGTCCTGTGTTTCTGGAGCGTTC
GAGAGTTCCGCAAGGTCGGCATGGGCTGGGGCTTCGCACTCGGTCTGCTGATGGATGTCGCCGATGGCGCGGTGCTTGGC
CAGCATTGCTTCGCCTACGTGATACTGGCCTACACCGCGGCCTCGCTGTCACGGCGCATCCTCTGGTTCCCGCTCGTCCA
GCAGGCCCTGCAAATCATGCCGCTCTTACTCGCGGCGCAGGTATTGCAGGCCTTGATGCGCCTTGCCGTGGGCGCCGACT
TCCCCGGCTGGGGCTATTTCGTGGGCCCGTTGATCGCTACGCTGCTCTGGATTCCCGCCACCTTCATCCTGCTCCTGCCG
CAGTACCGGCCGGTCGAGCAAGACCCCAACCGCCCGATTTGA

Upstream 100 bases:

>100_bases
AGGCGCTGCCGCCGGCACCGCCAGAGTCATCCGGACGTCCGGGCAGTTCCGACAAACCAAGCCTGCGCAAGAAAAAGAAA
ACCGCTGGAAAAGAACACTG

Downstream 100 bases:

>100_bases
TGCTAAGGCAGGCTGCACGTGGGTGATTTCAATAATCCGGAAGCCGATCTCGACCGTTTTCGGTTTCGGATCGGTTTTGC
GGCGGTAACCGTCCTGCTGG

Product: rod shape-determining protein MreD

Products: NA

Alternate protein names: Rod Shape-Determining MreD Transmembrane Protein; Rod Shape-Determining Protein; MreD Rod Shape-Determining Protein; Rod Shape-Determining MreD; Rod Shape-Determining Protein Mred; Rod Shape-Determining MRED Transmembrane Protein

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MQPTFSSSRILLPVRPWFIFFSLIAAALLNFLPTAHWPGMPDWIALVLCFWSVREFRKVGMGWGFALGLLMDVADGAVLG
QHCFAYVILAYTAASLSRRILWFPLVQQALQIMPLLLAAQVLQALMRLAVGADFPGWGYFVGPLIATLLWIPATFILLLP
QYRPVEQDPNRPI

Sequences:

>Translated_173_residues
MQPTFSSSRILLPVRPWFIFFSLIAAALLNFLPTAHWPGMPDWIALVLCFWSVREFRKVGMGWGFALGLLMDVADGAVLG
QHCFAYVILAYTAASLSRRILWFPLVQQALQIMPLLLAAQVLQALMRLAVGADFPGWGYFVGPLIATLLWIPATFILLLP
QYRPVEQDPNRPI
>Mature_173_residues
MQPTFSSSRILLPVRPWFIFFSLIAAALLNFLPTAHWPGMPDWIALVLCFWSVREFRKVGMGWGFALGLLMDVADGAVLG
QHCFAYVILAYTAASLSRRILWFPLVQQALQIMPLLLAAQVLQALMRLAVGADFPGWGYFVGPLIATLLWIPATFILLLP
QYRPVEQDPNRPI

Specific function: Involved In Formation Of The Rod Shape Of The Cell. May Also Contribute To Regulation Of Formation Of Penicillin-Binding Proteins. [C]

COG id: COG2891

COG function: function code M; Cell shape-determining protein

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19428; Mature: 19428

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPTFSSSRILLPVRPWFIFFSLIAAALLNFLPTAHWPGMPDWIALVLCFWSVREFRKVG
CCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHC
MGWGFALGLLMDVADGAVLGQHCFAYVILAYTAASLSRRILWFPLVQQALQIMPLLLAAQ
CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLQALMRLAVGADFPGWGYFVGPLIATLLWIPATFILLLPQYRPVEQDPNRPI
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQPTFSSSRILLPVRPWFIFFSLIAAALLNFLPTAHWPGMPDWIALVLCFWSVREFRKVG
CCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHC
MGWGFALGLLMDVADGAVLGQHCFAYVILAYTAASLSRRILWFPLVQQALQIMPLLLAAQ
CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLQALMRLAVGADFPGWGYFVGPLIATLLWIPATFILLLPQYRPVEQDPNRPI
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA